RNA–Protein interactions for RNA: ENST00000456932.6

CSPG4P10-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 10, humanhuman

BASIC

Gene CSPG4P10, Length 4,817 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P10-201ENST00000456932 CHIC2Q9UKJ5 165 aa15.73■□□□□ 0.11
CSPG4P10-201ENST00000456932 KIF21BO75037 1637 aa15.72■□□□□ 0.11
CSPG4P10-201ENST00000456932 PDS5BQ9NTI5 1447 aa15.69■□□□□ 0.1
CSPG4P10-201ENST00000456932 CHMP7Q8WUX9 453 aaPredicted RBP15.69■□□□□ 0.1
CSPG4P10-201ENST00000456932 HMGXB3Q12766 1538 aa15.69■□□□□ 0.1
CSPG4P10-201ENST00000456932 ZNF326Q5BKZ1 582 aaKnown RBP15.69■□□□□ 0.1
CSPG4P10-201ENST00000456932 FANCD2Q9BXW9 1451 aa15.68■□□□□ 0.1
CSPG4P10-201ENST00000456932 PEG3Q9GZU2 1588 aa15.68■□□□□ 0.1
CSPG4P10-201ENST00000456932 DDX10Q13206 875 aaKnown RBP15.66■□□□□ 0.1
CSPG4P10-201ENST00000456932 CFTRP13569 1480 aa15.65■□□□□ 0.1
CSPG4P10-201ENST00000456932 TDRD9Q8NDG6 1382 aaKnown RBP15.65■□□□□ 0.1
CSPG4P10-201ENST00000456932 TOP2BQ02880 1626 aa15.65■□□□□ 0.1
CSPG4P10-201ENST00000456932 FGD5Q6ZNL6 1462 aa15.63■□□□□ 0.09
CSPG4P10-201ENST00000456932 RRP7BPQ9NSQ0 103 aa15.63■□□□□ 0.09
CSPG4P10-201ENST00000456932 IGF1RP08069 1367 aa15.61■□□□□ 0.09
CSPG4P10-201ENST00000456932 SLC4A1APQ9BWU0 796 aaKnown RBP15.6■□□□□ 0.09
CSPG4P10-201ENST00000456932 ESF1Q9H501 851 aaKnown RBP15.6■□□□□ 0.09
CSPG4P10-201ENST00000456932 ERICH3Q5RHP9 1530 aa15.6■□□□□ 0.09
CSPG4P10-201ENST00000456932 ARHGAP35Q9NRY4 1499 aa15.59■□□□□ 0.09
CSPG4P10-201ENST00000456932 FMN1Q68DA7 1419 aa15.58■□□□□ 0.08
CSPG4P10-201ENST00000456932 FHOD3Q2V2M9 1422 aa15.58■□□□□ 0.08
CSPG4P10-201ENST00000456932 SETD5Q9C0A6 1442 aa15.57■□□□□ 0.08
CSPG4P10-201ENST00000456932 ERCC6Q03468 1493 aa15.57■□□□□ 0.08
CSPG4P10-201ENST00000456932 CUX1P39880 1505 aa15.57■□□□□ 0.08
CSPG4P10-201ENST00000456932 SIN3AQ96ST3 1273 aa15.56■□□□□ 0.08
CSPG4P10-201ENST00000456932 PRXQ9BXM0 1461 aa15.54■□□□□ 0.08
CSPG4P10-201ENST00000456932 HIRIP3Q9BW71 556 aaPredicted RBP15.54■□□□□ 0.08
CSPG4P10-201ENST00000456932 RAB3GAP2Q9H2M9 1393 aa15.54■□□□□ 0.08
CSPG4P10-201ENST00000456932 RAD54L2Q9Y4B4 1467 aa15.51■□□□□ 0.07
CSPG4P10-201ENST00000456932 CC2D2AQ9P2K1 1620 aa15.48■□□□□ 0.07
CSPG4P10-201ENST00000456932 TSPY4P0CV99 314 aa15.48■□□□□ 0.07
CSPG4P10-201ENST00000456932 TSPY10P0CW01 314 aa15.48■□□□□ 0.07
CSPG4P10-201ENST00000456932 ARAP1Q96P48 1450 aa15.48■□□□□ 0.07
CSPG4P10-201ENST00000456932 DHX57Q6P158 1386 aaKnown RBP15.48■□□□□ 0.07
CSPG4P10-201ENST00000456932 PLEKHD1A6NEE1 506 aa15.47■□□□□ 0.07
CSPG4P10-201ENST00000456932 CFDP1Q9UEE9 299 aaPredicted RBP15.46■□□□□ 0.07
CSPG4P10-201ENST00000456932 BCL11AQ9H165 835 aa15.46■□□□□ 0.06
CSPG4P10-201ENST00000456932 GLIPR1L2Q4G1C9 344 aa15.45■□□□□ 0.06
CSPG4P10-201ENST00000456932 TIMELESSQ9UNS1 1208 aa15.45■□□□□ 0.06
CSPG4P10-201ENST00000456932 EIF4G2P78344 907 aaKnown RBP eCLIP15.43■□□□□ 0.06
CSPG4P10-201ENST00000456932 ANP32EQ9BTT0 268 aa15.43■□□□□ 0.06
CSPG4P10-201ENST00000456932 FKBP8Q14318 412 aa15.42■□□□□ 0.06
CSPG4P10-201ENST00000456932 GAPVD1Q14C86 1478 aa15.42■□□□□ 0.06
CSPG4P10-201ENST00000456932 ANP32AP39687 249 aaKnown RBP15.41■□□□□ 0.06
CSPG4P10-201ENST00000456932 NESP48681 1621 aa15.4■□□□□ 0.06
CSPG4P10-201ENST00000456932 HNRNPUQ00839 825 aaKnown RBP eCLIP15.39■□□□□ 0.05
CSPG4P10-201ENST00000456932 BIVM-ERCC5R4GMW8 1640 aa15.39■□□□□ 0.05
CSPG4P10-201ENST00000456932 NBR1Q14596 966 aa15.38■□□□□ 0.05
CSPG4P10-201ENST00000456932 TOPBP1Q92547 1522 aa15.36■□□□□ 0.05
CSPG4P10-201ENST00000456932 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.36■□□□□ 0.05
CSPG4P10-201ENST00000456932 LRRC9Q6ZRR7 1453 aa15.36■□□□□ 0.05
CSPG4P10-201ENST00000456932 POLA1P09884 1462 aaPredicted RBP15.34■□□□□ 0.05
CSPG4P10-201ENST00000456932 RRBP1Q9P2E9 1410 aaKnown RBP15.34■□□□□ 0.05
CSPG4P10-201ENST00000456932 STAG3Q9UJ98 1225 aa15.33■□□□□ 0.05
CSPG4P10-201ENST00000456932 DNMBPQ6XZF7 1577 aa15.33■□□□□ 0.04
CSPG4P10-201ENST00000456932 PHLDB1Q86UU1 1377 aa15.33■□□□□ 0.04
CSPG4P10-201ENST00000456932 NPM2Q86SE8 214 aaKnown RBP15.33■□□□□ 0.04
CSPG4P10-201ENST00000456932 FAM9BQ8IZU0 186 aa15.33■□□□□ 0.04
CSPG4P10-201ENST00000456932 KDM2AQ9Y2K7 1162 aa15.32■□□□□ 0.04
CSPG4P10-201ENST00000456932 CARMIL2Q6F5E8 1435 aa15.32■□□□□ 0.04
CSPG4P10-201ENST00000456932 PLPPR3Q6T4P5 718 aa15.3■□□□□ 0.04
CSPG4P10-201ENST00000456932 CASKIN1Q8WXD9 1431 aa15.3■□□□□ 0.04
CSPG4P10-201ENST00000456932 KCNH8Q96L42 1107 aa15.3■□□□□ 0.04
CSPG4P10-201ENST00000456932 MRS2Q9HD23 443 aa15.29■□□□□ 0.04
CSPG4P10-201ENST00000456932 PPP1R15AO75807 674 aaPredicted RBP15.28■□□□□ 0.04
CSPG4P10-201ENST00000456932 CCDC18Q5T9S5 1454 aa15.28■□□□□ 0.04
CSPG4P10-201ENST00000456932 FYCO1Q9BQS8 1478 aa15.27■□□□□ 0.04
CSPG4P10-201ENST00000456932 EFCAB5A4FU69 1503 aa15.27■□□□□ 0.03
CSPG4P10-201ENST00000456932 FGD6Q6ZV73 1430 aa15.25■□□□□ 0.03
CSPG4P10-201ENST00000456932 TIAM1Q13009 1591 aa15.25■□□□□ 0.03
CSPG4P10-201ENST00000456932 ABCA10Q8WWZ4 1543 aa15.25■□□□□ 0.03
CSPG4P10-201ENST00000456932 AQRO60306 1485 aaKnown RBP eCLIP15.24■□□□□ 0.03
CSPG4P10-201ENST00000456932 MPHOSPH9Q99550 1183 aa15.24■□□□□ 0.03
CSPG4P10-201ENST00000456932 CHGAP10645 457 aaKnown RBP15.23■□□□□ 0.03
CSPG4P10-201ENST00000456932 FOXD1Q16676 465 aa15.22■□□□□ 0.03
CSPG4P10-201ENST00000456932 MYOM3Q5VTT5 1437 aa15.21■□□□□ 0.03
CSPG4P10-201ENST00000456932 TMC1Q8TDI8 760 aa15.2■□□□□ 0.02
CSPG4P10-201ENST00000456932 LAMC3Q9Y6N6 1575 aa15.2■□□□□ 0.02
CSPG4P10-201ENST00000456932 JPH4Q96JJ6 628 aa15.19■□□□□ 0.02
CSPG4P10-201ENST00000456932 HSPA5P11021 654 aaKnown RBP15.19■□□□□ 0.02
CSPG4P10-201ENST00000456932 GRIN2BQ13224 1484 aa15.18■□□□□ 0.02
CSPG4P10-201ENST00000456932 CCER2I3L3R5 266 aa15.18■□□□□ 0.02
CSPG4P10-201ENST00000456932 RGL3Q3MIN7 710 aa15.17■□□□□ 0.02
CSPG4P10-201ENST00000456932 NCOA2Q15596 1464 aa15.17■□□□□ 0.02
CSPG4P10-201ENST00000456932 CARD11Q9BXL7 1154 aa15.17■□□□□ 0.02
CSPG4P10-201ENST00000456932 MRC2Q9UBG0 1479 aa15.16■□□□□ 0.02
CSPG4P10-201ENST00000456932 ZBTB47Q9UFB7 747 aaPredicted RBP15.15■□□□□ 0.02
CSPG4P10-201ENST00000456932 ANKRD30AQ9BXX3 1397 aa15.15■□□□□ 0.02
CSPG4P10-201ENST00000456932 PKD2Q13563 968 aa15.15■□□□□ 0.02
CSPG4P10-201ENST00000456932 CUL7Q14999 1698 aa15.15■□□□□ 0.02
CSPG4P10-201ENST00000456932 PCF11O94913 1555 aaKnown RBP15.14■□□□□ 0.01
CSPG4P10-201ENST00000456932 RTN4Q9NQC3 1192 aaKnown RBP15.12■□□□□ 0.01
CSPG4P10-201ENST00000456932 NEFMP07197 916 aa15.12■□□□□ 0.01
CSPG4P10-201ENST00000456932 L3MBTL2Q969R5 705 aa15.12■□□□□ 0.01
CSPG4P10-201ENST00000456932 MAP3K1Q13233 1512 aa15.12■□□□□ 0.01
CSPG4P10-201ENST00000456932 UACAQ9BZF9 1416 aa15.11■□□□□ 0.01
CSPG4P10-201ENST00000456932 SUPT16HQ9Y5B9 1047 aaKnown RBP15.11■□□□□ 0.01
CSPG4P10-201ENST00000456932 IRX6P78412 446 aaPredicted RBP15.1■□□□□ 0.01
CSPG4P10-201ENST00000456932 DNAJC5BQ9UF47 199 aa15.1■□□□□ 0.01
CSPG4P10-201ENST00000456932 URB2Q14146 1524 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms