RNA–Protein interactions for RNA: ENST00000453578.1

PHBP9-201, Transcript of prohibitin pseudogene 9, humanhuman

BASIC

Gene PHBP9, Length 825 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHBP9-201ENST00000453578 GRIN2BQ13224 1484 aa13.89□□□□□ -0.19
PHBP9-201ENST00000453578 IGF1RP08069 1367 aa13.89□□□□□ -0.19
PHBP9-201ENST00000453578 SNAPC4Q5SXM2 1469 aa13.88□□□□□ -0.19
PHBP9-201ENST00000453578 ERICH3Q5RHP9 1530 aa13.85□□□□□ -0.19
PHBP9-201ENST00000453578 EEA1Q15075 1411 aa13.84□□□□□ -0.19
PHBP9-201ENST00000453578 ADAMTS12P58397 1594 aa13.83□□□□□ -0.2
PHBP9-201ENST00000453578 CARMIL1Q5VZK9 1371 aa13.8□□□□□ -0.2
PHBP9-201ENST00000453578 MAGI1Q96QZ7 1491 aaPredicted RBP13.8□□□□□ -0.2
PHBP9-201ENST00000453578 PRXQ9BXM0 1461 aa13.8□□□□□ -0.2
PHBP9-201ENST00000453578 FHAD1B1AJZ9 1412 aa13.79□□□□□ -0.2
PHBP9-201ENST00000453578 SLC4A2P04920 1241 aa13.77□□□□□ -0.21
PHBP9-201ENST00000453578 CUL7Q14999 1698 aa13.77□□□□□ -0.21
PHBP9-201ENST00000453578 RAPGEF2Q9Y4G8 1499 aa13.76□□□□□ -0.21
PHBP9-201ENST00000453578 SYNJ2O15056 1496 aa13.75□□□□□ -0.21
PHBP9-201ENST00000453578 FBLN2P98095 1184 aa13.73□□□□□ -0.21
PHBP9-201ENST00000453578 GRIN2AQ12879 1464 aa13.73□□□□□ -0.21
PHBP9-201ENST00000453578 CHD1O14646 1710 aa13.73□□□□□ -0.21
PHBP9-201ENST00000453578 KIF21BO75037 1637 aa13.72□□□□□ -0.21
PHBP9-201ENST00000453578 CHMP7Q8WUX9 453 aaPredicted RBP13.72□□□□□ -0.21
PHBP9-201ENST00000453578 LOC105371045A0A1W2PR82 267 aa13.7□□□□□ -0.22
PHBP9-201ENST00000453578 CEP170Q5SW79 1584 aa13.69□□□□□ -0.22
PHBP9-201ENST00000453578 GOLGA3Q08378 1498 aa13.67□□□□□ -0.22
PHBP9-201ENST00000453578 MYCNP04198 464 aaPredicted RBP13.67□□□□□ -0.22
PHBP9-201ENST00000453578 NUP160Q12769 1436 aa13.66□□□□□ -0.22
PHBP9-201ENST00000453578 ATXN8OSP0DMR3 200 aa13.62□□□□□ -0.23
PHBP9-201ENST00000453578 CLASP1Q7Z460 1538 aa13.6□□□□□ -0.23
PHBP9-201ENST00000453578 UBTFP17480 764 aaKnown RBP13.6□□□□□ -0.23
PHBP9-201ENST00000453578 KIAA0586Q9BVV6 1533 aa13.58□□□□□ -0.24
PHBP9-201ENST00000453578 DCAF8L1A6NGE4 600 aa13.57□□□□□ -0.24
PHBP9-201ENST00000453578 OSCARQ8IYS5 282 aa13.57□□□□□ -0.24
PHBP9-201ENST00000453578 CTTNBP2Q8WZ74 1663 aa13.56□□□□□ -0.24
PHBP9-201ENST00000453578 TNIKQ9UKE5 1360 aa13.56□□□□□ -0.24
PHBP9-201ENST00000453578 IQGAP2Q13576 1575 aa13.54□□□□□ -0.24
PHBP9-201ENST00000453578 RANGAP1P46060 587 aaPredicted RBP13.54□□□□□ -0.24
PHBP9-201ENST00000453578 ERCC6L2Q5T890 1561 aa13.51□□□□□ -0.25
PHBP9-201ENST00000453578 SHROOM2Q13796 1616 aa13.5□□□□□ -0.25
PHBP9-201ENST00000453578 JPH4Q96JJ6 628 aa13.5□□□□□ -0.25
PHBP9-201ENST00000453578 UGGT2Q9NYU1 1516 aa13.49□□□□□ -0.25
PHBP9-201ENST00000453578 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.49□□□□□ -0.25
PHBP9-201ENST00000453578 DISP1Q96F81 1524 aa13.48□□□□□ -0.25
PHBP9-201ENST00000453578 CEP162Q5TB80 1403 aa13.47□□□□□ -0.25
PHBP9-201ENST00000453578 PRG4Q92954 1404 aaPredicted RBP13.47□□□□□ -0.25
PHBP9-201ENST00000453578 ARHGAP35Q9NRY4 1499 aa13.47□□□□□ -0.25
PHBP9-201ENST00000453578 P3H3Q8IVL6 736 aa13.46□□□□□ -0.25
PHBP9-201ENST00000453578 SAMD9Q5K651 1589 aa13.45□□□□□ -0.26
PHBP9-201ENST00000453578 CLIP1P30622 1438 aa13.45□□□□□ -0.26
PHBP9-201ENST00000453578 KIAA0556O60303 1618 aa13.44□□□□□ -0.26
PHBP9-201ENST00000453578 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.44□□□□□ -0.26
PHBP9-201ENST00000453578 HNRNPUL2Q1KMD3 747 aaKnown RBP13.44□□□□□ -0.26
PHBP9-201ENST00000453578 FHOD3Q2V2M9 1422 aa13.44□□□□□ -0.26
PHBP9-201ENST00000453578 ARAP1Q96P48 1450 aa13.42□□□□□ -0.26
PHBP9-201ENST00000453578 EFCAB5A4FU69 1503 aa13.4□□□□□ -0.26
PHBP9-201ENST00000453578 ARHGEF11O15085 1522 aa13.4□□□□□ -0.26
PHBP9-201ENST00000453578 TTBK1Q5TCY1 1321 aaPredicted RBP13.39□□□□□ -0.27
PHBP9-201ENST00000453578 RIMBP3CA6NJZ7 1639 aa13.39□□□□□ -0.27
PHBP9-201ENST00000453578 RIMBP3BA6NNM3 1639 aa13.39□□□□□ -0.27
PHBP9-201ENST00000453578 RIMBP3Q9UFD9 1639 aa13.39□□□□□ -0.27
PHBP9-201ENST00000453578 CARMIL2Q6F5E8 1435 aa13.38□□□□□ -0.27
PHBP9-201ENST00000453578 SAMD1Q6SPF0 538 aaPredicted RBP13.36□□□□□ -0.27
PHBP9-201ENST00000453578 PTPRGP23470 1445 aa13.33□□□□□ -0.28
PHBP9-201ENST00000453578 DNAJC5Q9H3Z4 198 aa13.33□□□□□ -0.28
PHBP9-201ENST00000453578 PLB1Q6P1J6 1458 aa13.31□□□□□ -0.28
PHBP9-201ENST00000453578 ABCA8O94911 1581 aa13.28□□□□□ -0.28
PHBP9-201ENST00000453578 PCF11O94913 1555 aaKnown RBP13.28□□□□□ -0.28
PHBP9-201ENST00000453578 VPS8Q8N3P4 1428 aa13.28□□□□□ -0.28
PHBP9-201ENST00000453578 U3KPZ7 1027 aaPredicted RBP13.27□□□□□ -0.29
PHBP9-201ENST00000453578 FMN1Q68DA7 1419 aa13.26□□□□□ -0.29
PHBP9-201ENST00000453578 CYB5RLQ6IPT4 315 aa13.26□□□□□ -0.29
PHBP9-201ENST00000453578 UACAQ9BZF9 1416 aa13.25□□□□□ -0.29
PHBP9-201ENST00000453578 ARID3CA6NKF2 412 aa13.25□□□□□ -0.29
PHBP9-201ENST00000453578 RAPGEF6Q8TEU7 1601 aa13.24□□□□□ -0.29
PHBP9-201ENST00000453578 ADCY10Q96PN6 1610 aa13.24□□□□□ -0.29
PHBP9-201ENST00000453578 NUP153P49790 1475 aaKnown RBP13.23□□□□□ -0.29
PHBP9-201ENST00000453578 CASKIN1Q8WXD9 1431 aa13.23□□□□□ -0.29
PHBP9-201ENST00000453578 ABCC2Q92887 1545 aa13.23□□□□□ -0.29
PHBP9-201ENST00000453578 APLP2Q06481 763 aa13.21□□□□□ -0.29
PHBP9-201ENST00000453578 ATP1B4Q9UN42 357 aaPredicted RBP13.21□□□□□ -0.29
PHBP9-201ENST00000453578 CDK13Q14004 1512 aaKnown RBP13.21□□□□□ -0.29
PHBP9-201ENST00000453578 LRRIQ1Q96JM4 1722 aa13.21□□□□□ -0.3
PHBP9-201ENST00000453578 UHRF1BP1LA0JNW5 1464 aa13.21□□□□□ -0.3
PHBP9-201ENST00000453578 FYCO1Q9BQS8 1478 aa13.21□□□□□ -0.3
PHBP9-201ENST00000453578 HECW1Q76N89 1606 aa13.19□□□□□ -0.3
PHBP9-201ENST00000453578 ATP10BO94823 1461 aa13.18□□□□□ -0.3
PHBP9-201ENST00000453578 EPRSP07814 1512 aaKnown RBP13.18□□□□□ -0.3
PHBP9-201ENST00000453578 KDM5BQ9UGL1 1544 aa13.15□□□□□ -0.3
PHBP9-201ENST00000453578 ZCCHC11Q5TAX3 1644 aaKnown RBP13.15□□□□□ -0.3
PHBP9-201ENST00000453578 MAGI3Q5TCQ9 1506 aa13.13□□□□□ -0.31
PHBP9-201ENST00000453578 ATF5Q9Y2D1 282 aaPredicted RBP13.12□□□□□ -0.31
PHBP9-201ENST00000453578 CFAP43Q8NDM7 1665 aa13.12□□□□□ -0.31
PHBP9-201ENST00000453578 TIAM1Q13009 1591 aa13.11□□□□□ -0.31
PHBP9-201ENST00000453578 CCDC18Q5T9S5 1454 aa13.11□□□□□ -0.31
PHBP9-201ENST00000453578 KANK4Q5T7N3 995 aaPredicted RBP13.11□□□□□ -0.31
PHBP9-201ENST00000453578 PPARGC1BQ86YN6 1023 aaKnown RBP13.11□□□□□ -0.31
PHBP9-201ENST00000453578 ASXL2Q76L83 1435 aa13.08□□□□□ -0.32
PHBP9-201ENST00000453578 MAP3K1Q13233 1512 aa13.07□□□□□ -0.32
PHBP9-201ENST00000453578 LRRC9Q6ZRR7 1453 aa13.06□□□□□ -0.32
PHBP9-201ENST00000453578 NPM1P06748 294 aaKnown RBP eCLIP13.05□□□□□ -0.32
PHBP9-201ENST00000453578 TROQ12816 1431 aaPredicted RBP13.05□□□□□ -0.32
PHBP9-201ENST00000453578 WDR7Q9Y4E6 1490 aa13.04□□□□□ -0.32
PHBP9-201ENST00000453578 MAPKBP1O60336 1514 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 257.6 ms