RNA–Protein interactions for RNA: ENST00000457628.1

LINC01053-201, Transcript of long intergenic non-protein coding RNA 1053, humanhuman

TSL 2 BASIC

Gene LINC01053, Length 771 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01053-201ENST00000457628 CHD1O14646 1710 aa13.86□□□□□ -0.19
LINC01053-201ENST00000457628 RSF1Q96T23 1441 aaPredicted RBP13.85□□□□□ -0.19
LINC01053-201ENST00000457628 ZNF608Q9ULD9 1512 aaPredicted RBP13.85□□□□□ -0.19
LINC01053-201ENST00000457628 EIF4G3O43432 1585 aaKnown RBP13.79□□□□□ -0.2
LINC01053-201ENST00000457628 ABCC8Q09428 1581 aa13.76□□□□□ -0.21
LINC01053-201ENST00000457628 FBLN2P98095 1184 aa13.76□□□□□ -0.21
LINC01053-201ENST00000457628 TOPBP1Q92547 1522 aa13.72□□□□□ -0.21
LINC01053-201ENST00000457628 TOP2AP11388 1531 aaKnown RBP13.68□□□□□ -0.22
LINC01053-201ENST00000457628 AQRO60306 1485 aaKnown RBP eCLIP13.67□□□□□ -0.22
LINC01053-201ENST00000457628 TARBP1Q13395 1621 aaKnown RBP13.64□□□□□ -0.23
LINC01053-201ENST00000457628 DNMBPQ6XZF7 1577 aa13.64□□□□□ -0.23
LINC01053-201ENST00000457628 SYNJ1O43426 1573 aa13.62□□□□□ -0.23
LINC01053-201ENST00000457628 CLASP1Q7Z460 1538 aa13.61□□□□□ -0.23
LINC01053-201ENST00000457628 SUPT5HO00267 1087 aaKnown RBP13.61□□□□□ -0.23
LINC01053-201ENST00000457628 ZBTB12Q9Y330 459 aaPredicted RBP13.61□□□□□ -0.23
LINC01053-201ENST00000457628 MKRN4PQ13434 485 aaPredicted RBP13.6□□□□□ -0.23
LINC01053-201ENST00000457628 CHMP7Q8WUX9 453 aaPredicted RBP13.59□□□□□ -0.23
LINC01053-201ENST00000457628 ILDR1Q86SU0 546 aaPredicted RBP13.56□□□□□ -0.24
LINC01053-201ENST00000457628 WDR97A6NE52 1622 aa13.56□□□□□ -0.24
LINC01053-201ENST00000457628 GAPVD1Q14C86 1478 aa13.54□□□□□ -0.24
LINC01053-201ENST00000457628 POLA1P09884 1462 aaPredicted RBP13.52□□□□□ -0.25
LINC01053-201ENST00000457628 MAGI1Q96QZ7 1491 aaPredicted RBP13.52□□□□□ -0.25
LINC01053-201ENST00000457628 CCDC88BA6NC98 1476 aa13.51□□□□□ -0.25
LINC01053-201ENST00000457628 SNAPC4Q5SXM2 1469 aa13.51□□□□□ -0.25
LINC01053-201ENST00000457628 TDRD9Q8NDG6 1382 aaKnown RBP13.5□□□□□ -0.25
LINC01053-201ENST00000457628 SOGA1O94964 1423 aa13.49□□□□□ -0.25
LINC01053-201ENST00000457628 KIF13AQ9H1H9 1805 aa13.48□□□□□ -0.25
LINC01053-201ENST00000457628 SYNJ2O15056 1496 aa13.47□□□□□ -0.25
LINC01053-201ENST00000457628 RAD54L2Q9Y4B4 1467 aa13.47□□□□□ -0.25
LINC01053-201ENST00000457628 GRIN2BQ13224 1484 aa13.44□□□□□ -0.26
LINC01053-201ENST00000457628 PBRM1Q86U86 1689 aa13.39□□□□□ -0.27
LINC01053-201ENST00000457628 FGD5Q6ZNL6 1462 aa13.36□□□□□ -0.27
LINC01053-201ENST00000457628 KDM4FA0A1W2PPD8 638 aa13.35□□□□□ -0.27
LINC01053-201ENST00000457628 ERCC6L2Q5T890 1561 aa13.31□□□□□ -0.28
LINC01053-201ENST00000457628 FAM69CQ0P6D2 419 aa13.3□□□□□ -0.28
LINC01053-201ENST00000457628 CEP170Q5SW79 1584 aa13.29□□□□□ -0.28
LINC01053-201ENST00000457628 NPM1P06748 294 aaKnown RBP eCLIP13.29□□□□□ -0.28
LINC01053-201ENST00000457628 FKBP8Q14318 412 aa13.29□□□□□ -0.28
LINC01053-201ENST00000457628 KDM6BO15054 1643 aa13.28□□□□□ -0.28
LINC01053-201ENST00000457628 SPDYE2BA6NHP3 402 aa13.27□□□□□ -0.29
LINC01053-201ENST00000457628 SPDYE4A6NLX3 237 aa13.27□□□□□ -0.29
LINC01053-201ENST00000457628 SPDYE6P0CI01 402 aa13.27□□□□□ -0.29
LINC01053-201ENST00000457628 SPDYE2Q495Y8 402 aa13.27□□□□□ -0.29
LINC01053-201ENST00000457628 SHROOM2Q13796 1616 aa13.27□□□□□ -0.29
LINC01053-201ENST00000457628 ABCC10Q5T3U5 1492 aa13.26□□□□□ -0.29
LINC01053-201ENST00000457628 RBM42Q9BTD8 480 aaKnown RBP13.26□□□□□ -0.29
LINC01053-201ENST00000457628 GRIN2AQ12879 1464 aa13.25□□□□□ -0.29
LINC01053-201ENST00000457628 TSPOAP1O95153 1857 aa13.25□□□□□ -0.29
LINC01053-201ENST00000457628 ZNF692Q9BU19 519 aaPredicted RBP13.24□□□□□ -0.29
LINC01053-201ENST00000457628 CUX1P39880 1505 aa13.23□□□□□ -0.29
LINC01053-201ENST00000457628 ABCA5Q8WWZ7 1642 aa13.23□□□□□ -0.29
LINC01053-201ENST00000457628 NUP160Q12769 1436 aa13.22□□□□□ -0.29
LINC01053-201ENST00000457628 MAPKBP1O60336 1514 aa13.21□□□□□ -0.29
LINC01053-201ENST00000457628 ABCA10Q8WWZ4 1543 aa13.19□□□□□ -0.3
LINC01053-201ENST00000457628 DIP2BQ9P265 1576 aa13.19□□□□□ -0.3
LINC01053-201ENST00000457628 SSUH2Q9Y2M2 353 aa13.18□□□□□ -0.3
LINC01053-201ENST00000457628 ADAMTS12P58397 1594 aa13.15□□□□□ -0.3
LINC01053-201ENST00000457628 PRG4Q92954 1404 aaPredicted RBP13.15□□□□□ -0.3
LINC01053-201ENST00000457628 JPH4Q96JJ6 628 aa13.14□□□□□ -0.31
LINC01053-201ENST00000457628 FHAD1B1AJZ9 1412 aa13.13□□□□□ -0.31
LINC01053-201ENST00000457628 HECW2Q9P2P5 1572 aa13.12□□□□□ -0.31
LINC01053-201ENST00000457628 FBXO41Q8TF61 875 aa13.12□□□□□ -0.31
LINC01053-201ENST00000457628 AKT1S1Q96B36 256 aa13.11□□□□□ -0.31
LINC01053-201ENST00000457628 ADGRL1O94910 1474 aa13.1□□□□□ -0.31
LINC01053-201ENST00000457628 ADCY10Q96PN6 1610 aa13.07□□□□□ -0.32
LINC01053-201ENST00000457628 ERICH3Q5RHP9 1530 aa13.05□□□□□ -0.32
LINC01053-201ENST00000457628 WRNQ14191 1432 aaPredicted RBP eCLIP13.05□□□□□ -0.32
LINC01053-201ENST00000457628 PROM2Q8N271 834 aa13.04□□□□□ -0.32
LINC01053-201ENST00000457628 REM2Q8IYK8 340 aaPredicted RBP13.01□□□□□ -0.33
LINC01053-201ENST00000457628 PPRC1Q5VV67 1664 aaKnown RBP12.99□□□□□ -0.33
LINC01053-201ENST00000457628 TOP2BQ02880 1626 aa12.98□□□□□ -0.33
LINC01053-201ENST00000457628 GLI2P10070 1586 aa12.98□□□□□ -0.33
LINC01053-201ENST00000457628 RUSC2Q8N2Y8 1516 aa12.98□□□□□ -0.33
LINC01053-201ENST00000457628 PLB1Q6P1J6 1458 aa12.94□□□□□ -0.34
LINC01053-201ENST00000457628 BIVM-ERCC5R4GMW8 1640 aa12.94□□□□□ -0.34
LINC01053-201ENST00000457628 TEX14Q8IWB6 1497 aa12.91□□□□□ -0.34
LINC01053-201ENST00000457628 LMTK3Q96Q04 1460 aa12.91□□□□□ -0.34
LINC01053-201ENST00000457628 PTPRGP23470 1445 aa12.9□□□□□ -0.34
LINC01053-201ENST00000457628 ASXL2Q76L83 1435 aa12.89□□□□□ -0.35
LINC01053-201ENST00000457628 KIAA0586Q9BVV6 1533 aa12.89□□□□□ -0.35
LINC01053-201ENST00000457628 ABCC2Q92887 1545 aa12.88□□□□□ -0.35
LINC01053-201ENST00000457628 SPDYE1Q8NFV5 336 aaPredicted RBP12.88□□□□□ -0.35
LINC01053-201ENST00000457628 CUL7Q14999 1698 aa12.88□□□□□ -0.35
LINC01053-201ENST00000457628 MAP3K4Q9Y6R4 1608 aa12.88□□□□□ -0.35
LINC01053-201ENST00000457628 COL17A1Q9UMD9 1497 aaPredicted RBP12.87□□□□□ -0.35
LINC01053-201ENST00000457628 PITPNM1O00562 1244 aa12.87□□□□□ -0.35
LINC01053-201ENST00000457628 CLEC11AQ9Y240 323 aa12.85□□□□□ -0.35
LINC01053-201ENST00000457628 CARMIL2Q6F5E8 1435 aa12.83□□□□□ -0.36
LINC01053-201ENST00000457628 SOCS7O14512 581 aa12.83□□□□□ -0.36
LINC01053-201ENST00000457628 TNIKQ9UKE5 1360 aa12.82□□□□□ -0.36
LINC01053-201ENST00000457628 UHRF1BP1LA0JNW5 1464 aa12.82□□□□□ -0.36
LINC01053-201ENST00000457628 STAG3Q9UJ98 1225 aa12.81□□□□□ -0.36
LINC01053-201ENST00000457628 EPRSP07814 1512 aaKnown RBP12.81□□□□□ -0.36
LINC01053-201ENST00000457628 TTBK1Q5TCY1 1321 aaPredicted RBP12.81□□□□□ -0.36
LINC01053-201ENST00000457628 FBXO3Q9UK99 471 aa12.78□□□□□ -0.36
LINC01053-201ENST00000457628 UACAQ9BZF9 1416 aa12.78□□□□□ -0.36
LINC01053-201ENST00000457628 KIF21BO75037 1637 aa12.75□□□□□ -0.37
LINC01053-201ENST00000457628 KDM5BQ9UGL1 1544 aa12.74□□□□□ -0.37
LINC01053-201ENST00000457628 CHRDL2Q6WN34 429 aa12.74□□□□□ -0.37
LINC01053-201ENST00000457628 DISP3Q9P2K9 1392 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms