RNA–Protein interactions for RNA: ENST00000447480.5

TRIM4-204, Transcript of tripartite motif containing 4, humanhuman

TSL 3

Gene TRIM4, Length 639 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-204ENST00000447480 SPDYE6P0CI01 402 aa12.05□□□□□ -0.48
TRIM4-204ENST00000447480 MYT1Q01538 1121 aa12.05□□□□□ -0.48
TRIM4-204ENST00000447480 SPDYE2Q495Y8 402 aa12.05□□□□□ -0.48
TRIM4-204ENST00000447480 CUX2O14529 1486 aa12.05□□□□□ -0.48
TRIM4-204ENST00000447480 DNMBPQ6XZF7 1577 aa12.05□□□□□ -0.48
TRIM4-204ENST00000447480 WDR62O43379 1518 aa12.04□□□□□ -0.48
TRIM4-204ENST00000447480 THOC2Q8NI27 1593 aaKnown RBP12.04□□□□□ -0.48
TRIM4-204ENST00000447480 AKT1S1Q96B36 256 aa12.01□□□□□ -0.49
TRIM4-204ENST00000447480 PCGF6Q9BYE7 350 aa12.01□□□□□ -0.49
TRIM4-204ENST00000447480 TRIM26Q12899 539 aaPredicted RBP12□□□□□ -0.49
TRIM4-204ENST00000447480 WRNQ14191 1432 aaPredicted RBP eCLIP12□□□□□ -0.49
TRIM4-204ENST00000447480 ZNF692Q9BU19 519 aaPredicted RBP11.99□□□□□ -0.49
TRIM4-204ENST00000447480 BIVM-ERCC5R4GMW8 1640 aa11.98□□□□□ -0.49
TRIM4-204ENST00000447480 TOP2BQ02880 1626 aa11.97□□□□□ -0.49
TRIM4-204ENST00000447480 TOPBP1Q92547 1522 aa11.97□□□□□ -0.49
TRIM4-204ENST00000447480 WDR97A6NE52 1622 aa11.96□□□□□ -0.5
TRIM4-204ENST00000447480 URB2Q14146 1524 aaKnown RBP11.95□□□□□ -0.5
TRIM4-204ENST00000447480 SSUH2Q9Y2M2 353 aa11.94□□□□□ -0.5
TRIM4-204ENST00000447480 REM2Q8IYK8 340 aaPredicted RBP11.93□□□□□ -0.5
TRIM4-204ENST00000447480 IFT140Q96RY7 1462 aa11.93□□□□□ -0.5
TRIM4-204ENST00000447480 CUX1P39880 1505 aa11.91□□□□□ -0.5
TRIM4-204ENST00000447480 SPDYE4A6NLX3 237 aa11.89□□□□□ -0.51
TRIM4-204ENST00000447480 FGD5Q6ZNL6 1462 aa11.89□□□□□ -0.51
TRIM4-204ENST00000447480 TRIM41Q8WV44 630 aa11.88□□□□□ -0.51
TRIM4-204ENST00000447480 POLA1P09884 1462 aaPredicted RBP11.88□□□□□ -0.51
TRIM4-204ENST00000447480 SYNJ1O43426 1573 aa11.88□□□□□ -0.51
TRIM4-204ENST00000447480 SOGA1O94964 1423 aa11.86□□□□□ -0.51
TRIM4-204ENST00000447480 ABCA10Q8WWZ4 1543 aa11.83□□□□□ -0.52
TRIM4-204ENST00000447480 TARBP1Q13395 1621 aaKnown RBP11.82□□□□□ -0.52
TRIM4-204ENST00000447480 EEA1Q15075 1411 aa11.8□□□□□ -0.52
TRIM4-204ENST00000447480 PITPNM1O00562 1244 aa11.8□□□□□ -0.52
TRIM4-204ENST00000447480 CHRDL2Q6WN34 429 aa11.8□□□□□ -0.52
TRIM4-204ENST00000447480 KIF27Q86VH2 1401 aa11.79□□□□□ -0.52
TRIM4-204ENST00000447480 EIF4G3O43432 1585 aaKnown RBP11.75□□□□□ -0.53
TRIM4-204ENST00000447480 GRIN2BQ13224 1484 aa11.75□□□□□ -0.53
TRIM4-204ENST00000447480 GAPVD1Q14C86 1478 aa11.75□□□□□ -0.53
TRIM4-204ENST00000447480 ERICH3Q5RHP9 1530 aa11.75□□□□□ -0.53
TRIM4-204ENST00000447480 ABCA5Q8WWZ7 1642 aa11.75□□□□□ -0.53
TRIM4-204ENST00000447480 FKBP8Q14318 412 aa11.74□□□□□ -0.53
TRIM4-204ENST00000447480 PPARGC1BQ86YN6 1023 aaKnown RBP11.74□□□□□ -0.53
TRIM4-204ENST00000447480 SPDYE1Q8NFV5 336 aaPredicted RBP11.74□□□□□ -0.53
TRIM4-204ENST00000447480 RAD54L2Q9Y4B4 1467 aa11.74□□□□□ -0.53
TRIM4-204ENST00000447480 PBRM1Q86U86 1689 aa11.74□□□□□ -0.53
TRIM4-204ENST00000447480 CUL7Q14999 1698 aa11.73□□□□□ -0.53
TRIM4-204ENST00000447480 CLEC11AQ9Y240 323 aa11.73□□□□□ -0.53
TRIM4-204ENST00000447480 MAGI1Q96QZ7 1491 aaPredicted RBP11.72□□□□□ -0.53
TRIM4-204ENST00000447480 TDRD9Q8NDG6 1382 aaKnown RBP11.67□□□□□ -0.54
TRIM4-204ENST00000447480 ZNF608Q9ULD9 1512 aaPredicted RBP11.67□□□□□ -0.54
TRIM4-204ENST00000447480 AQRO60306 1485 aaKnown RBP eCLIP11.66□□□□□ -0.549e-7■■■■□ 26.7
TRIM4-204ENST00000447480 FHAD1B1AJZ9 1412 aa11.65□□□□□ -0.54
TRIM4-204ENST00000447480 SYNJ2O15056 1496 aa11.64□□□□□ -0.55
TRIM4-204ENST00000447480 POTEHQ6S545 545 aa11.64□□□□□ -0.55
TRIM4-204ENST00000447480 PROM2Q8N271 834 aa11.64□□□□□ -0.55
TRIM4-204ENST00000447480 ADAMTS12P58397 1594 aa11.62□□□□□ -0.55
TRIM4-204ENST00000447480 PIP4P2Q8N4L2 257 aa11.62□□□□□ -0.55
TRIM4-204ENST00000447480 SNAPC4Q5SXM2 1469 aa11.62□□□□□ -0.55
TRIM4-204ENST00000447480 LOC105371045A0A1W2PR82 267 aa11.61□□□□□ -0.55
TRIM4-204ENST00000447480 CHMP7Q8WUX9 453 aaPredicted RBP11.61□□□□□ -0.55
TRIM4-204ENST00000447480 IGF1RP08069 1367 aa11.59□□□□□ -0.55
TRIM4-204ENST00000447480 FXR2P51116 673 aaKnown RBP eCLIP11.59□□□□□ -0.55
TRIM4-204ENST00000447480 RAPGEF2Q9Y4G8 1499 aa11.58□□□□□ -0.56
TRIM4-204ENST00000447480 CARMIL1Q5VZK9 1371 aa11.58□□□□□ -0.56
TRIM4-204ENST00000447480 PRR29P0C7W0 189 aa11.58□□□□□ -0.56
TRIM4-204ENST00000447480 CHD1O14646 1710 aa11.57□□□□□ -0.56
TRIM4-204ENST00000447480 KIF21BO75037 1637 aa11.57□□□□□ -0.56
TRIM4-204ENST00000447480 GRIN2AQ12879 1464 aa11.56□□□□□ -0.56
TRIM4-204ENST00000447480 STAG3Q9UJ98 1225 aa11.55□□□□□ -0.56
TRIM4-204ENST00000447480 PRXQ9BXM0 1461 aa11.53□□□□□ -0.56
TRIM4-204ENST00000447480 CENPBP07199 599 aaPredicted RBP11.53□□□□□ -0.56
TRIM4-204ENST00000447480 FAM9AQ8IZU1 332 aaPredicted RBP11.53□□□□□ -0.56
TRIM4-204ENST00000447480 GOLGA3Q08378 1498 aa11.51□□□□□ -0.57
TRIM4-204ENST00000447480 CTTNBP2Q8WZ74 1663 aa11.51□□□□□ -0.57
TRIM4-204ENST00000447480 ACIN1Q9UKV3 1341 aaKnown RBP11.51□□□□□ -0.57
TRIM4-204ENST00000447480 PRKAR2AP13861 404 aaKnown RBP11.5□□□□□ -0.57
TRIM4-204ENST00000447480 RUSC2Q8N2Y8 1516 aa11.5□□□□□ -0.57
TRIM4-204ENST00000447480 NUP160Q12769 1436 aa11.48□□□□□ -0.57
TRIM4-204ENST00000447480 KIAA0586Q9BVV6 1533 aa11.47□□□□□ -0.57
TRIM4-204ENST00000447480 CHADLQ6NUI6 762 aa11.47□□□□□ -0.57
TRIM4-204ENST00000447480 IQGAP2Q13576 1575 aa11.45□□□□□ -0.58
TRIM4-204ENST00000447480 CARMIL2Q6F5E8 1435 aa11.43□□□□□ -0.58
TRIM4-204ENST00000447480 UBTFP17480 764 aaKnown RBP11.43□□□□□ -0.58
TRIM4-204ENST00000447480 CLASP1Q7Z460 1538 aa11.43□□□□□ -0.58
TRIM4-204ENST00000447480 CEP170Q5SW79 1584 aa11.42□□□□□ -0.58
TRIM4-204ENST00000447480 SHROOM2Q13796 1616 aa11.4□□□□□ -0.58
TRIM4-204ENST00000447480 CREBZFQ9NS37 354 aa11.4□□□□□ -0.58
TRIM4-204ENST00000447480 EFCAB5A4FU69 1503 aa11.4□□□□□ -0.59
TRIM4-204ENST00000447480 UGGT2Q9NYU1 1516 aa11.38□□□□□ -0.59
TRIM4-204ENST00000447480 TNIKQ9UKE5 1360 aa11.38□□□□□ -0.59
TRIM4-204ENST00000447480 CLSPNQ9HAW4 1339 aa11.37□□□□□ -0.59
TRIM4-204ENST00000447480 JPH4Q96JJ6 628 aa11.36□□□□□ -0.59
TRIM4-204ENST00000447480 TTBK1Q5TCY1 1321 aaPredicted RBP11.35□□□□□ -0.59
TRIM4-204ENST00000447480 FBXO3Q9UK99 471 aa11.33□□□□□ -0.6
TRIM4-204ENST00000447480 FARP1Q9Y4F1 1045 aaPredicted RBP11.32□□□□□ -0.6
TRIM4-204ENST00000447480 PRG4Q92954 1404 aaPredicted RBP11.32□□□□□ -0.6
TRIM4-204ENST00000447480 DIEXFQ68CQ4 756 aaKnown RBP11.31□□□□□ -0.6
TRIM4-204ENST00000447480 SAMD9Q5K651 1589 aa11.31□□□□□ -0.6
TRIM4-204ENST00000447480 KIAA0556O60303 1618 aa11.31□□□□□ -0.6
TRIM4-204ENST00000447480 MIER1Q8N108 512 aa11.3□□□□□ -0.6
TRIM4-204ENST00000447480 ARHGEF11O15085 1522 aa11.3□□□□□ -0.6
TRIM4-204ENST00000447480 FMN1Q68DA7 1419 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms