RNA–Protein interactions for RNA: ENST00000451348.1

LINC01839-201, Transcript of long intergenic non-protein coding RNA 1839, humanhuman

TSL 3 BASIC

Gene LINC01839, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01839-201ENST00000451348 NPM1P06748 294 aaKnown RBP eCLIP13.08□□□□□ -0.32
LINC01839-201ENST00000451348 COL17A1Q9UMD9 1497 aaPredicted RBP13.05□□□□□ -0.32
LINC01839-201ENST00000451348 NUP160Q12769 1436 aa13.05□□□□□ -0.32
LINC01839-201ENST00000451348 TOP2AP11388 1531 aaKnown RBP13.02□□□□□ -0.33
LINC01839-201ENST00000451348 PCF11O94913 1555 aaKnown RBP13.01□□□□□ -0.33
LINC01839-201ENST00000451348 PPRC1Q5VV67 1664 aaKnown RBP13.01□□□□□ -0.33
LINC01839-201ENST00000451348 GRIN2AQ12879 1464 aa13□□□□□ -0.33
LINC01839-201ENST00000451348 ADCY10Q96PN6 1610 aa12.99□□□□□ -0.33
LINC01839-201ENST00000451348 PRG4Q92954 1404 aaPredicted RBP12.96□□□□□ -0.34
LINC01839-201ENST00000451348 PBRM1Q86U86 1689 aa12.96□□□□□ -0.34
LINC01839-201ENST00000451348 FGD5Q6ZNL6 1462 aa12.94□□□□□ -0.34
LINC01839-201ENST00000451348 GLI2P10070 1586 aa12.94□□□□□ -0.34
LINC01839-201ENST00000451348 PTPRMP28827 1452 aa12.93□□□□□ -0.34
LINC01839-201ENST00000451348 CCDC88BA6NC98 1476 aa12.85□□□□□ -0.35
LINC01839-201ENST00000451348 TEX14Q8IWB6 1497 aa12.85□□□□□ -0.35
LINC01839-201ENST00000451348 ABCA5Q8WWZ7 1642 aa12.84□□□□□ -0.35
LINC01839-201ENST00000451348 JPH4Q96JJ6 628 aa12.83□□□□□ -0.36
LINC01839-201ENST00000451348 ADAMTSL3P82987 1691 aa12.83□□□□□ -0.36
LINC01839-201ENST00000451348 ADAMTS12P58397 1594 aa12.82□□□□□ -0.36
LINC01839-201ENST00000451348 PLB1Q6P1J6 1458 aa12.81□□□□□ -0.36
LINC01839-201ENST00000451348 MAP3K4Q9Y6R4 1608 aa12.79□□□□□ -0.36
LINC01839-201ENST00000451348 KIF21BO75037 1637 aa12.78□□□□□ -0.36
LINC01839-201ENST00000451348 HSPA2P54652 639 aa12.78□□□□□ -0.36
LINC01839-201ENST00000451348 ASXL2Q76L83 1435 aa12.78□□□□□ -0.36
LINC01839-201ENST00000451348 ABCA10Q8WWZ4 1543 aa12.77□□□□□ -0.37
LINC01839-201ENST00000451348 FHAD1B1AJZ9 1412 aa12.75□□□□□ -0.37
LINC01839-201ENST00000451348 KIAA0586Q9BVV6 1533 aa12.75□□□□□ -0.37
LINC01839-201ENST00000451348 CUX1P39880 1505 aa12.73□□□□□ -0.37
LINC01839-201ENST00000451348 ABCC2Q92887 1545 aa12.72□□□□□ -0.37
LINC01839-201ENST00000451348 IQSEC2Q5JU85 1478 aa12.72□□□□□ -0.37
LINC01839-201ENST00000451348 SUPT5HO00267 1087 aaKnown RBP12.71□□□□□ -0.37
LINC01839-201ENST00000451348 EPRSP07814 1512 aaKnown RBP12.71□□□□□ -0.38
LINC01839-201ENST00000451348 RUSC2Q8N2Y8 1516 aa12.68□□□□□ -0.38
LINC01839-201ENST00000451348 MED1Q15648 1581 aaPredicted RBP12.68□□□□□ -0.38
LINC01839-201ENST00000451348 MADDQ8WXG6 1647 aa12.66□□□□□ -0.38
LINC01839-201ENST00000451348 BCORL1Q5H9F3 1711 aa12.63□□□□□ -0.39
LINC01839-201ENST00000451348 DMRT2Q9Y5R5 561 aa12.63□□□□□ -0.39
LINC01839-201ENST00000451348 YEATS2Q9ULM3 1422 aa12.62□□□□□ -0.39
LINC01839-201ENST00000451348 MAGI3Q5TCQ9 1506 aa12.6□□□□□ -0.39
LINC01839-201ENST00000451348 LTBP4Q8N2S1 1624 aa12.59□□□□□ -0.39
LINC01839-201ENST00000451348 PTPRGP23470 1445 aa12.59□□□□□ -0.39
LINC01839-201ENST00000451348 UHRF1BP1LA0JNW5 1464 aa12.59□□□□□ -0.39
LINC01839-201ENST00000451348 ERICH3Q5RHP9 1530 aa12.57□□□□□ -0.4
LINC01839-201ENST00000451348 CUL7Q14999 1698 aa12.57□□□□□ -0.4
LINC01839-201ENST00000451348 RIMS1Q86UR5 1692 aaKnown RBP12.54□□□□□ -0.4
LINC01839-201ENST00000451348 ARAP3Q8WWN8 1544 aa12.54□□□□□ -0.4
LINC01839-201ENST00000451348 PTPRTO14522 1441 aa12.54□□□□□ -0.4
LINC01839-201ENST00000451348 STRCQ7RTU9 1775 aa12.53□□□□□ -0.4
LINC01839-201ENST00000451348 KDM5BQ9UGL1 1544 aa12.53□□□□□ -0.4
LINC01839-201ENST00000451348 PHF23Q9BUL5 403 aaPredicted RBP12.5□□□□□ -0.41
LINC01839-201ENST00000451348 CD109Q6YHK3 1445 aa12.5□□□□□ -0.41
LINC01839-201ENST00000451348 TNIKQ9UKE5 1360 aa12.47□□□□□ -0.41
LINC01839-201ENST00000451348 CFAP43Q8NDM7 1665 aa12.47□□□□□ -0.41
LINC01839-201ENST00000451348 WDR7Q9Y4E6 1490 aa12.46□□□□□ -0.41
LINC01839-201ENST00000451348 UACAQ9BZF9 1416 aa12.46□□□□□ -0.41
LINC01839-201ENST00000451348 UBAP1LF5GYI3 381 aa12.46□□□□□ -0.41
LINC01839-201ENST00000451348 ARID4BQ4LE39 1312 aaPredicted RBP12.45□□□□□ -0.42
LINC01839-201ENST00000451348 WRNQ14191 1432 aaPredicted RBP eCLIP12.45□□□□□ -0.42
LINC01839-201ENST00000451348 PREX1Q8TCU6 1659 aa12.43□□□□□ -0.42
LINC01839-201ENST00000451348 ZCCHC11Q5TAX3 1644 aaKnown RBP12.42□□□□□ -0.42
LINC01839-201ENST00000451348 HSPA1LP34931 641 aa12.42□□□□□ -0.42
LINC01839-201ENST00000451348 TTC37Q6PGP7 1564 aa12.4□□□□□ -0.42
LINC01839-201ENST00000451348 PHLDB1Q86UU1 1377 aa12.4□□□□□ -0.42
LINC01839-201ENST00000451348 CARMIL2Q6F5E8 1435 aa12.38□□□□□ -0.43
LINC01839-201ENST00000451348 PLPPR3Q6T4P5 718 aa12.37□□□□□ -0.43
LINC01839-201ENST00000451348 TTBK1Q5TCY1 1321 aaPredicted RBP12.37□□□□□ -0.43
LINC01839-201ENST00000451348 POGZQ7Z3K3 1410 aa12.36□□□□□ -0.43
LINC01839-201ENST00000451348 SRCAPQ6ZRS2 3230 aa12.35□□□□□ -0.43
LINC01839-201ENST00000451348 ARHGEF40Q8TER5 1519 aa12.35□□□□□ -0.43
LINC01839-201ENST00000451348 RGS17Q9UGC6 210 aaPredicted RBP12.34□□□□□ -0.43
LINC01839-201ENST00000451348 RAPGEF3O95398 923 aa12.33□□□□□ -0.44
LINC01839-201ENST00000451348 FRMPD1Q5SYB0 1578 aa12.32□□□□□ -0.44
LINC01839-201ENST00000451348 UHRF1BP1Q6BDS2 1440 aa12.32□□□□□ -0.44
LINC01839-201ENST00000451348 FANCAO15360 1455 aa12.32□□□□□ -0.44
LINC01839-201ENST00000451348 FER1L4A9Z1Z3 1794 aa12.28□□□□□ -0.44
LINC01839-201ENST00000451348 NCOA1Q15788 1441 aa12.27□□□□□ -0.45
LINC01839-201ENST00000451348 NEO1Q92859 1461 aa12.26□□□□□ -0.45
LINC01839-201ENST00000451348 ZNF335Q9H4Z2 1342 aaPredicted RBP12.25□□□□□ -0.45
LINC01839-201ENST00000451348 KCNH8Q96L42 1107 aa12.24□□□□□ -0.45
LINC01839-201ENST00000451348 ARHGEF12Q9NZN5 1544 aa12.23□□□□□ -0.45
LINC01839-201ENST00000451348 SIGLEC1Q9BZZ2 1709 aa12.23□□□□□ -0.45
LINC01839-201ENST00000451348 DISP1Q96F81 1524 aa12.22□□□□□ -0.45
LINC01839-201ENST00000451348 AKNAQ7Z591 1439 aa12.22□□□□□ -0.45
LINC01839-201ENST00000451348 SCAF1Q9H7N4 1312 aaKnown RBP12.22□□□□□ -0.45
LINC01839-201ENST00000451348 SETD1BQ9UPS6 1966 aaKnown RBP12.22□□□□□ -0.45
LINC01839-201ENST00000451348 TOM1O60784 492 aa12.21□□□□□ -0.45
LINC01839-201ENST00000451348 PIP4K2BP78356 416 aa12.21□□□□□ -0.45
LINC01839-201ENST00000451348 BIVM-ERCC5R4GMW8 1640 aa12.19□□□□□ -0.46
LINC01839-201ENST00000451348 CEBPAP49715 358 aaPredicted RBP12.19□□□□□ -0.46
LINC01839-201ENST00000451348 POTEAQ6S8J7 498 aa12.19□□□□□ -0.46
LINC01839-201ENST00000451348 KIAA0556O60303 1618 aa12.16□□□□□ -0.46
LINC01839-201ENST00000451348 ABCA9Q8IUA7 1624 aa12.16□□□□□ -0.46
LINC01839-201ENST00000451348 FHOD3Q2V2M9 1422 aa12.16□□□□□ -0.46
LINC01839-201ENST00000451348 IQGAP2Q13576 1575 aa12.16□□□□□ -0.46
LINC01839-201ENST00000451348 MLECQ14165 292 aa12.15□□□□□ -0.46
LINC01839-201ENST00000451348 UPF1Q92900 1129 aaKnown RBP eCLIP12.15□□□□□ -0.46
LINC01839-201ENST00000451348 ZMYM4Q5VZL5 1548 aa12.15□□□□□ -0.46
LINC01839-201ENST00000451348 SETD1AO15047 1707 aaKnown RBP12.14□□□□□ -0.47
LINC01839-201ENST00000451348 IFFO2Q5TF58 517 aa12.14□□□□□ -0.47
LINC01839-201ENST00000451348 KIF27Q86VH2 1401 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms