RNA–Protein interactions for RNA: ENST00000450185.5

SFXN5-206, Transcript of sideroflexin 5, humanhuman

TSL 2

Gene SFXN5, Length 2,975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-206ENST00000450185 VPS8Q8N3P4 1428 aa18.05■□□□□ 0.48
SFXN5-206ENST00000450185 KIF21AQ7Z4S6 1674 aa18.04■□□□□ 0.48
SFXN5-206ENST00000450185 CARMIL1Q5VZK9 1371 aa18.03■□□□□ 0.48
SFXN5-206ENST00000450185 APLP2Q06481 763 aa17.97■□□□□ 0.47
SFXN5-206ENST00000450185 WDR97A6NE52 1622 aa17.95■□□□□ 0.46
SFXN5-206ENST00000450185 ARAP1Q96P48 1450 aa17.94■□□□□ 0.46
SFXN5-206ENST00000450185 CENPBP07199 599 aaPredicted RBP17.94■□□□□ 0.46
SFXN5-206ENST00000450185 CUL7Q14999 1698 aa17.9■□□□□ 0.46
SFXN5-206ENST00000450185 YTHDC1Q96MU7 727 aaKnown RBP17.89■□□□□ 0.45
SFXN5-206ENST00000450185 MRC2Q9UBG0 1479 aa17.89■□□□□ 0.45
SFXN5-206ENST00000450185 ARHGAP35Q9NRY4 1499 aa17.89■□□□□ 0.45
SFXN5-206ENST00000450185 TDRD9Q8NDG6 1382 aaKnown RBP17.88■□□□□ 0.45
SFXN5-206ENST00000450185 ABCA5Q8WWZ7 1642 aa17.88■□□□□ 0.45
SFXN5-206ENST00000450185 ZNF316A6NFI3 1004 aaPredicted RBP17.88■□□□□ 0.45
SFXN5-206ENST00000450185 GAPVD1Q14C86 1478 aa17.86■□□□□ 0.45
SFXN5-206ENST00000450185 TARBP1Q13395 1621 aaKnown RBP17.85■□□□□ 0.45
SFXN5-206ENST00000450185 SLC4A1APQ9BWU0 796 aaKnown RBP17.85■□□□□ 0.45
SFXN5-206ENST00000450185 WDR62O43379 1518 aa17.77■□□□□ 0.44
SFXN5-206ENST00000450185 ERCC6Q03468 1493 aa17.75■□□□□ 0.43
SFXN5-206ENST00000450185 CTTNBP2Q8WZ74 1663 aa17.74■□□□□ 0.43
SFXN5-206ENST00000450185 IFT140Q96RY7 1462 aa17.72■□□□□ 0.43
SFXN5-206ENST00000450185 AQRO60306 1485 aaKnown RBP eCLIP17.71■□□□□ 0.432e-7■■■■□ 22.1
SFXN5-206ENST00000450185 PBRM1Q86U86 1689 aa17.7■□□□□ 0.42
SFXN5-206ENST00000450185 EFCAB5A4FU69 1503 aa17.7■□□□□ 0.42
SFXN5-206ENST00000450185 MIER1Q8N108 512 aa17.7■□□□□ 0.42
SFXN5-206ENST00000450185 KANK4Q5T7N3 995 aaPredicted RBP17.7■□□□□ 0.42
SFXN5-206ENST00000450185 MYT1Q01538 1121 aa17.69■□□□□ 0.42
SFXN5-206ENST00000450185 FHAD1B1AJZ9 1412 aa17.68■□□□□ 0.42
SFXN5-206ENST00000450185 P3H3Q8IVL6 736 aa17.67■□□□□ 0.42
SFXN5-206ENST00000450185 NPM3O75607 178 aaKnown RBP17.67■□□□□ 0.42
SFXN5-206ENST00000450185 GRIN2BQ13224 1484 aa17.66■□□□□ 0.42
SFXN5-206ENST00000450185 FHOD3Q2V2M9 1422 aa17.65■□□□□ 0.42
SFXN5-206ENST00000450185 THOC2Q8NI27 1593 aaKnown RBP17.65■□□□□ 0.42
SFXN5-206ENST00000450185 ZNF608Q9ULD9 1512 aaPredicted RBP17.65■□□□□ 0.42
SFXN5-206ENST00000450185 MAP3K1Q13233 1512 aa17.63■□□□□ 0.41
SFXN5-206ENST00000450185 ADAMTS12P58397 1594 aa17.63■□□□□ 0.41
SFXN5-206ENST00000450185 ITGAEP38570 1179 aa17.62■□□□□ 0.41
SFXN5-206ENST00000450185 TIAM1Q13009 1591 aa17.61■□□□□ 0.41
SFXN5-206ENST00000450185 PCF11O94913 1555 aaKnown RBP17.6■□□□□ 0.41
SFXN5-206ENST00000450185 SAMD9Q5K651 1589 aa17.58■□□□□ 0.4
SFXN5-206ENST00000450185 FYCO1Q9BQS8 1478 aa17.57■□□□□ 0.4
SFXN5-206ENST00000450185 FMN1Q68DA7 1419 aa17.57■□□□□ 0.4
SFXN5-206ENST00000450185 EIF4G3O43432 1585 aaKnown RBP17.57■□□□□ 0.4
SFXN5-206ENST00000450185 NCBP3Q53F19 620 aaKnown RBP17.56■□□□□ 0.4
SFXN5-206ENST00000450185 CASKIN1Q8WXD9 1431 aa17.56■□□□□ 0.4
SFXN5-206ENST00000450185 RRBP1Q9P2E9 1410 aaKnown RBP17.55■□□□□ 0.4
SFXN5-206ENST00000450185 ATP1B4Q9UN42 357 aaPredicted RBP17.55■□□□□ 0.4
SFXN5-206ENST00000450185 LRRC9Q6ZRR7 1453 aa17.55■□□□□ 0.4
SFXN5-206ENST00000450185 CFAP43Q8NDM7 1665 aa17.54■□□□□ 0.4
SFXN5-206ENST00000450185 SNAPC4Q5SXM2 1469 aa17.53■□□□□ 0.4
SFXN5-206ENST00000450185 IQGAP2Q13576 1575 aa17.52■□□□□ 0.4
SFXN5-206ENST00000450185 CCNB3Q8WWL7 1395 aa17.49■□□□□ 0.39
SFXN5-206ENST00000450185 MAGI1Q96QZ7 1491 aaPredicted RBP17.47■□□□□ 0.39
SFXN5-206ENST00000450185 GRIN2AQ12879 1464 aa17.46■□□□□ 0.39
SFXN5-206ENST00000450185 DHX57Q6P158 1386 aaKnown RBP17.45■□□□□ 0.38
SFXN5-206ENST00000450185 KIAA0586Q9BVV6 1533 aa17.43■□□□□ 0.38
SFXN5-206ENST00000450185 MAPK8IP2Q13387 824 aaPredicted RBP17.43■□□□□ 0.38
SFXN5-206ENST00000450185 PHLDB1Q86UU1 1377 aa17.42■□□□□ 0.38
SFXN5-206ENST00000450185 UGGT2Q9NYU1 1516 aa17.42■□□□□ 0.38
SFXN5-206ENST00000450185 SYNJ2O15056 1496 aa17.41■□□□□ 0.38
SFXN5-206ENST00000450185 CHMP7Q8WUX9 453 aaPredicted RBP17.4■□□□□ 0.38
SFXN5-206ENST00000450185 ZBTB22O15209 634 aa17.38■□□□□ 0.37
SFXN5-206ENST00000450185 LRRIQ1Q96JM4 1722 aa17.37■□□□□ 0.37
SFXN5-206ENST00000450185 MTUS2Q5JR59 1369 aa17.37■□□□□ 0.37
SFXN5-206ENST00000450185 CLSPNQ9HAW4 1339 aa17.36■□□□□ 0.37
SFXN5-206ENST00000450185 FBLN2P98095 1184 aa17.35■□□□□ 0.37
SFXN5-206ENST00000450185 CEP170Q5SW79 1584 aa17.34■□□□□ 0.37
SFXN5-206ENST00000450185 DISP1Q96F81 1524 aa17.34■□□□□ 0.37
SFXN5-206ENST00000450185 HECW1Q76N89 1606 aa17.33■□□□□ 0.37
SFXN5-206ENST00000450185 CCDC18Q5T9S5 1454 aa17.33■□□□□ 0.37
SFXN5-206ENST00000450185 FAM50AQ14320 339 aaKnown RBP17.33■□□□□ 0.37
SFXN5-206ENST00000450185 KIAA0556O60303 1618 aa17.33■□□□□ 0.36
SFXN5-206ENST00000450185 NUP160Q12769 1436 aa17.3■□□□□ 0.36
SFXN5-206ENST00000450185 EHBP1L1Q8N3D4 1523 aa17.3■□□□□ 0.36
SFXN5-206ENST00000450185 EPRSP07814 1512 aaKnown RBP17.28■□□□□ 0.36
SFXN5-206ENST00000450185 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.27■□□□□ 0.36
SFXN5-206ENST00000450185 SUPT6HQ7KZ85 1726 aaKnown RBP17.26■□□□□ 0.35
SFXN5-206ENST00000450185 NCOA2Q15596 1464 aa17.26■□□□□ 0.35
SFXN5-206ENST00000450185 FGD6Q6ZV73 1430 aa17.26■□□□□ 0.35
SFXN5-206ENST00000450185 MAGI3Q5TCQ9 1506 aa17.25■□□□□ 0.35
SFXN5-206ENST00000450185 SUPT16HQ9Y5B9 1047 aaKnown RBP17.25■□□□□ 0.35
SFXN5-206ENST00000450185 CNKSR2Q8WXI2 1034 aa17.24■□□□□ 0.35
SFXN5-206ENST00000450185 RAB3GAP2Q9H2M9 1393 aa17.24■□□□□ 0.35
SFXN5-206ENST00000450185 CDK13Q14004 1512 aaKnown RBP17.23■□□□□ 0.35
SFXN5-206ENST00000450185 JPH4Q96JJ6 628 aa17.23■□□□□ 0.35
SFXN5-206ENST00000450185 SIN3AQ96ST3 1273 aa17.22■□□□□ 0.35
SFXN5-206ENST00000450185 MYOM3Q5VTT5 1437 aa17.22■□□□□ 0.35
SFXN5-206ENST00000450185 CARMIL2Q6F5E8 1435 aa17.21■□□□□ 0.35
SFXN5-206ENST00000450185 ARHGEF11O15085 1522 aa17.21■□□□□ 0.34
SFXN5-206ENST00000450185 RAPGEF6Q8TEU7 1601 aa17.2■□□□□ 0.34
SFXN5-206ENST00000450185 SETD5Q9C0A6 1442 aa17.2■□□□□ 0.34
SFXN5-206ENST00000450185 ARID3CA6NKF2 412 aa17.2■□□□□ 0.34
SFXN5-206ENST00000450185 NUP153P49790 1475 aaKnown RBP17.19■□□□□ 0.34
SFXN5-206ENST00000450185 KCNH8Q96L42 1107 aa17.17■□□□□ 0.34
SFXN5-206ENST00000450185 HIRIP3Q9BW71 556 aaPredicted RBP17.16■□□□□ 0.34
SFXN5-206ENST00000450185 DDX10Q13206 875 aaKnown RBP17.14■□□□□ 0.33
SFXN5-206ENST00000450185 PLB1Q6P1J6 1458 aa17.14■□□□□ 0.33
SFXN5-206ENST00000450185 PTPN23Q9H3S7 1636 aa17.13■□□□□ 0.33
SFXN5-206ENST00000450185 TSHZ2Q9NRE2 1034 aa17.12■□□□□ 0.33
SFXN5-206ENST00000450185 CHD1O14646 1710 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms