RNA–Protein interactions for RNA: ENST00000450650.5

CAPN13-202, Transcript of calpain 13, humanhuman

TSL 2

Gene CAPN13, Length 2,328 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-202ENST00000450650 FANCD2Q9BXW9 1451 aa14.27□□□□□ -0.12
CAPN13-202ENST00000450650 UBTFP17480 764 aaKnown RBP14.24□□□□□ -0.13
CAPN13-202ENST00000450650 CEP162Q5TB80 1403 aa14.22□□□□□ -0.13
CAPN13-202ENST00000450650 PDS5BQ9NTI5 1447 aa14.22□□□□□ -0.13
CAPN13-202ENST00000450650 C14orf37Q86TY3 774 aa14.22□□□□□ -0.13
CAPN13-202ENST00000450650 KIF27Q86VH2 1401 aa14.21□□□□□ -0.13
CAPN13-202ENST00000450650 TRIM26Q12899 539 aaPredicted RBP14.21□□□□□ -0.13
CAPN13-202ENST00000450650 PPP4R3CPQ6ZMV5 832 aa14.19□□□□□ -0.14
CAPN13-202ENST00000450650 FGD5Q6ZNL6 1462 aa14.18□□□□□ -0.14
CAPN13-202ENST00000450650 NPM2Q86SE8 214 aaKnown RBP14.18□□□□□ -0.14
CAPN13-202ENST00000450650 DNMBPQ6XZF7 1577 aa14.17□□□□□ -0.14
CAPN13-202ENST00000450650 RAPGEF2Q9Y4G8 1499 aa14.17□□□□□ -0.14
CAPN13-202ENST00000450650 PRXQ9BXM0 1461 aa14.15□□□□□ -0.14
CAPN13-202ENST00000450650 EIF5BO60841 1220 aaKnown RBP14.15□□□□□ -0.14
CAPN13-202ENST00000450650 ERICH3Q5RHP9 1530 aa14.15□□□□□ -0.14
CAPN13-202ENST00000450650 TOPBP1Q92547 1522 aa14.14□□□□□ -0.15
CAPN13-202ENST00000450650 CUX2O14529 1486 aa14.13□□□□□ -0.15
CAPN13-202ENST00000450650 KIF21AQ7Z4S6 1674 aa14.12□□□□□ -0.15
CAPN13-202ENST00000450650 POLA1P09884 1462 aaPredicted RBP14.09□□□□□ -0.15
CAPN13-202ENST00000450650 URB2Q14146 1524 aaKnown RBP14.08□□□□□ -0.16
CAPN13-202ENST00000450650 ACIN1Q9UKV3 1341 aaKnown RBP14.07□□□□□ -0.16
CAPN13-202ENST00000450650 CLIP1P30622 1438 aa14.07□□□□□ -0.16
CAPN13-202ENST00000450650 SENP3Q9H4L4 574 aaPredicted RBP14.07□□□□□ -0.16
CAPN13-202ENST00000450650 IGF1RP08069 1367 aa14.06□□□□□ -0.16
CAPN13-202ENST00000450650 ABCA10Q8WWZ4 1543 aa14.06□□□□□ -0.16
CAPN13-202ENST00000450650 RAD54L2Q9Y4B4 1467 aa14.05□□□□□ -0.16
CAPN13-202ENST00000450650 ERCC6Q03468 1493 aa14.04□□□□□ -0.16
CAPN13-202ENST00000450650 MRC2Q9UBG0 1479 aa14.03□□□□□ -0.16
CAPN13-202ENST00000450650 ANP32EQ9BTT0 268 aa14.02□□□□□ -0.17
CAPN13-202ENST00000450650 FOXD4L1Q9NU39 408 aa14□□□□□ -0.17
CAPN13-202ENST00000450650 CARMIL1Q5VZK9 1371 aa14□□□□□ -0.17
CAPN13-202ENST00000450650 WDR97A6NE52 1622 aa13.99□□□□□ -0.17
CAPN13-202ENST00000450650 VPS8Q8N3P4 1428 aa13.97□□□□□ -0.17
CAPN13-202ENST00000450650 WDR62O43379 1518 aa13.94□□□□□ -0.18
CAPN13-202ENST00000450650 CUL7Q14999 1698 aa13.93□□□□□ -0.18
CAPN13-202ENST00000450650 ABCA5Q8WWZ7 1642 aa13.93□□□□□ -0.18
CAPN13-202ENST00000450650 NEUROD1Q13562 356 aa13.91□□□□□ -0.18
CAPN13-202ENST00000450650 ZEB1P37275 1124 aaPredicted RBP13.91□□□□□ -0.18
CAPN13-202ENST00000450650 TARBP1Q13395 1621 aaKnown RBP13.91□□□□□ -0.18
CAPN13-202ENST00000450650 ARAP1Q96P48 1450 aa13.9□□□□□ -0.18
CAPN13-202ENST00000450650 THOC2Q8NI27 1593 aaKnown RBP13.9□□□□□ -0.18
CAPN13-202ENST00000450650 GAPVD1Q14C86 1478 aa13.89□□□□□ -0.19
CAPN13-202ENST00000450650 TDRD9Q8NDG6 1382 aaKnown RBP13.89□□□□□ -0.19
CAPN13-202ENST00000450650 ARHGAP35Q9NRY4 1499 aa13.87□□□□□ -0.19
CAPN13-202ENST00000450650 UBE2Q2Q8WVN8 375 aa13.86□□□□□ -0.19
CAPN13-202ENST00000450650 IFT140Q96RY7 1462 aa13.85□□□□□ -0.19
CAPN13-202ENST00000450650 PLEKHG5O94827 1062 aa13.84□□□□□ -0.19
CAPN13-202ENST00000450650 PBRM1Q86U86 1689 aa13.8□□□□□ -0.2
CAPN13-202ENST00000450650 CTTNBP2Q8WZ74 1663 aa13.8□□□□□ -0.2
CAPN13-202ENST00000450650 AQRO60306 1485 aaKnown RBP eCLIP13.78□□□□□ -0.2
CAPN13-202ENST00000450650 FBXO3Q9UK99 471 aa13.77□□□□□ -0.21
CAPN13-202ENST00000450650 EFCAB5A4FU69 1503 aa13.76□□□□□ -0.21
CAPN13-202ENST00000450650 ZNF608Q9ULD9 1512 aaPredicted RBP13.76□□□□□ -0.21
CAPN13-202ENST00000450650 GRIN2BQ13224 1484 aa13.76□□□□□ -0.21
CAPN13-202ENST00000450650 FHAD1B1AJZ9 1412 aa13.74□□□□□ -0.21
CAPN13-202ENST00000450650 ANO8Q9HCE9 1232 aaPredicted RBP13.74□□□□□ -0.21
CAPN13-202ENST00000450650 PAXIP1Q6ZW49 1069 aaPredicted RBP13.74□□□□□ -0.21
CAPN13-202ENST00000450650 CFAP44Q96MT7 982 aa13.74□□□□□ -0.21
CAPN13-202ENST00000450650 ADAMTS12P58397 1594 aa13.74□□□□□ -0.21
CAPN13-202ENST00000450650 EIF4G3O43432 1585 aaKnown RBP13.7□□□□□ -0.22
CAPN13-202ENST00000450650 FHOD3Q2V2M9 1422 aa13.69□□□□□ -0.22
CAPN13-202ENST00000450650 KANK4Q5T7N3 995 aaPredicted RBP13.68□□□□□ -0.22
CAPN13-202ENST00000450650 P3H3Q8IVL6 736 aa13.68□□□□□ -0.22
CAPN13-202ENST00000450650 MAP3K1Q13233 1512 aa13.68□□□□□ -0.22
CAPN13-202ENST00000450650 TSHZ2Q9NRE2 1034 aa13.68□□□□□ -0.22
CAPN13-202ENST00000450650 SAMD9Q5K651 1589 aa13.67□□□□□ -0.22
CAPN13-202ENST00000450650 PCF11O94913 1555 aaKnown RBP13.66□□□□□ -0.22
CAPN13-202ENST00000450650 TIAM1Q13009 1591 aa13.66□□□□□ -0.22
CAPN13-202ENST00000450650 SNAPC4Q5SXM2 1469 aa13.65□□□□□ -0.22
CAPN13-202ENST00000450650 FMN1Q68DA7 1419 aa13.65□□□□□ -0.23
CAPN13-202ENST00000450650 FYCO1Q9BQS8 1478 aa13.64□□□□□ -0.23
CAPN13-202ENST00000450650 NBR1Q14596 966 aa13.63□□□□□ -0.23
CAPN13-202ENST00000450650 CASKIN1Q8WXD9 1431 aa13.63□□□□□ -0.23
CAPN13-202ENST00000450650 IQGAP2Q13576 1575 aa13.62□□□□□ -0.23
CAPN13-202ENST00000450650 MAGI1Q96QZ7 1491 aaPredicted RBP13.62□□□□□ -0.23
CAPN13-202ENST00000450650 CFAP43Q8NDM7 1665 aa13.62□□□□□ -0.23
CAPN13-202ENST00000450650 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.61□□□□□ -0.23
CAPN13-202ENST00000450650 CCER1Q8TC90 406 aaPredicted RBP13.61□□□□□ -0.23
CAPN13-202ENST00000450650 LRRC9Q6ZRR7 1453 aa13.6□□□□□ -0.23
CAPN13-202ENST00000450650 GRIN2AQ12879 1464 aa13.6□□□□□ -0.23
CAPN13-202ENST00000450650 RRBP1Q9P2E9 1410 aaKnown RBP13.59□□□□□ -0.23
CAPN13-202ENST00000450650 HNRNPUL2Q1KMD3 747 aaKnown RBP13.58□□□□□ -0.23
CAPN13-202ENST00000450650 CHMP7Q8WUX9 453 aaPredicted RBP13.58□□□□□ -0.23
CAPN13-202ENST00000450650 ATP1B4Q9UN42 357 aaPredicted RBP13.58□□□□□ -0.24
CAPN13-202ENST00000450650 SYNJ2O15056 1496 aa13.57□□□□□ -0.24
CAPN13-202ENST00000450650 KIAA0586Q9BVV6 1533 aa13.56□□□□□ -0.24
CAPN13-202ENST00000450650 UGGT2Q9NYU1 1516 aa13.56□□□□□ -0.24
CAPN13-202ENST00000450650 NPM1P06748 294 aaKnown RBP eCLIP13.56□□□□□ -0.24
CAPN13-202ENST00000450650 CCNB3Q8WWL7 1395 aa13.54□□□□□ -0.24
CAPN13-202ENST00000450650 PKD2Q13563 968 aa13.52□□□□□ -0.24
CAPN13-202ENST00000450650 PKNOX2Q96KN3 472 aa13.52□□□□□ -0.24
CAPN13-202ENST00000450650 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.51□□□□□ -0.25
CAPN13-202ENST00000450650 CEP170Q5SW79 1584 aa13.5□□□□□ -0.25
CAPN13-202ENST00000450650 PHLDB1Q86UU1 1377 aa13.49□□□□□ -0.25
CAPN13-202ENST00000450650 LRRIQ1Q96JM4 1722 aa13.49□□□□□ -0.25
CAPN13-202ENST00000450650 KIAA0556O60303 1618 aa13.48□□□□□ -0.25
CAPN13-202ENST00000450650 DISP1Q96F81 1524 aa13.48□□□□□ -0.25
CAPN13-202ENST00000450650 NUP160Q12769 1436 aa13.48□□□□□ -0.25
CAPN13-202ENST00000450650 HECW1Q76N89 1606 aa13.48□□□□□ -0.25
CAPN13-202ENST00000450650 CCDC18Q5T9S5 1454 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms