RNA–Protein interactions for RNA: ENST00000448582.6

FAM60A-202, Transcript of Protein FAM60A, humanhuman

TSL 1 (best)

Gene FAM60A, Length 3,111 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-202ENST00000448582 CHIC1Q5VXU3 224 aa12.39□□□□□ -0.43
FAM60A-202ENST00000448582 AEBP2Q6ZN18 517 aaPredicted RBP12.37□□□□□ -0.43
FAM60A-202ENST00000448582 SLC24A1O60721 1099 aa11.46□□□□□ -0.57
FAM60A-202ENST00000448582 DNAJC5Q9H3Z4 198 aa11.01□□□□□ -0.65
FAM60A-202ENST00000448582 PHF23Q9BUL5 403 aaPredicted RBP10.93□□□□□ -0.66
FAM60A-202ENST00000448582 EHMT2Q96KQ7 1210 aa10.74□□□□□ -0.69
FAM60A-202ENST00000448582 PLPPR3Q6T4P5 718 aa10.67□□□□□ -0.7
FAM60A-202ENST00000448582 SENP3Q9H4L4 574 aaPredicted RBP10.44□□□□□ -0.74
FAM60A-202ENST00000448582 RTN4Q9NQC3 1192 aaKnown RBP10.42□□□□□ -0.74
FAM60A-202ENST00000448582 NISCHQ9Y2I1 1504 aa10.35□□□□□ -0.75
FAM60A-202ENST00000448582 CCDC180Q9P1Z9 1646 aa10.31□□□□□ -0.76
FAM60A-202ENST00000448582 PRKCSHP14314 528 aaPredicted RBP10.31□□□□□ -0.76
FAM60A-202ENST00000448582 DAXXQ9UER7 740 aaPredicted RBP10.3□□□□□ -0.76
FAM60A-202ENST00000448582 DNAJC5BQ9UF47 199 aa10.3□□□□□ -0.76
FAM60A-202ENST00000448582 SHROOM4Q9ULL8 1493 aa10.3□□□□□ -0.76
FAM60A-202ENST00000448582 CUX2O14529 1486 aa10.25□□□□□ -0.77
FAM60A-202ENST00000448582 ABCC9O60706 1549 aa10.07□□□□□ -0.8
FAM60A-202ENST00000448582 NCBP3Q53F19 620 aaKnown RBP10.04□□□□□ -0.8
FAM60A-202ENST00000448582 APLP2Q06481 763 aa10□□□□□ -0.81
FAM60A-202ENST00000448582 RB1CC1Q8TDY2 1594 aa9.99□□□□□ -0.81
FAM60A-202ENST00000448582 KCNA4P22459 653 aa9.94□□□□□ -0.82
FAM60A-202ENST00000448582 TIMELESSQ9UNS1 1208 aa9.92□□□□□ -0.82
FAM60A-202ENST00000448582 CSRNP3Q8WYN3 585 aa9.79□□□□□ -0.84
FAM60A-202ENST00000448582 NACADO15069 1562 aa9.77□□□□□ -0.85
FAM60A-202ENST00000448582 ERICH6Q7L0X2 663 aa9.75□□□□□ -0.85
FAM60A-202ENST00000448582 TULP1O00294 542 aaPredicted RBP9.72□□□□□ -0.85
FAM60A-202ENST00000448582 KLHL34Q8N239 644 aa9.72□□□□□ -0.85
FAM60A-202ENST00000448582 MYT1Q01538 1121 aa9.71□□□□□ -0.85
FAM60A-202ENST00000448582 PELP1Q8IZL8 1130 aaKnown RBP9.71□□□□□ -0.85
FAM60A-202ENST00000448582 MYO15BQ96JP2 1530 aa9.69□□□□□ -0.86
FAM60A-202ENST00000448582 AMER1Q5JTC6 1135 aaPredicted RBP9.69□□□□□ -0.86
FAM60A-202ENST00000448582 UNC13AQ9UPW8 1703 aa9.67□□□□□ -0.86
FAM60A-202ENST00000448582 TTBK1Q5TCY1 1321 aaPredicted RBP9.67□□□□□ -0.86
FAM60A-202ENST00000448582 FOXD1Q16676 465 aa9.64□□□□□ -0.87
FAM60A-202ENST00000448582 PLEKHG5O94827 1062 aa9.61□□□□□ -0.87
FAM60A-202ENST00000448582 CC2D2AQ9P2K1 1620 aa9.59□□□□□ -0.87
FAM60A-202ENST00000448582 CECR2Q9BXF3 1484 aa9.58□□□□□ -0.88
FAM60A-202ENST00000448582 BICRAQ9NZM4 1560 aa9.55□□□□□ -0.88
FAM60A-202ENST00000448582 ARXQ96QS3 562 aa9.55□□□□□ -0.88
FAM60A-202ENST00000448582 EIF5BO60841 1220 aaKnown RBP9.53□□□□□ -0.88
FAM60A-202ENST00000448582 TAOK2Q9UL54 1235 aa9.53□□□□□ -0.88
FAM60A-202ENST00000448582 PPP6R1Q9UPN7 881 aa9.51□□□□□ -0.89
FAM60A-202ENST00000448582 ADRA2BP18089 450 aa9.49□□□□□ -0.89
FAM60A-202ENST00000448582 TPRNQ4KMQ1 711 aa9.46□□□□□ -0.9
FAM60A-202ENST00000448582 PODXL2Q9NZ53 605 aa9.45□□□□□ -0.9
FAM60A-202ENST00000448582 ERCC6L2Q5T890 1561 aa9.36□□□□□ -0.91
FAM60A-202ENST00000448582 RANGAP1P46060 587 aaPredicted RBP9.35□□□□□ -0.91
FAM60A-202ENST00000448582 EIF4G1Q04637 1599 aaKnown RBP9.34□□□□□ -0.91
FAM60A-202ENST00000448582 HOMEZQ8IX15 550 aa9.31□□□□□ -0.92
FAM60A-202ENST00000448582 THOC2Q8NI27 1593 aaKnown RBP9.3□□□□□ -0.92
FAM60A-202ENST00000448582 GTF3C3Q9Y5Q9 886 aa9.18□□□□□ -0.94
FAM60A-202ENST00000448582 BCANQ96GW7 911 aa9.17□□□□□ -0.94
FAM60A-202ENST00000448582 ILDR1Q86SU0 546 aaPredicted RBP9.16□□□□□ -0.94
FAM60A-202ENST00000448582 BAZ1AQ9NRL2 1556 aaPredicted RBP9.15□□□□□ -0.94
FAM60A-202ENST00000448582 RIMBP3CA6NJZ7 1639 aa9.15□□□□□ -0.95
FAM60A-202ENST00000448582 RIMBP3BA6NNM3 1639 aa9.15□□□□□ -0.95
FAM60A-202ENST00000448582 RIMBP3Q9UFD9 1639 aa9.15□□□□□ -0.95
FAM60A-202ENST00000448582 PABPN1Q86U42 306 aaKnown RBP eCLIP9.14□□□□□ -0.95
FAM60A-202ENST00000448582 LOC105371045A0A1W2PR82 267 aa9.13□□□□□ -0.95
FAM60A-202ENST00000448582 NPM2Q86SE8 214 aaKnown RBP9.13□□□□□ -0.95
FAM60A-202ENST00000448582 C14orf37Q86TY3 774 aa9.13□□□□□ -0.95
FAM60A-202ENST00000448582 PIAS4Q8N2W9 510 aaPredicted RBP9.12□□□□□ -0.95
FAM60A-202ENST00000448582 PLCB2Q00722 1185 aa9.11□□□□□ -0.95
FAM60A-202ENST00000448582 HAP1P54257 671 aaPredicted RBP9.11□□□□□ -0.95
FAM60A-202ENST00000448582 BCL11AQ9H165 835 aa9.09□□□□□ -0.95
FAM60A-202ENST00000448582 TRIM26Q12899 539 aaPredicted RBP9.08□□□□□ -0.96
FAM60A-202ENST00000448582 SUPT5HO00267 1087 aaKnown RBP9.06□□□□□ -0.96
FAM60A-202ENST00000448582 SLC4A1APQ9BWU0 796 aaKnown RBP9.05□□□□□ -0.96
FAM60A-202ENST00000448582 ZBTB22O15209 634 aa9.04□□□□□ -0.96
FAM60A-202ENST00000448582 TRIM41Q8WV44 630 aa9.04□□□□□ -0.96
FAM60A-202ENST00000448582 UBTFP17480 764 aaKnown RBP9□□□□□ -0.97
FAM60A-202ENST00000448582 SOCS7O14512 581 aa9□□□□□ -0.97
FAM60A-202ENST00000448582 PPP4R3CPQ6ZMV5 832 aa8.99□□□□□ -0.97
FAM60A-202ENST00000448582 ERCC6Q03468 1493 aa8.99□□□□□ -0.97
FAM60A-202ENST00000448582 FAM9AQ8IZU1 332 aaPredicted RBP8.98□□□□□ -0.97
FAM60A-202ENST00000448582 TMEM132AQ24JP5 1023 aa8.97□□□□□ -0.97
FAM60A-202ENST00000448582 HRCP23327 699 aa8.97□□□□□ -0.97
FAM60A-202ENST00000448582 LAMC3Q9Y6N6 1575 aa8.97□□□□□ -0.97
FAM60A-202ENST00000448582 FBLN2P98095 1184 aa8.94□□□□□ -0.98
FAM60A-202ENST00000448582 KDM2AQ9Y2K7 1162 aa8.93□□□□□ -0.98
FAM60A-202ENST00000448582 WDR62O43379 1518 aa8.92□□□□□ -0.98
FAM60A-202ENST00000448582 DCAF1Q9Y4B6 1507 aa8.91□□□□□ -0.98
FAM60A-202ENST00000448582 DHX37Q8IY37 1157 aaKnown RBP8.9□□□□□ -0.98
FAM60A-202ENST00000448582 FBXO41Q8TF61 875 aa8.88□□□□□ -0.99
FAM60A-202ENST00000448582 ARHGEF11O15085 1522 aa8.87□□□□□ -0.99
FAM60A-202ENST00000448582 HMGXB3Q12766 1538 aa8.87□□□□□ -0.99
FAM60A-202ENST00000448582 CHMP4AQ9BY43 222 aa8.87□□□□□ -0.99
FAM60A-202ENST00000448582 RSF1Q96T23 1441 aaPredicted RBP8.86□□□□□ -0.99
FAM60A-202ENST00000448582 PDIA4P13667 645 aaKnown RBP8.85□□□□□ -0.99
FAM60A-202ENST00000448582 LMTK3Q96Q04 1460 aa8.85□□□□□ -0.99
FAM60A-202ENST00000448582 NCAPD3P42695 1498 aa8.8□□□□□ -1
FAM60A-202ENST00000448582 SMARCA2P51531 1590 aa8.79□□□□□ -1
FAM60A-202ENST00000448582 MSH5O43196 834 aa8.78□□□□□ -1
FAM60A-202ENST00000448582 CFAP44Q96MT7 982 aa8.78□□□□□ -1
FAM60A-202ENST00000448582 SAMD1Q6SPF0 538 aaPredicted RBP8.77□□□□□ -1.01
FAM60A-202ENST00000448582 KDM6BO15054 1643 aa8.76□□□□□ -1.01
FAM60A-202ENST00000448582 IGSF3O75054 1194 aa8.76□□□□□ -1.01
FAM60A-202ENST00000448582 FKBP8Q14318 412 aa8.74□□□□□ -1.01
FAM60A-202ENST00000448582 NPM3O75607 178 aaKnown RBP8.73□□□□□ -1.01
FAM60A-202ENST00000448582 OSCARQ8IYS5 282 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms