RNA–Protein interactions for RNA: ENST00000457754.6

RUFY4-203, Transcript of RUN and FYVE domain containing 4, humanhuman

TSL 2

Gene RUFY4, Length 3,568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4-203ENST00000457754 NISCHQ9Y2I1 1504 aa19.62■□□□□ 0.73
RUFY4-203ENST00000457754 DCAF8L2P0C7V8 631 aa18.21■□□□□ 0.51
RUFY4-203ENST00000457754 SHROOM4Q9ULL8 1493 aa17.85■□□□□ 0.45
RUFY4-203ENST00000457754 SUPT5HO00267 1087 aaKnown RBP17.74■□□□□ 0.43
RUFY4-203ENST00000457754 PCGF6Q9BYE7 350 aa17.23■□□□□ 0.35
RUFY4-203ENST00000457754 HRCP23327 699 aa17.13■□□□□ 0.33
RUFY4-203ENST00000457754 PPARGC1BQ86YN6 1023 aaKnown RBP17.12■□□□□ 0.33
RUFY4-203ENST00000457754 CHIC1Q5VXU3 224 aa16.99■□□□□ 0.31
RUFY4-203ENST00000457754 MYO15BQ96JP2 1530 aa16.9■□□□□ 0.3
RUFY4-203ENST00000457754 LOC105371045A0A1W2PR82 267 aa16.84■□□□□ 0.29
RUFY4-203ENST00000457754 PELP1Q8IZL8 1130 aaKnown RBP16.81■□□□□ 0.28
RUFY4-203ENST00000457754 EHMT2Q96KQ7 1210 aa16.72■□□□□ 0.27
RUFY4-203ENST00000457754 FAM9AQ8IZU1 332 aaPredicted RBP16.54■□□□□ 0.24
RUFY4-203ENST00000457754 ABCC9O60706 1549 aa16.53■□□□□ 0.24
RUFY4-203ENST00000457754 ZCCHC6Q5VYS8 1495 aaKnown RBP16.47■□□□□ 0.23
RUFY4-203ENST00000457754 TRIM26Q12899 539 aaPredicted RBP16.45■□□□□ 0.22
RUFY4-203ENST00000457754 MYT1Q01538 1121 aa16.29■□□□□ 0.2
RUFY4-203ENST00000457754 CCDC180Q9P1Z9 1646 aa16.28■□□□□ 0.2
RUFY4-203ENST00000457754 DCAF1Q9Y4B6 1507 aa16.26■□□□□ 0.19
RUFY4-203ENST00000457754 TRIM41Q8WV44 630 aa16.26■□□□□ 0.19
RUFY4-203ENST00000457754 TTBK1Q5TCY1 1321 aaPredicted RBP16.21■□□□□ 0.19
RUFY4-203ENST00000457754 SCAF1Q9H7N4 1312 aaKnown RBP16.16■□□□□ 0.18
RUFY4-203ENST00000457754 ZEB1P37275 1124 aaPredicted RBP16.15■□□□□ 0.18
RUFY4-203ENST00000457754 PABPN1Q86U42 306 aaKnown RBP eCLIP16.15■□□□□ 0.18
RUFY4-203ENST00000457754 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.06■□□□□ 0.16
RUFY4-203ENST00000457754 SCRIBQ14160 1630 aa16.02■□□□□ 0.16
RUFY4-203ENST00000457754 CCER1Q8TC90 406 aaPredicted RBP16.02■□□□□ 0.16
RUFY4-203ENST00000457754 NEUROD1Q13562 356 aa15.87■□□□□ 0.13
RUFY4-203ENST00000457754 RANGAP1P46060 587 aaPredicted RBP15.86■□□□□ 0.13
RUFY4-203ENST00000457754 YTHDC1Q96MU7 727 aaKnown RBP15.85■□□□□ 0.13
RUFY4-203ENST00000457754 GTF3C3Q9Y5Q9 886 aa15.84■□□□□ 0.13
RUFY4-203ENST00000457754 ACIN1Q9UKV3 1341 aaKnown RBP15.81■□□□□ 0.12
RUFY4-203ENST00000457754 DIEXFQ68CQ4 756 aaKnown RBP15.79■□□□□ 0.12
RUFY4-203ENST00000457754 RSF1Q96T23 1441 aaPredicted RBP15.75■□□□□ 0.11
RUFY4-203ENST00000457754 CENPBP07199 599 aaPredicted RBP15.75■□□□□ 0.11
RUFY4-203ENST00000457754 RB1CC1Q8TDY2 1594 aa15.65■□□□□ 0.1
RUFY4-203ENST00000457754 UBTFP17480 764 aaKnown RBP15.65■□□□□ 0.1
RUFY4-203ENST00000457754 CECR2Q9BXF3 1484 aa15.61■□□□□ 0.09
RUFY4-203ENST00000457754 HNRNPUL2Q1KMD3 747 aaKnown RBP15.55■□□□□ 0.08
RUFY4-203ENST00000457754 NACADO15069 1562 aa15.5■□□□□ 0.07
RUFY4-203ENST00000457754 ZNF316A6NFI3 1004 aaPredicted RBP15.45■□□□□ 0.06
RUFY4-203ENST00000457754 MIER1Q8N108 512 aa15.41■□□□□ 0.06
RUFY4-203ENST00000457754 APLP2Q06481 763 aa15.39■□□□□ 0.05
RUFY4-203ENST00000457754 BCL11AQ9H165 835 aa15.37■□□□□ 0.05
RUFY4-203ENST00000457754 MROH2BQ7Z745 1585 aa15.37■□□□□ 0.05
RUFY4-203ENST00000457754 ATP1B4Q9UN42 357 aaPredicted RBP15.33■□□□□ 0.04
RUFY4-203ENST00000457754 CEP162Q5TB80 1403 aa15.29■□□□□ 0.04
RUFY4-203ENST00000457754 WIZO95785 1651 aa15.26■□□□□ 0.03
RUFY4-203ENST00000457754 CSRNP3Q8WYN3 585 aa15.26■□□□□ 0.03
RUFY4-203ENST00000457754 ABCC8Q09428 1581 aa15.25■□□□□ 0.03
RUFY4-203ENST00000457754 SOGA1O94964 1423 aa15.25■□□□□ 0.03
RUFY4-203ENST00000457754 CCDC88BA6NC98 1476 aa15.24■□□□□ 0.03
RUFY4-203ENST00000457754 PRKCSHP14314 528 aaPredicted RBP15.2■□□□□ 0.02
RUFY4-203ENST00000457754 ITGAEP38570 1179 aa15.15■□□□□ 0.02
RUFY4-203ENST00000457754 RUSC2Q8N2Y8 1516 aa15.15■□□□□ 0.02
RUFY4-203ENST00000457754 BAZ1AQ9NRL2 1556 aaPredicted RBP15.14■□□□□ 0.01
RUFY4-203ENST00000457754 BCANQ96GW7 911 aa15.11■□□□□ 0.01
RUFY4-203ENST00000457754 TNIKQ9UKE5 1360 aa15.09■□□□□ 0.01
RUFY4-203ENST00000457754 WRNQ14191 1432 aaPredicted RBP eCLIP15.03■□□□□ -0
RUFY4-203ENST00000457754 BAZ1BQ9UIG0 1483 aaKnown RBP15.01□□□□□ -0.01
RUFY4-203ENST00000457754 P3H3Q8IVL6 736 aa14.99□□□□□ -0.01
RUFY4-203ENST00000457754 SUPT16HQ9Y5B9 1047 aaKnown RBP14.99□□□□□ -0.01
RUFY4-203ENST00000457754 CLIP1P30622 1438 aa14.97□□□□□ -0.01
RUFY4-203ENST00000457754 GOLGA3Q08378 1498 aa14.95□□□□□ -0.02
RUFY4-203ENST00000457754 KCNH8Q96L42 1107 aa14.93□□□□□ -0.02
RUFY4-203ENST00000457754 ANP32EQ9BTT0 268 aa14.91□□□□□ -0.02
RUFY4-203ENST00000457754 SMARCA4P51532 1647 aa14.9□□□□□ -0.02
RUFY4-203ENST00000457754 HIRIP3Q9BW71 556 aaPredicted RBP14.87□□□□□ -0.03
RUFY4-203ENST00000457754 KANK4Q5T7N3 995 aaPredicted RBP14.85□□□□□ -0.03
RUFY4-203ENST00000457754 TSHZ2Q9NRE2 1034 aa14.84□□□□□ -0.03
RUFY4-203ENST00000457754 TOP2AP11388 1531 aaKnown RBP14.84□□□□□ -0.03
RUFY4-203ENST00000457754 FKBP8Q14318 412 aa14.84□□□□□ -0.03
RUFY4-203ENST00000457754 EEA1Q15075 1411 aa14.84□□□□□ -0.03
RUFY4-203ENST00000457754 ARID3CA6NKF2 412 aa14.83□□□□□ -0.03
RUFY4-203ENST00000457754 DDX10Q13206 875 aaKnown RBP14.83□□□□□ -0.04
RUFY4-203ENST00000457754 ATAD2BQ9ULI0 1458 aa14.83□□□□□ -0.04
RUFY4-203ENST00000457754 SMARCA2P51531 1590 aa14.81□□□□□ -0.04
RUFY4-203ENST00000457754 EIF4G1Q04637 1599 aaKnown RBP14.79□□□□□ -0.04
RUFY4-203ENST00000457754 VPS8Q8N3P4 1428 aa14.79□□□□□ -0.04
RUFY4-203ENST00000457754 CEP164Q9UPV0 1460 aa14.79□□□□□ -0.04
RUFY4-203ENST00000457754 TRIM52Q96A61 297 aa14.78□□□□□ -0.04
RUFY4-203ENST00000457754 ERICH6Q7L0X2 663 aa14.78□□□□□ -0.04
RUFY4-203ENST00000457754 RAPGEF2Q9Y4G8 1499 aa14.77□□□□□ -0.04
RUFY4-203ENST00000457754 DHX57Q6P158 1386 aaKnown RBP14.76□□□□□ -0.05
RUFY4-203ENST00000457754 FBLN2P98095 1184 aa14.76□□□□□ -0.05
RUFY4-203ENST00000457754 NEFLP07196 543 aa14.75□□□□□ -0.05
RUFY4-203ENST00000457754 FAM50AQ14320 339 aaKnown RBP14.75□□□□□ -0.05
RUFY4-203ENST00000457754 BICRAQ9NZM4 1560 aa14.72□□□□□ -0.05
RUFY4-203ENST00000457754 SIN3AQ96ST3 1273 aa14.71□□□□□ -0.05
RUFY4-203ENST00000457754 IRX6P78412 446 aaPredicted RBP14.66□□□□□ -0.06
RUFY4-203ENST00000457754 CLSPNQ9HAW4 1339 aa14.64□□□□□ -0.07
RUFY4-203ENST00000457754 UNC13AQ9UPW8 1703 aa14.64□□□□□ -0.07
RUFY4-203ENST00000457754 SYNJ1O43426 1573 aa14.63□□□□□ -0.07
RUFY4-203ENST00000457754 DNAJC5BQ9UF47 199 aa14.62□□□□□ -0.07
RUFY4-203ENST00000457754 KIF21BO75037 1637 aa14.61□□□□□ -0.07
RUFY4-203ENST00000457754 CNGB1Q14028 1251 aaPredicted RBP14.59□□□□□ -0.07
RUFY4-203ENST00000457754 ANP32CO43423 234 aa14.58□□□□□ -0.08
RUFY4-203ENST00000457754 RBM19Q9Y4C8 960 aaKnown RBP14.58□□□□□ -0.08
RUFY4-203ENST00000457754 CCNB3Q8WWL7 1395 aa14.56□□□□□ -0.08
RUFY4-203ENST00000457754 KIF27Q86VH2 1401 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms