RNA–Protein interactions for RNA: ENST00000452622.1

HRAT92-201, humanhuman

TSL 2 BASIC

Gene HRAT92, Length 3,506 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HRAT92-201ENST00000452622 ANP32CO43423 234 aa24.51■■□□□ 1.51
HRAT92-201ENST00000452622 RBM19Q9Y4C8 960 aaKnown RBP24.51■■□□□ 1.51
HRAT92-201ENST00000452622 WDR97A6NE52 1622 aa24.5■■□□□ 1.51
HRAT92-201ENST00000452622 ATP1B4Q9UN42 357 aaPredicted RBP24.5■■□□□ 1.51
HRAT92-201ENST00000452622 CUX1P39880 1505 aa24.5■■□□□ 1.51
HRAT92-201ENST00000452622 PPP1R15AO75807 674 aaPredicted RBP24.49■■□□□ 1.51
HRAT92-201ENST00000452622 BCL11AQ9H165 835 aa24.48■■□□□ 1.51
HRAT92-201ENST00000452622 PHLDB1Q86UU1 1377 aa24.42■■□□□ 1.5
HRAT92-201ENST00000452622 CCER2I3L3R5 266 aa24.41■■□□□ 1.5
HRAT92-201ENST00000452622 P3H3Q8IVL6 736 aa24.39■■□□□ 1.49
HRAT92-201ENST00000452622 TIAM1Q13009 1591 aa24.38■■□□□ 1.49
HRAT92-201ENST00000452622 TIMELESSQ9UNS1 1208 aa24.38■■□□□ 1.49
HRAT92-201ENST00000452622 LRRC9Q6ZRR7 1453 aa24.36■■□□□ 1.49
HRAT92-201ENST00000452622 IGF1RP08069 1367 aa24.32■■□□□ 1.48
HRAT92-201ENST00000452622 MAP3K1Q13233 1512 aa24.29■■□□□ 1.48
HRAT92-201ENST00000452622 CARMIL1Q5VZK9 1371 aa24.28■■□□□ 1.48
HRAT92-201ENST00000452622 TONSLQ96HA7 1378 aa24.28■■□□□ 1.48
HRAT92-201ENST00000452622 IRX6P78412 446 aaPredicted RBP24.23■■□□□ 1.47
HRAT92-201ENST00000452622 HNRNPUQ00839 825 aaKnown RBP eCLIP24.23■■□□□ 1.47
HRAT92-201ENST00000452622 FHAD1B1AJZ9 1412 aa24.23■■□□□ 1.47
HRAT92-201ENST00000452622 CFTRP13569 1480 aa24.22■■□□□ 1.47
HRAT92-201ENST00000452622 NCAPD3P42695 1498 aa24.21■■□□□ 1.47
HRAT92-201ENST00000452622 ERICH6Q7L0X2 663 aa24.18■■□□□ 1.46
HRAT92-201ENST00000452622 CDK11AQ9UQ88 783 aaPredicted RBP24.18■■□□□ 1.46
HRAT92-201ENST00000452622 MSH5O43196 834 aa24.18■■□□□ 1.46
HRAT92-201ENST00000452622 HMGXB3Q12766 1538 aa24.15■■□□□ 1.46
HRAT92-201ENST00000452622 FHOD3Q2V2M9 1422 aa24.1■■□□□ 1.45
HRAT92-201ENST00000452622 PCF11O94913 1555 aaKnown RBP24.1■■□□□ 1.45
HRAT92-201ENST00000452622 FANCIQ9NVI1 1328 aa24.04■■□□□ 1.44
HRAT92-201ENST00000452622 CCDC18Q5T9S5 1454 aa24.04■■□□□ 1.44
HRAT92-201ENST00000452622 FGD5Q6ZNL6 1462 aa24.03■■□□□ 1.44
HRAT92-201ENST00000452622 CFAP43Q8NDM7 1665 aa24.02■■□□□ 1.44
HRAT92-201ENST00000452622 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.01■■□□□ 1.43
HRAT92-201ENST00000452622 FGD6Q6ZV73 1430 aa23.99■■□□□ 1.43
HRAT92-201ENST00000452622 MTUS2Q5JR59 1369 aa23.98■■□□□ 1.43
HRAT92-201ENST00000452622 UACAQ9BZF9 1416 aa23.98■■□□□ 1.43
HRAT92-201ENST00000452622 FYCO1Q9BQS8 1478 aa23.96■■□□□ 1.43
HRAT92-201ENST00000452622 CASKIN1Q8WXD9 1431 aa23.95■■□□□ 1.42
HRAT92-201ENST00000452622 HSPA5P11021 654 aaKnown RBP23.95■■□□□ 1.42
HRAT92-201ENST00000452622 PPP4R2Q9NY27 417 aa23.93■■□□□ 1.42
HRAT92-201ENST00000452622 WASHC2AQ641Q2 1341 aa23.93■■□□□ 1.42
HRAT92-201ENST00000452622 CADPSQ9ULU8 1353 aa23.92■■□□□ 1.42
HRAT92-201ENST00000452622 HFM1A2PYH4 1435 aa23.92■■□□□ 1.42
HRAT92-201ENST00000452622 PTPRKQ15262 1439 aa23.92■■□□□ 1.42
HRAT92-201ENST00000452622 FAM9BQ8IZU0 186 aa23.91■■□□□ 1.42
HRAT92-201ENST00000452622 EIF4G2P78344 907 aaKnown RBP eCLIP23.88■■□□□ 1.41
HRAT92-201ENST00000452622 CCDC184Q52MB2 194 aa23.88■■□□□ 1.41
HRAT92-201ENST00000452622 ERICH6BQ5W0A0 696 aa23.87■■□□□ 1.41
HRAT92-201ENST00000452622 B4GALNT3Q6L9W6 998 aa23.87■■□□□ 1.41
HRAT92-201ENST00000452622 RRP7BPQ9NSQ0 103 aa23.87■■□□□ 1.41
HRAT92-201ENST00000452622 CHIC2Q9UKJ5 165 aa23.86■■□□□ 1.41
HRAT92-201ENST00000452622 NAIPQ13075 1403 aa23.85■■□□□ 1.41
HRAT92-201ENST00000452622 FMN1Q68DA7 1419 aa23.84■■□□□ 1.41
HRAT92-201ENST00000452622 PTPN23Q9H3S7 1636 aa23.84■■□□□ 1.41
HRAT92-201ENST00000452622 AQRO60306 1485 aaKnown RBP eCLIP23.83■■□□□ 1.41
HRAT92-201ENST00000452622 MRS2Q9HD23 443 aa23.83■■□□□ 1.41
HRAT92-201ENST00000452622 EFCAB5A4FU69 1503 aa23.82■■□□□ 1.4
HRAT92-201ENST00000452622 RAD54L2Q9Y4B4 1467 aa23.8■■□□□ 1.4
HRAT92-201ENST00000452622 PRKRIP1Q9H875 184 aaPredicted RBP23.76■■□□□ 1.39
HRAT92-201ENST00000452622 MYOM3Q5VTT5 1437 aa23.76■■□□□ 1.39
HRAT92-201ENST00000452622 PRDM2Q13029 1718 aa23.76■■□□□ 1.39
HRAT92-201ENST00000452622 NCOA2Q15596 1464 aa23.76■■□□□ 1.39
HRAT92-201ENST00000452622 CNTLNQ9NXG0 1405 aa23.75■■□□□ 1.39
HRAT92-201ENST00000452622 KDM5BQ9UGL1 1544 aa23.75■■□□□ 1.39
HRAT92-201ENST00000452622 C11orf95C9JLR9 678 aaPredicted RBP23.72■■□□□ 1.39
HRAT92-201ENST00000452622 L3MBTL2Q969R5 705 aa23.72■■□□□ 1.39
HRAT92-201ENST00000452622 MYT1LQ9UL68 1186 aa23.72■■□□□ 1.39
HRAT92-201ENST00000452622 CNGB1Q14028 1251 aaPredicted RBP23.71■■□□□ 1.39
HRAT92-201ENST00000452622 ZBED9Q6R2W3 1325 aa23.71■■□□□ 1.39
HRAT92-201ENST00000452622 SNAPC4Q5SXM2 1469 aa23.71■■□□□ 1.39
HRAT92-201ENST00000452622 FOXD1Q16676 465 aa23.7■■□□□ 1.38
HRAT92-201ENST00000452622 FANCD2Q9BXW9 1451 aa23.7■■□□□ 1.38
HRAT92-201ENST00000452622 DEKP35659 375 aaKnown RBP23.7■■□□□ 1.38
HRAT92-201ENST00000452622 CCDC7Q96M83 1385 aa23.67■■□□□ 1.38
HRAT92-201ENST00000452622 NBR1Q14596 966 aa23.67■■□□□ 1.38
HRAT92-201ENST00000452622 MPHOSPH9Q99550 1183 aa23.67■■□□□ 1.38
HRAT92-201ENST00000452622 ABCA10Q8WWZ4 1543 aa23.65■■□□□ 1.38
HRAT92-201ENST00000452622 NOP58Q9Y2X3 529 aaKnown RBP23.65■■□□□ 1.38
HRAT92-201ENST00000452622 POLA1P09884 1462 aaPredicted RBP23.63■■□□□ 1.37
HRAT92-201ENST00000452622 NCOA1Q15788 1441 aa23.6■■□□□ 1.37
HRAT92-201ENST00000452622 POLR3GLQ9BT43 218 aa23.59■■□□□ 1.37
HRAT92-201ENST00000452622 CTTNBP2Q8WZ74 1663 aa23.58■■□□□ 1.36
HRAT92-201ENST00000452622 SUPT6HQ7KZ85 1726 aaKnown RBP23.57■■□□□ 1.36
HRAT92-201ENST00000452622 ARID3CA6NKF2 412 aa23.57■■□□□ 1.36
HRAT92-201ENST00000452622 PAK3O75914 559 aaPredicted RBP23.56■■□□□ 1.36
HRAT92-201ENST00000452622 NBPF8Q3BBV2 869 aa23.56■■□□□ 1.36
HRAT92-201ENST00000452622 CCDC136Q96JN2 1154 aa23.56■■□□□ 1.36
HRAT92-201ENST00000452622 CC2D2AQ9P2K1 1620 aa23.56■■□□□ 1.36
HRAT92-201ENST00000452622 DENND4BO75064 1496 aaPredicted RBP23.56■■□□□ 1.36
HRAT92-201ENST00000452622 TOPBP1Q92547 1522 aa23.56■■□□□ 1.36
HRAT92-201ENST00000452622 KIF7Q2M1P5 1343 aa23.56■■□□□ 1.36
HRAT92-201ENST00000452622 CUL7Q14999 1698 aa23.56■■□□□ 1.36
HRAT92-201ENST00000452622 EHBP1L1Q8N3D4 1523 aa23.55■■□□□ 1.36
HRAT92-201ENST00000452622 DNMBPQ6XZF7 1577 aa23.55■■□□□ 1.36
HRAT92-201ENST00000452622 SENP3-EIF4A1A0A087X0R7 540 aa23.55■■□□□ 1.36
HRAT92-201ENST00000452622 GRIN2BQ13224 1484 aa23.55■■□□□ 1.36
HRAT92-201ENST00000452622 TDRD9Q8NDG6 1382 aaKnown RBP23.54■■□□□ 1.36
HRAT92-201ENST00000452622 ANP32AP39687 249 aaKnown RBP23.52■■□□□ 1.36
HRAT92-201ENST00000452622 AKNAQ7Z591 1439 aa23.51■■□□□ 1.35
HRAT92-201ENST00000452622 UGGT2Q9NYU1 1516 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms