RNA–Protein interactions for RNA: ENST00000451871.1

KARSP1-201, Transcript of lysyl-tRNA synthetase pseudogene 1, humanhuman

BASIC

Gene KARSP1, Length 1,752 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP1-201ENST00000451871 FBXO3Q9UK99 471 aa11.87□□□□□ -0.51
KARSP1-201ENST00000451871 ARAP1Q96P48 1450 aa11.8□□□□□ -0.52
KARSP1-201ENST00000451871 CEP164Q9UPV0 1460 aa11.79□□□□□ -0.52
KARSP1-201ENST00000451871 MROH2BQ7Z745 1585 aa11.78□□□□□ -0.52
KARSP1-201ENST00000451871 VASPP50552 380 aaPredicted RBP11.77□□□□□ -0.53
KARSP1-201ENST00000451871 FANCD2Q9BXW9 1451 aa11.75□□□□□ -0.53
KARSP1-201ENST00000451871 ZNF692Q9BU19 519 aaPredicted RBP11.7□□□□□ -0.54
KARSP1-201ENST00000451871 CACNB1Q02641 598 aaPredicted RBP11.69□□□□□ -0.54
KARSP1-201ENST00000451871 IFNLR1Q8IU57 520 aaPredicted RBP11.69□□□□□ -0.54
KARSP1-201ENST00000451871 URB2Q14146 1524 aaKnown RBP11.68□□□□□ -0.54
KARSP1-201ENST00000451871 CHD1O14646 1710 aa11.66□□□□□ -0.54
KARSP1-201ENST00000451871 SPDYE2BA6NHP3 402 aa11.65□□□□□ -0.54
KARSP1-201ENST00000451871 SPDYE6P0CI01 402 aa11.65□□□□□ -0.54
KARSP1-201ENST00000451871 SPDYE2Q495Y8 402 aa11.65□□□□□ -0.54
KARSP1-201ENST00000451871 SSUH2Q9Y2M2 353 aa11.65□□□□□ -0.54
KARSP1-201ENST00000451871 CFTRP13569 1480 aa11.64□□□□□ -0.55
KARSP1-201ENST00000451871 WIZO95785 1651 aa11.62□□□□□ -0.55
KARSP1-201ENST00000451871 ZNF608Q9ULD9 1512 aaPredicted RBP11.62□□□□□ -0.55
KARSP1-201ENST00000451871 RSF1Q96T23 1441 aaPredicted RBP11.6□□□□□ -0.55
KARSP1-201ENST00000451871 IFT140Q96RY7 1462 aa11.57□□□□□ -0.56
KARSP1-201ENST00000451871 PLCB2Q00722 1185 aa11.57□□□□□ -0.56
KARSP1-201ENST00000451871 ERCC6L2Q5T890 1561 aa11.51□□□□□ -0.57
KARSP1-201ENST00000451871 EIF4G3O43432 1585 aaKnown RBP11.51□□□□□ -0.57
KARSP1-201ENST00000451871 PRDM2Q13029 1718 aa11.49□□□□□ -0.57
KARSP1-201ENST00000451871 STAG3Q9UJ98 1225 aa11.49□□□□□ -0.57
KARSP1-201ENST00000451871 LMTK3Q96Q04 1460 aa11.47□□□□□ -0.57
KARSP1-201ENST00000451871 TOPBP1Q92547 1522 aa11.46□□□□□ -0.57
KARSP1-201ENST00000451871 PKD2Q13563 968 aa11.46□□□□□ -0.57
KARSP1-201ENST00000451871 AQRO60306 1485 aaKnown RBP eCLIP11.46□□□□□ -0.57
KARSP1-201ENST00000451871 KDM4FA0A1W2PPD8 638 aa11.46□□□□□ -0.58
KARSP1-201ENST00000451871 KIF13AQ9H1H9 1805 aa11.46□□□□□ -0.58
KARSP1-201ENST00000451871 HAP1P54257 671 aaPredicted RBP11.44□□□□□ -0.58
KARSP1-201ENST00000451871 KLHL34Q8N239 644 aa11.43□□□□□ -0.58
KARSP1-201ENST00000451871 FBXO41Q8TF61 875 aa11.42□□□□□ -0.58
KARSP1-201ENST00000451871 HECW2Q9P2P5 1572 aa11.41□□□□□ -0.58
KARSP1-201ENST00000451871 PLCD3Q8N3E9 789 aa11.41□□□□□ -0.58
KARSP1-201ENST00000451871 TOP2AP11388 1531 aaKnown RBP11.41□□□□□ -0.58
KARSP1-201ENST00000451871 ABCC8Q09428 1581 aa11.41□□□□□ -0.58
KARSP1-201ENST00000451871 TARBP1Q13395 1621 aaKnown RBP11.4□□□□□ -0.58
KARSP1-201ENST00000451871 CLASP1Q7Z460 1538 aa11.4□□□□□ -0.58
KARSP1-201ENST00000451871 MIER1Q8N108 512 aa11.39□□□□□ -0.59
KARSP1-201ENST00000451871 SPOCK2Q92563 424 aa11.39□□□□□ -0.59
KARSP1-201ENST00000451871 PRKCSHP14314 528 aaPredicted RBP11.38□□□□□ -0.59
KARSP1-201ENST00000451871 SOCS7O14512 581 aa11.37□□□□□ -0.59
KARSP1-201ENST00000451871 DNMBPQ6XZF7 1577 aa11.37□□□□□ -0.59
KARSP1-201ENST00000451871 CHMP7Q8WUX9 453 aaPredicted RBP11.33□□□□□ -0.59
KARSP1-201ENST00000451871 SYNJ1O43426 1573 aa11.33□□□□□ -0.6
KARSP1-201ENST00000451871 POLA1P09884 1462 aaPredicted RBP11.32□□□□□ -0.6
KARSP1-201ENST00000451871 GAPVD1Q14C86 1478 aa11.32□□□□□ -0.6
KARSP1-201ENST00000451871 TDRD9Q8NDG6 1382 aaKnown RBP11.32□□□□□ -0.6
KARSP1-201ENST00000451871 CCDC88BA6NC98 1476 aa11.31□□□□□ -0.6
KARSP1-201ENST00000451871 SNAPC4Q5SXM2 1469 aa11.31□□□□□ -0.6
KARSP1-201ENST00000451871 RAD54L2Q9Y4B4 1467 aa11.29□□□□□ -0.6
KARSP1-201ENST00000451871 KDM6BO15054 1643 aa11.29□□□□□ -0.6
KARSP1-201ENST00000451871 BCANQ96GW7 911 aa11.28□□□□□ -0.6
KARSP1-201ENST00000451871 SOGA1O94964 1423 aa11.27□□□□□ -0.6
KARSP1-201ENST00000451871 ECM2O94769 699 aaPredicted RBP11.26□□□□□ -0.61
KARSP1-201ENST00000451871 ILDR2Q71H61 639 aa11.26□□□□□ -0.61
KARSP1-201ENST00000451871 MAGI1Q96QZ7 1491 aaPredicted RBP11.26□□□□□ -0.61
KARSP1-201ENST00000451871 RBM42Q9BTD8 480 aaKnown RBP11.25□□□□□ -0.61
KARSP1-201ENST00000451871 AKT1S1Q96B36 256 aa11.24□□□□□ -0.61
KARSP1-201ENST00000451871 WDR97A6NE52 1622 aa11.23□□□□□ -0.61
KARSP1-201ENST00000451871 SYNJ2O15056 1496 aa11.23□□□□□ -0.61
KARSP1-201ENST00000451871 TAOK2Q9UL54 1235 aa11.23□□□□□ -0.61
KARSP1-201ENST00000451871 ADGRL1O94910 1474 aa11.23□□□□□ -0.61
KARSP1-201ENST00000451871 PLEKHG5O94827 1062 aa11.22□□□□□ -0.61
KARSP1-201ENST00000451871 GRIN2BQ13224 1484 aa11.21□□□□□ -0.61
KARSP1-201ENST00000451871 ZBTB47Q9UFB7 747 aaPredicted RBP11.21□□□□□ -0.62
KARSP1-201ENST00000451871 SPDYE1Q8NFV5 336 aaPredicted RBP11.2□□□□□ -0.62
KARSP1-201ENST00000451871 VSIG10Q8N0Z9 540 aa11.19□□□□□ -0.62
KARSP1-201ENST00000451871 TSPOAP1O95153 1857 aa11.19□□□□□ -0.62
KARSP1-201ENST00000451871 RGL2O15211 777 aa11.18□□□□□ -0.62
KARSP1-201ENST00000451871 DISP3Q9P2K9 1392 aa11.18□□□□□ -0.62
KARSP1-201ENST00000451871 REM2Q8IYK8 340 aaPredicted RBP11.18□□□□□ -0.62
KARSP1-201ENST00000451871 FGD5Q6ZNL6 1462 aa11.17□□□□□ -0.62
KARSP1-201ENST00000451871 CIZ1Q9ULV3 898 aaPredicted RBP11.17□□□□□ -0.62
KARSP1-201ENST00000451871 CLEC11AQ9Y240 323 aa11.17□□□□□ -0.62
KARSP1-201ENST00000451871 NPM1P06748 294 aaKnown RBP eCLIP11.14□□□□□ -0.63
KARSP1-201ENST00000451871 KDM2AQ9Y2K7 1162 aa11.14□□□□□ -0.63
KARSP1-201ENST00000451871 PBRM1Q86U86 1689 aa11.14□□□□□ -0.63
KARSP1-201ENST00000451871 DIP2BQ9P265 1576 aa11.12□□□□□ -0.63
KARSP1-201ENST00000451871 PRR29P0C7W0 189 aa11.11□□□□□ -0.63
KARSP1-201ENST00000451871 CREBZFQ9NS37 354 aa11.11□□□□□ -0.63
KARSP1-201ENST00000451871 CEP170Q5SW79 1584 aa11.11□□□□□ -0.63
KARSP1-201ENST00000451871 FAM69CQ0P6D2 419 aa11.11□□□□□ -0.63
KARSP1-201ENST00000451871 ABCC10Q5T3U5 1492 aa11.1□□□□□ -0.63
KARSP1-201ENST00000451871 CUX1P39880 1505 aa11.09□□□□□ -0.63
KARSP1-201ENST00000451871 NUBP1P53384 320 aa11.09□□□□□ -0.63
KARSP1-201ENST00000451871 SPATA31D1Q6ZQQ2 1576 aa11.09□□□□□ -0.63
KARSP1-201ENST00000451871 MNX1P50219 401 aaPredicted RBP11.08□□□□□ -0.64
KARSP1-201ENST00000451871 TPRNQ4KMQ1 711 aa11.08□□□□□ -0.64
KARSP1-201ENST00000451871 GRIN2AQ12879 1464 aa11.06□□□□□ -0.64
KARSP1-201ENST00000451871 SHROOM2Q13796 1616 aa11.06□□□□□ -0.64
KARSP1-201ENST00000451871 PITPNM1O00562 1244 aa11.05□□□□□ -0.64
KARSP1-201ENST00000451871 PAXIP1Q6ZW49 1069 aaPredicted RBP11.05□□□□□ -0.64
KARSP1-201ENST00000451871 NUP160Q12769 1436 aa11.05□□□□□ -0.64
KARSP1-201ENST00000451871 BBXQ8WY36 941 aaPredicted RBP11.05□□□□□ -0.64
KARSP1-201ENST00000451871 CFAP44Q96MT7 982 aa11.04□□□□□ -0.64
KARSP1-201ENST00000451871 ABCA5Q8WWZ7 1642 aa11.04□□□□□ -0.64
KARSP1-201ENST00000451871 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 294.3 ms