RNA–Protein interactions for RNA: ENST00000448582.6

FAM60A-202, Transcript of Protein FAM60A, humanhuman

TSL 1 (best)

Gene FAM60A, Length 3,111 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-202ENST00000448582 SCAF1Q9H7N4 1312 aaKnown RBP8.7□□□□□ -1.02
FAM60A-202ENST00000448582 SPATA31D1Q6ZQQ2 1576 aa8.7□□□□□ -1.02
FAM60A-202ENST00000448582 UBE2Q2Q8WVN8 375 aa8.7□□□□□ -1.02
FAM60A-202ENST00000448582 CNKSR2Q8WXI2 1034 aa8.7□□□□□ -1.02
FAM60A-202ENST00000448582 MRC2Q9UBG0 1479 aa8.68□□□□□ -1.02
FAM60A-202ENST00000448582 WDR97A6NE52 1622 aa8.68□□□□□ -1.02
FAM60A-202ENST00000448582 KIF21AQ7Z4S6 1674 aa8.68□□□□□ -1.02
FAM60A-202ENST00000448582 TRHP20396 242 aaPredicted RBP8.67□□□□□ -1.02
FAM60A-202ENST00000448582 PDE4CQ08493 712 aa8.67□□□□□ -1.02
FAM60A-202ENST00000448582 ARAP1Q96P48 1450 aa8.65□□□□□ -1.02
FAM60A-202ENST00000448582 FBXO3Q9UK99 471 aa8.65□□□□□ -1.02
FAM60A-202ENST00000448582 DCAF8L2P0C7V8 631 aa8.64□□□□□ -1.03
FAM60A-202ENST00000448582 HECW2Q9P2P5 1572 aa8.63□□□□□ -1.03
FAM60A-202ENST00000448582 PDS5BQ9NTI5 1447 aa8.61□□□□□ -1.03
FAM60A-202ENST00000448582 BCL11BQ9C0K0 894 aaPredicted RBP8.6□□□□□ -1.03
FAM60A-202ENST00000448582 BAZ1BQ9UIG0 1483 aaKnown RBP8.59□□□□□ -1.03
FAM60A-202ENST00000448582 IRX6P78412 446 aaPredicted RBP8.59□□□□□ -1.03
FAM60A-202ENST00000448582 VSIG10Q8N0Z9 540 aa8.58□□□□□ -1.04
FAM60A-202ENST00000448582 IQSEC2Q5JU85 1478 aa8.57□□□□□ -1.04
FAM60A-202ENST00000448582 PEG3Q9GZU2 1588 aa8.56□□□□□ -1.04
FAM60A-202ENST00000448582 ARID3AQ99856 593 aa8.55□□□□□ -1.04
FAM60A-202ENST00000448582 NESP48681 1621 aa8.54□□□□□ -1.04
FAM60A-202ENST00000448582 KIF13AQ9H1H9 1805 aa8.54□□□□□ -1.04
FAM60A-202ENST00000448582 ZCCHC6Q5VYS8 1495 aaKnown RBP8.53□□□□□ -1.04
FAM60A-202ENST00000448582 TOP2BQ02880 1626 aa8.53□□□□□ -1.04
FAM60A-202ENST00000448582 CCDC136Q96JN2 1154 aa8.52□□□□□ -1.05
FAM60A-202ENST00000448582 MAPK8IP2Q13387 824 aaPredicted RBP8.51□□□□□ -1.05
FAM60A-202ENST00000448582 CLASP1Q7Z460 1538 aa8.51□□□□□ -1.05
FAM60A-202ENST00000448582 CDK11BP21127 795 aaKnown RBP8.51□□□□□ -1.05
FAM60A-202ENST00000448582 CDK11AQ9UQ88 783 aaPredicted RBP8.51□□□□□ -1.05
FAM60A-202ENST00000448582 ZNF428Q96B54 188 aa8.5□□□□□ -1.05
FAM60A-202ENST00000448582 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.49□□□□□ -1.05
FAM60A-202ENST00000448582 RNF216Q9NWF9 866 aaPredicted RBP8.47□□□□□ -1.05
FAM60A-202ENST00000448582 PKNOX2Q96KN3 472 aa8.47□□□□□ -1.05
FAM60A-202ENST00000448582 BRD2P25440 801 aaKnown RBP8.45□□□□□ -1.06
FAM60A-202ENST00000448582 NECTIN2Q92692 538 aa8.45□□□□□ -1.06
FAM60A-202ENST00000448582 PRDM2Q13029 1718 aa8.43□□□□□ -1.06
FAM60A-202ENST00000448582 TAF7LQ5H9L4 462 aa8.4□□□□□ -1.06
FAM60A-202ENST00000448582 POLR3GLQ9BT43 218 aa8.4□□□□□ -1.06
FAM60A-202ENST00000448582 ANO8Q9HCE9 1232 aaPredicted RBP8.4□□□□□ -1.06
FAM60A-202ENST00000448582 DMRT2Q9Y5R5 561 aa8.4□□□□□ -1.06
FAM60A-202ENST00000448582 TSHZ2Q9NRE2 1034 aa8.4□□□□□ -1.07
FAM60A-202ENST00000448582 CHD1O14646 1710 aa8.38□□□□□ -1.07
FAM60A-202ENST00000448582 A0A0U1RQG5 324 aaPredicted RBP8.38□□□□□ -1.07
FAM60A-202ENST00000448582 HOXD11P31277 338 aaPredicted RBP8.38□□□□□ -1.07
FAM60A-202ENST00000448582 C1orf115Q9H7X2 142 aa8.36□□□□□ -1.07
FAM60A-202ENST00000448582 PAXIP1Q6ZW49 1069 aaPredicted RBP8.36□□□□□ -1.07
FAM60A-202ENST00000448582 MAPKBP1O60336 1514 aa8.34□□□□□ -1.07
FAM60A-202ENST00000448582 NEFLP07196 543 aa8.34□□□□□ -1.08
FAM60A-202ENST00000448582 IFT140Q96RY7 1462 aa8.33□□□□□ -1.08
FAM60A-202ENST00000448582 FGD1P98174 961 aa8.33□□□□□ -1.08
FAM60A-202ENST00000448582 BRPF3Q9ULD4 1205 aa8.32□□□□□ -1.08
FAM60A-202ENST00000448582 FOXD4L1Q9NU39 408 aa8.32□□□□□ -1.08
FAM60A-202ENST00000448582 ATAD2BQ9ULI0 1458 aa8.31□□□□□ -1.08
FAM60A-202ENST00000448582 SYNJ1O43426 1573 aa8.3□□□□□ -1.08
FAM60A-202ENST00000448582 NPM1P06748 294 aaKnown RBP eCLIP8.3□□□□□ -1.08
FAM60A-202ENST00000448582 SYNJ2O15056 1496 aa8.29□□□□□ -1.08
FAM60A-202ENST00000448582 ARID3CA6NKF2 412 aa8.29□□□□□ -1.08
FAM60A-202ENST00000448582 SCRIBQ14160 1630 aa8.28□□□□□ -1.08
FAM60A-202ENST00000448582 KDM4FA0A1W2PPD8 638 aa8.28□□□□□ -1.08
FAM60A-202ENST00000448582 ADGRL1O94910 1474 aa8.26□□□□□ -1.09
FAM60A-202ENST00000448582 HSP90B1P14625 803 aaKnown RBP8.25□□□□□ -1.09
FAM60A-202ENST00000448582 ILDR2Q71H61 639 aa8.25□□□□□ -1.09
FAM60A-202ENST00000448582 NBR1Q14596 966 aa8.25□□□□□ -1.09
FAM60A-202ENST00000448582 CCDC9Q9Y3X0 531 aaKnown RBP8.25□□□□□ -1.09
FAM60A-202ENST00000448582 TMED8Q6PL24 325 aaPredicted RBP8.24□□□□□ -1.09
FAM60A-202ENST00000448582 CEP164Q9UPV0 1460 aa8.24□□□□□ -1.09
FAM60A-202ENST00000448582 GLI2P10070 1586 aa8.23□□□□□ -1.09
FAM60A-202ENST00000448582 FOXD4L5Q5VV16 416 aaPredicted RBP8.22□□□□□ -1.09
FAM60A-202ENST00000448582 FOXD4L4Q8WXT5 416 aaPredicted RBP8.22□□□□□ -1.09
FAM60A-202ENST00000448582 ZFP91Q96JP5 570 aaPredicted RBP8.22□□□□□ -1.09
FAM60A-202ENST00000448582 DISP3Q9P2K9 1392 aa8.22□□□□□ -1.09
FAM60A-202ENST00000448582 DIP2BQ9P265 1576 aa8.21□□□□□ -1.1
FAM60A-202ENST00000448582 ABCC8Q09428 1581 aa8.2□□□□□ -1.1
FAM60A-202ENST00000448582 ABCC10Q5T3U5 1492 aa8.19□□□□□ -1.1
FAM60A-202ENST00000448582 EIF4G3O43432 1585 aaKnown RBP8.19□□□□□ -1.1
FAM60A-202ENST00000448582 ZNF692Q9BU19 519 aaPredicted RBP8.19□□□□□ -1.1
FAM60A-202ENST00000448582 SHROOM2Q13796 1616 aa8.19□□□□□ -1.1
FAM60A-202ENST00000448582 SLC4A2P04920 1241 aa8.18□□□□□ -1.1
FAM60A-202ENST00000448582 ZEB1P37275 1124 aaPredicted RBP8.18□□□□□ -1.1
FAM60A-202ENST00000448582 BRPF1P55201 1214 aaPredicted RBP8.18□□□□□ -1.1
FAM60A-202ENST00000448582 PKD2Q13563 968 aa8.16□□□□□ -1.1
FAM60A-202ENST00000448582 SMARCA4P51532 1647 aa8.16□□□□□ -1.1
FAM60A-202ENST00000448582 KIAA0586Q9BVV6 1533 aa8.16□□□□□ -1.1
FAM60A-202ENST00000448582 ZNF592Q92610 1267 aa8.15□□□□□ -1.1
FAM60A-202ENST00000448582 CWC22Q9HCG8 908 aaKnown RBP8.15□□□□□ -1.1
FAM60A-202ENST00000448582 PRDM10Q9NQV6 1147 aa8.15□□□□□ -1.1
FAM60A-202ENST00000448582 MTMR7Q9Y216 660 aa8.14□□□□□ -1.11
FAM60A-202ENST00000448582 CADPSQ9ULU8 1353 aa8.13□□□□□ -1.11
FAM60A-202ENST00000448582 RBM25P49756 843 aaKnown RBP8.13□□□□□ -1.11
FAM60A-202ENST00000448582 PUS7Q96PZ0 661 aaKnown RBP8.13□□□□□ -1.11
FAM60A-202ENST00000448582 SNAPC4Q5SXM2 1469 aa8.13□□□□□ -1.11
FAM60A-202ENST00000448582 PPARGC1BQ86YN6 1023 aaKnown RBP8.12□□□□□ -1.11
FAM60A-202ENST00000448582 PCF11O94913 1555 aaKnown RBP8.11□□□□□ -1.11
FAM60A-202ENST00000448582 RAD21O60216 631 aa8.11□□□□□ -1.11
FAM60A-202ENST00000448582 ZNF526Q8TF50 670 aaPredicted RBP8.11□□□□□ -1.11
FAM60A-202ENST00000448582 ADAMTSL3P82987 1691 aa8.1□□□□□ -1.11
FAM60A-202ENST00000448582 KCTD17Q8N5Z5 321 aa8.09□□□□□ -1.11
FAM60A-202ENST00000448582 ZNF608Q9ULD9 1512 aaPredicted RBP8.08□□□□□ -1.12
FAM60A-202ENST00000448582 ZBTB7CA1YPR0 619 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms