RNA–Protein interactions for RNA: ENST00000456458.5

NT5C3A-208, Transcript of 5'-nucleotidase, cytosolic IIIA, humanhuman

TSL 1 (best)

Gene NT5C3A, Length 1,742 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NT5C3A-208ENST00000456458 POLA1P09884 1462 aaPredicted RBP21.53■■□□□ 1.04
NT5C3A-208ENST00000456458 LAMC3Q9Y6N6 1575 aa21.52■■□□□ 1.03
NT5C3A-208ENST00000456458 CFAP43Q8NDM7 1665 aa21.5■■□□□ 1.03
NT5C3A-208ENST00000456458 AQRO60306 1485 aaKnown RBP eCLIP21.47■■□□□ 1.034e-8■■■■■ 31.9
NT5C3A-208ENST00000456458 RAD54L2Q9Y4B4 1467 aa21.47■■□□□ 1.03
NT5C3A-208ENST00000456458 FYCO1Q9BQS8 1478 aa21.45■■□□□ 1.03
NT5C3A-208ENST00000456458 MIER1Q8N108 512 aa21.44■■□□□ 1.02
NT5C3A-208ENST00000456458 PCF11O94913 1555 aaKnown RBP21.43■■□□□ 1.02
NT5C3A-208ENST00000456458 CTTNBP2Q8WZ74 1663 aa21.43■■□□□ 1.02
NT5C3A-208ENST00000456458 GTF3C3Q9Y5Q9 886 aa21.43■■□□□ 1.02
NT5C3A-208ENST00000456458 CASKIN1Q8WXD9 1431 aa21.41■■□□□ 1.02
NT5C3A-208ENST00000456458 WDR97A6NE52 1622 aa21.41■■□□□ 1.02
NT5C3A-208ENST00000456458 NESP48681 1621 aa21.41■■□□□ 1.02
NT5C3A-208ENST00000456458 SETD5Q9C0A6 1442 aa21.4■■□□□ 1.02
NT5C3A-208ENST00000456458 RAB3GAP2Q9H2M9 1393 aa21.39■■□□□ 1.01
NT5C3A-208ENST00000456458 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.39■■□□□ 1.01
NT5C3A-208ENST00000456458 FMN1Q68DA7 1419 aa21.37■■□□□ 1.01
NT5C3A-208ENST00000456458 PHLDB1Q86UU1 1377 aa21.37■■□□□ 1.01
NT5C3A-208ENST00000456458 PDS5BQ9NTI5 1447 aa21.37■■□□□ 1.01
NT5C3A-208ENST00000456458 URB2Q14146 1524 aaKnown RBP21.35■■□□□ 1.01
NT5C3A-208ENST00000456458 FHOD3Q2V2M9 1422 aa21.35■■□□□ 1.01
NT5C3A-208ENST00000456458 ITGAEP38570 1179 aa21.35■■□□□ 1.01
NT5C3A-208ENST00000456458 ABCA5Q8WWZ7 1642 aa21.33■■□□□ 1.01
NT5C3A-208ENST00000456458 P3H3Q8IVL6 736 aa21.3■■□□□ 1
NT5C3A-208ENST00000456458 MAPKBP1O60336 1514 aa21.28■■□□□ 1
NT5C3A-208ENST00000456458 GAPVD1Q14C86 1478 aa21.28■■□□□ 1
NT5C3A-208ENST00000456458 FAM50AQ14320 339 aaKnown RBP21.27■■□□□ 1
NT5C3A-208ENST00000456458 YTHDC1Q96MU7 727 aaKnown RBP21.27■■□□□ 1
NT5C3A-208ENST00000456458 ATP1B4Q9UN42 357 aaPredicted RBP21.26■□□□□ 0.99
NT5C3A-208ENST00000456458 TIMELESSQ9UNS1 1208 aa21.26■□□□□ 0.99
NT5C3A-208ENST00000456458 SAMD9Q5K651 1589 aa21.26■□□□□ 0.99
NT5C3A-208ENST00000456458 SNAPC4Q5SXM2 1469 aa21.24■□□□□ 0.99
NT5C3A-208ENST00000456458 THOC2Q8NI27 1593 aaKnown RBP21.24■□□□□ 0.99
NT5C3A-208ENST00000456458 TDRD9Q8NDG6 1382 aaKnown RBP21.19■□□□□ 0.98
NT5C3A-208ENST00000456458 KIF21AQ7Z4S6 1674 aa21.19■□□□□ 0.98
NT5C3A-208ENST00000456458 FGD6Q6ZV73 1430 aa21.18■□□□□ 0.98
NT5C3A-208ENST00000456458 MTUS2Q5JR59 1369 aa21.17■□□□□ 0.98
NT5C3A-208ENST00000456458 GRIN2BQ13224 1484 aa21.14■□□□□ 0.97
NT5C3A-208ENST00000456458 TARBP1Q13395 1621 aaKnown RBP21.14■□□□□ 0.97
NT5C3A-208ENST00000456458 EHBP1L1Q8N3D4 1523 aa21.11■□□□□ 0.97
NT5C3A-208ENST00000456458 CCDC18Q5T9S5 1454 aa21.1■□□□□ 0.97
NT5C3A-208ENST00000456458 SUPT6HQ7KZ85 1726 aaKnown RBP21.09■□□□□ 0.97
NT5C3A-208ENST00000456458 MYOM3Q5VTT5 1437 aa21.08■□□□□ 0.96
NT5C3A-208ENST00000456458 HFM1A2PYH4 1435 aa21.06■□□□□ 0.96
NT5C3A-208ENST00000456458 NCOA2Q15596 1464 aa21.06■□□□□ 0.96
NT5C3A-208ENST00000456458 PBRM1Q86U86 1689 aa21.05■□□□□ 0.96
NT5C3A-208ENST00000456458 LRRIQ1Q96JM4 1722 aa21.04■□□□□ 0.96
NT5C3A-208ENST00000456458 UACAQ9BZF9 1416 aa21.02■□□□□ 0.96
NT5C3A-208ENST00000456458 SIN3AQ96ST3 1273 aa21.01■□□□□ 0.95
NT5C3A-208ENST00000456458 HECW1Q76N89 1606 aa21.01■□□□□ 0.95
NT5C3A-208ENST00000456458 MRC2Q9UBG0 1479 aa21.01■□□□□ 0.95
NT5C3A-208ENST00000456458 ARHGEF11O15085 1522 aa21■□□□□ 0.95
NT5C3A-208ENST00000456458 UGGT2Q9NYU1 1516 aa21■□□□□ 0.95
NT5C3A-208ENST00000456458 PTPN23Q9H3S7 1636 aa21■□□□□ 0.95
NT5C3A-208ENST00000456458 IQGAP2Q13576 1575 aa21■□□□□ 0.95
NT5C3A-208ENST00000456458 ADAMTS12P58397 1594 aa20.99■□□□□ 0.95
NT5C3A-208ENST00000456458 PPP1R15AO75807 674 aaPredicted RBP20.98■□□□□ 0.95
NT5C3A-208ENST00000456458 TCOF1Q13428 1488 aaKnown RBP20.95■□□□□ 0.94
NT5C3A-208ENST00000456458 NAIPQ13075 1403 aa20.94■□□□□ 0.94
NT5C3A-208ENST00000456458 PTPRKQ15262 1439 aa20.94■□□□□ 0.94
NT5C3A-208ENST00000456458 TONSLQ96HA7 1378 aa20.92■□□□□ 0.94
NT5C3A-208ENST00000456458 IFT140Q96RY7 1462 aa20.92■□□□□ 0.94
NT5C3A-208ENST00000456458 AKNAQ7Z591 1439 aa20.92■□□□□ 0.94
NT5C3A-208ENST00000456458 DNAJC5BQ9UF47 199 aa20.91■□□□□ 0.94
NT5C3A-208ENST00000456458 MIA2Q96PC5 1412 aa20.9■□□□□ 0.94
NT5C3A-208ENST00000456458 EPRSP07814 1512 aaKnown RBP20.9■□□□□ 0.94
NT5C3A-208ENST00000456458 MAGI3Q5TCQ9 1506 aa20.88■□□□□ 0.93
NT5C3A-208ENST00000456458 WDR62O43379 1518 aa20.86■□□□□ 0.93
NT5C3A-208ENST00000456458 GCC2Q8IWJ2 1684 aa20.86■□□□□ 0.93
NT5C3A-208ENST00000456458 DDX10Q13206 875 aaKnown RBP20.83■□□□□ 0.92
NT5C3A-208ENST00000456458 KIAA0586Q9BVV6 1533 aa20.82■□□□□ 0.92
NT5C3A-208ENST00000456458 CCER2I3L3R5 266 aa20.8■□□□□ 0.92
NT5C3A-208ENST00000456458 KIAA0556O60303 1618 aa20.76■□□□□ 0.91
NT5C3A-208ENST00000456458 CDK13Q14004 1512 aaKnown RBP20.76■□□□□ 0.91
NT5C3A-208ENST00000456458 ANP32CO43423 234 aa20.75■□□□□ 0.91
NT5C3A-208ENST00000456458 ROCK1Q13464 1354 aa20.74■□□□□ 0.91
NT5C3A-208ENST00000456458 ZNF608Q9ULD9 1512 aaPredicted RBP20.73■□□□□ 0.91
NT5C3A-208ENST00000456458 CDK11AQ9UQ88 783 aaPredicted RBP20.73■□□□□ 0.91
NT5C3A-208ENST00000456458 SUPT16HQ9Y5B9 1047 aaKnown RBP20.73■□□□□ 0.91
NT5C3A-208ENST00000456458 RRP7BPQ9NSQ0 103 aa20.72■□□□□ 0.91
NT5C3A-208ENST00000456458 DISP1Q96F81 1524 aa20.71■□□□□ 0.91
NT5C3A-208ENST00000456458 GRIN2AQ12879 1464 aa20.71■□□□□ 0.91
NT5C3A-208ENST00000456458 RAPGEF6Q8TEU7 1601 aa20.69■□□□□ 0.9
NT5C3A-208ENST00000456458 KDM5BQ9UGL1 1544 aa20.68■□□□□ 0.9
NT5C3A-208ENST00000456458 TRIM52Q96A61 297 aa20.68■□□□□ 0.9
NT5C3A-208ENST00000456458 MAGI1Q96QZ7 1491 aaPredicted RBP20.68■□□□□ 0.9
NT5C3A-208ENST00000456458 CHIC2Q9UKJ5 165 aa20.67■□□□□ 0.9
NT5C3A-208ENST00000456458 EIF4G3O43432 1585 aaKnown RBP20.67■□□□□ 0.9
NT5C3A-208ENST00000456458 DAPK1P53355 1430 aa20.66■□□□□ 0.9
NT5C3A-208ENST00000456458 KCNH8Q96L42 1107 aa20.66■□□□□ 0.9
NT5C3A-208ENST00000456458 NUP153P49790 1475 aaKnown RBP20.66■□□□□ 0.9
NT5C3A-208ENST00000456458 DNMT1P26358 1616 aaKnown RBP20.65■□□□□ 0.9
NT5C3A-208ENST00000456458 MPHOSPH9Q99550 1183 aa20.64■□□□□ 0.9
NT5C3A-208ENST00000456458 DENND4BO75064 1496 aaPredicted RBP20.62■□□□□ 0.89
NT5C3A-208ENST00000456458 HIRIP3Q9BW71 556 aaPredicted RBP20.62■□□□□ 0.89
NT5C3A-208ENST00000456458 KDM6BO15054 1643 aa20.61■□□□□ 0.89
NT5C3A-208ENST00000456458 ABCC5O15440 1437 aa20.6■□□□□ 0.89
NT5C3A-208ENST00000456458 TROQ12816 1431 aaPredicted RBP20.59■□□□□ 0.89
NT5C3A-208ENST00000456458 SYNJ2O15056 1496 aa20.59■□□□□ 0.89
NT5C3A-208ENST00000456458 MYT1Q01538 1121 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms