RNA–Protein interactions for RNA: ENST00000448926.5

LMBR1-212, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 3,629 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-212ENST00000448926 DNMBPQ6XZF7 1577 aa6.24□□□□□ -1.41
LMBR1-212ENST00000448926 DIEXFQ68CQ4 756 aaKnown RBP6.23□□□□□ -1.41
LMBR1-212ENST00000448926 NEUROD1Q13562 356 aa6.21□□□□□ -1.41
LMBR1-212ENST00000448926 ZNF608Q9ULD9 1512 aaPredicted RBP6.21□□□□□ -1.41
LMBR1-212ENST00000448926 PHLDB1Q86UU1 1377 aa6.21□□□□□ -1.41
LMBR1-212ENST00000448926 PDS5BQ9NTI5 1447 aa6.21□□□□□ -1.42
LMBR1-212ENST00000448926 GAPVD1Q14C86 1478 aa6.21□□□□□ -1.42
LMBR1-212ENST00000448926 ABCA10Q8WWZ4 1543 aa6.2□□□□□ -1.42
LMBR1-212ENST00000448926 HIRIP3Q9BW71 556 aaPredicted RBP6.2□□□□□ -1.42
LMBR1-212ENST00000448926 PCF11O94913 1555 aaKnown RBP6.2□□□□□ -1.42
LMBR1-212ENST00000448926 SIN3AQ96ST3 1273 aa6.19□□□□□ -1.42
LMBR1-212ENST00000448926 CHIC2Q9UKJ5 165 aa6.19□□□□□ -1.42
LMBR1-212ENST00000448926 CCNB3Q8WWL7 1395 aa6.19□□□□□ -1.42
LMBR1-212ENST00000448926 LAMC3Q9Y6N6 1575 aa6.19□□□□□ -1.42
LMBR1-212ENST00000448926 ERCC6Q03468 1493 aa6.18□□□□□ -1.42
LMBR1-212ENST00000448926 DHX57Q6P158 1386 aaKnown RBP6.17□□□□□ -1.42
LMBR1-212ENST00000448926 ZNF316A6NFI3 1004 aaPredicted RBP6.17□□□□□ -1.42
LMBR1-212ENST00000448926 MIER1Q8N108 512 aa6.17□□□□□ -1.42
LMBR1-212ENST00000448926 TIAM1Q13009 1591 aa6.16□□□□□ -1.42
LMBR1-212ENST00000448926 RAB3GAP2Q9H2M9 1393 aa6.16□□□□□ -1.42
LMBR1-212ENST00000448926 LRRC9Q6ZRR7 1453 aa6.16□□□□□ -1.42
LMBR1-212ENST00000448926 SCAF1Q9H7N4 1312 aaKnown RBP6.15□□□□□ -1.42
LMBR1-212ENST00000448926 RRP7BPQ9NSQ0 103 aa6.15□□□□□ -1.42
LMBR1-212ENST00000448926 MTUS2Q5JR59 1369 aa6.15□□□□□ -1.43
LMBR1-212ENST00000448926 WDR97A6NE52 1622 aa6.14□□□□□ -1.43
LMBR1-212ENST00000448926 ABCA5Q8WWZ7 1642 aa6.14□□□□□ -1.43
LMBR1-212ENST00000448926 TARBP1Q13395 1621 aaKnown RBP6.13□□□□□ -1.43
LMBR1-212ENST00000448926 RRBP1Q9P2E9 1410 aaKnown RBP6.13□□□□□ -1.43
LMBR1-212ENST00000448926 FOXD1Q16676 465 aa6.13□□□□□ -1.43
LMBR1-212ENST00000448926 MRC2Q9UBG0 1479 aa6.13□□□□□ -1.43
LMBR1-212ENST00000448926 CTTNBP2Q8WZ74 1663 aa6.13□□□□□ -1.43
LMBR1-212ENST00000448926 CHMP7Q8WUX9 453 aaPredicted RBP6.13□□□□□ -1.43
LMBR1-212ENST00000448926 CDK13Q14004 1512 aaKnown RBP6.13□□□□□ -1.43
LMBR1-212ENST00000448926 LRRIQ1Q96JM4 1722 aa6.12□□□□□ -1.43
LMBR1-212ENST00000448926 FHAD1B1AJZ9 1412 aa6.12□□□□□ -1.43
LMBR1-212ENST00000448926 ZNF777Q9ULD5 760 aaPredicted RBP6.12□□□□□ -1.43
LMBR1-212ENST00000448926 ZNF644Q9H582 1327 aaPredicted RBP6.12□□□□□ -1.43
LMBR1-212ENST00000448926 SNAPC4Q5SXM2 1469 aa6.11□□□□□ -1.43
LMBR1-212ENST00000448926 CUL7Q14999 1698 aa6.11□□□□□ -1.43
LMBR1-212ENST00000448926 PBRM1Q86U86 1689 aa6.11□□□□□ -1.43
LMBR1-212ENST00000448926 PTPRKQ15262 1439 aa6.11□□□□□ -1.43
LMBR1-212ENST00000448926 MAGI3Q5TCQ9 1506 aa6.1□□□□□ -1.43
LMBR1-212ENST00000448926 CASKIN1Q8WXD9 1431 aa6.1□□□□□ -1.43
LMBR1-212ENST00000448926 KCNH8Q96L42 1107 aa6.1□□□□□ -1.43
LMBR1-212ENST00000448926 TRIM52Q96A61 297 aa6.09□□□□□ -1.43
LMBR1-212ENST00000448926 SETD5Q9C0A6 1442 aa6.09□□□□□ -1.44
LMBR1-212ENST00000448926 CNGB1Q14028 1251 aaPredicted RBP6.08□□□□□ -1.44
LMBR1-212ENST00000448926 FYCO1Q9BQS8 1478 aa6.08□□□□□ -1.44
LMBR1-212ENST00000448926 FMN1Q68DA7 1419 aa6.08□□□□□ -1.44
LMBR1-212ENST00000448926 NCOA2Q15596 1464 aa6.08□□□□□ -1.44
LMBR1-212ENST00000448926 CFAP43Q8NDM7 1665 aa6.08□□□□□ -1.44
LMBR1-212ENST00000448926 GRIN2BQ13224 1484 aa6.07□□□□□ -1.44
LMBR1-212ENST00000448926 EIF4G3O43432 1585 aaKnown RBP6.07□□□□□ -1.44
LMBR1-212ENST00000448926 GTF3C3Q9Y5Q9 886 aa6.07□□□□□ -1.44
LMBR1-212ENST00000448926 FGD6Q6ZV73 1430 aa6.07□□□□□ -1.44
LMBR1-212ENST00000448926 ADAMTS12P58397 1594 aa6.07□□□□□ -1.44
LMBR1-212ENST00000448926 MAPKBP1O60336 1514 aa6.07□□□□□ -1.44
LMBR1-212ENST00000448926 IQGAP2Q13576 1575 aa6.06□□□□□ -1.44
LMBR1-212ENST00000448926 THOC2Q8NI27 1593 aaKnown RBP6.06□□□□□ -1.44
LMBR1-212ENST00000448926 ACIN1Q9UKV3 1341 aaKnown RBP6.06□□□□□ -1.44
LMBR1-212ENST00000448926 EFCAB5A4FU69 1503 aa6.06□□□□□ -1.44
LMBR1-212ENST00000448926 DDX10Q13206 875 aaKnown RBP6.06□□□□□ -1.44
LMBR1-212ENST00000448926 PLB1Q6P1J6 1458 aa6.06□□□□□ -1.44
LMBR1-212ENST00000448926 SAMD9Q5K651 1589 aa6.06□□□□□ -1.44
LMBR1-212ENST00000448926 IFT140Q96RY7 1462 aa6.05□□□□□ -1.44
LMBR1-212ENST00000448926 WDR62O43379 1518 aa6.04□□□□□ -1.44
LMBR1-212ENST00000448926 JPH4Q96JJ6 628 aa6.04□□□□□ -1.44
LMBR1-212ENST00000448926 PRG4Q92954 1404 aaPredicted RBP6.04□□□□□ -1.44
LMBR1-212ENST00000448926 GRIN2AQ12879 1464 aa6.04□□□□□ -1.44
LMBR1-212ENST00000448926 EPRSP07814 1512 aaKnown RBP6.04□□□□□ -1.44
LMBR1-212ENST00000448926 KDM6BO15054 1643 aa6.03□□□□□ -1.44
LMBR1-212ENST00000448926 MYOM3Q5VTT5 1437 aa6.03□□□□□ -1.44
LMBR1-212ENST00000448926 CCDC18Q5T9S5 1454 aa6.03□□□□□ -1.44
LMBR1-212ENST00000448926 DISP1Q96F81 1524 aa6.03□□□□□ -1.44
LMBR1-212ENST00000448926 CEP170Q5SW79 1584 aa6.02□□□□□ -1.44
LMBR1-212ENST00000448926 SENP3-EIF4A1A0A087X0R7 540 aa6.02□□□□□ -1.45
LMBR1-212ENST00000448926 ZNF326Q5BKZ1 582 aaKnown RBP6.02□□□□□ -1.45
LMBR1-212ENST00000448926 MAP3K1Q13233 1512 aa6.01□□□□□ -1.45
LMBR1-212ENST00000448926 PTPN23Q9H3S7 1636 aa6.01□□□□□ -1.45
LMBR1-212ENST00000448926 NUP153P49790 1475 aaKnown RBP6.01□□□□□ -1.45
LMBR1-212ENST00000448926 SUPT6HQ7KZ85 1726 aaKnown RBP6.01□□□□□ -1.45
LMBR1-212ENST00000448926 NAIPQ13075 1403 aa6□□□□□ -1.45
LMBR1-212ENST00000448926 POLR3GLQ9BT43 218 aa6□□□□□ -1.45
LMBR1-212ENST00000448926 CFDP1Q9UEE9 299 aaPredicted RBP6□□□□□ -1.45
LMBR1-212ENST00000448926 CENPBP07199 599 aaPredicted RBP6□□□□□ -1.45
LMBR1-212ENST00000448926 KIAA0556O60303 1618 aa6□□□□□ -1.45
LMBR1-212ENST00000448926 TONSLQ96HA7 1378 aa5.99□□□□□ -1.45
LMBR1-212ENST00000448926 KIAA0586Q9BVV6 1533 aa5.99□□□□□ -1.45
LMBR1-212ENST00000448926 HECW1Q76N89 1606 aa5.99□□□□□ -1.45
LMBR1-212ENST00000448926 UGGT2Q9NYU1 1516 aa5.99□□□□□ -1.45
LMBR1-212ENST00000448926 EHBP1L1Q8N3D4 1523 aa5.99□□□□□ -1.45
LMBR1-212ENST00000448926 HNRNPMP52272 730 aaKnown RBP eCLIP5.99□□□□□ -1.457e-7■■■■■ 34.7
LMBR1-212ENST00000448926 KIF14Q15058 1648 aa5.98□□□□□ -1.45
LMBR1-212ENST00000448926 SYNJ2O15056 1496 aa5.98□□□□□ -1.45
LMBR1-212ENST00000448926 ERCC6L2Q5T890 1561 aa5.98□□□□□ -1.45
LMBR1-212ENST00000448926 PPP1R15AO75807 674 aaPredicted RBP5.98□□□□□ -1.45
LMBR1-212ENST00000448926 MPHOSPH9Q99550 1183 aa5.97□□□□□ -1.45
LMBR1-212ENST00000448926 SLC4A1APQ9BWU0 796 aaKnown RBP5.97□□□□□ -1.45
LMBR1-212ENST00000448926 CLSPNQ9HAW4 1339 aa5.97□□□□□ -1.45
LMBR1-212ENST00000448926 HFM1A2PYH4 1435 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms