RNA–Protein interactions for RNA: ENST00000447098.6

PTCH2-203, Transcript of patched 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTCH2, Length 4,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-203ENST00000447098 KANK4Q5T7N3 995 aaPredicted RBP15.96■□□□□ 0.15
PTCH2-203ENST00000447098 RAD54L2Q9Y4B4 1467 aa15.96■□□□□ 0.14
PTCH2-203ENST00000447098 NPM1P06748 294 aaKnown RBP eCLIP15.95■□□□□ 0.14
PTCH2-203ENST00000447098 RRP7BPQ9NSQ0 103 aa15.95■□□□□ 0.14
PTCH2-203ENST00000447098 FGD5Q6ZNL6 1462 aa15.91■□□□□ 0.14
PTCH2-203ENST00000447098 ANP32EQ9BTT0 268 aa15.91■□□□□ 0.14
PTCH2-203ENST00000447098 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.89■□□□□ 0.13
PTCH2-203ENST00000447098 PLEKHD1A6NEE1 506 aa15.89■□□□□ 0.13
PTCH2-203ENST00000447098 ERICH6Q7L0X2 663 aa15.87■□□□□ 0.13
PTCH2-203ENST00000447098 CFTRP13569 1480 aa15.87■□□□□ 0.13
PTCH2-203ENST00000447098 VPS8Q8N3P4 1428 aa15.86■□□□□ 0.13
PTCH2-203ENST00000447098 SYNJ1O43426 1573 aa15.85■□□□□ 0.13
PTCH2-203ENST00000447098 FHOD3Q2V2M9 1422 aa15.84■□□□□ 0.13
PTCH2-203ENST00000447098 SLC4A1APQ9BWU0 796 aaKnown RBP15.83■□□□□ 0.13
PTCH2-203ENST00000447098 IGF1RP08069 1367 aa15.83■□□□□ 0.12
PTCH2-203ENST00000447098 TSPY4P0CV99 314 aa15.82■□□□□ 0.12
PTCH2-203ENST00000447098 TSPY10P0CW01 314 aa15.82■□□□□ 0.12
PTCH2-203ENST00000447098 PLPPR3Q6T4P5 718 aa15.82■□□□□ 0.12
PTCH2-203ENST00000447098 TSHZ2Q9NRE2 1034 aa15.82■□□□□ 0.12
PTCH2-203ENST00000447098 CFDP1Q9UEE9 299 aaPredicted RBP15.81■□□□□ 0.12
PTCH2-203ENST00000447098 FKBP8Q14318 412 aa15.81■□□□□ 0.12
PTCH2-203ENST00000447098 HMGXB3Q12766 1538 aa15.81■□□□□ 0.12
PTCH2-203ENST00000447098 AQRO60306 1485 aaKnown RBP eCLIP15.8■□□□□ 0.12
PTCH2-203ENST00000447098 HIRIP3Q9BW71 556 aaPredicted RBP15.79■□□□□ 0.12
PTCH2-203ENST00000447098 FHAD1B1AJZ9 1412 aa15.77■□□□□ 0.12
PTCH2-203ENST00000447098 BCL11AQ9H165 835 aa15.77■□□□□ 0.11
PTCH2-203ENST00000447098 CHGAP10645 457 aaKnown RBP15.75■□□□□ 0.11
PTCH2-203ENST00000447098 SENP3Q9H4L4 574 aaPredicted RBP15.75■□□□□ 0.11
PTCH2-203ENST00000447098 TONSLQ96HA7 1378 aa15.74■□□□□ 0.11
PTCH2-203ENST00000447098 JPH4Q96JJ6 628 aa15.74■□□□□ 0.11
PTCH2-203ENST00000447098 CUX1P39880 1505 aa15.73■□□□□ 0.11
PTCH2-203ENST00000447098 GAPVD1Q14C86 1478 aa15.73■□□□□ 0.11
PTCH2-203ENST00000447098 CCNB3Q8WWL7 1395 aa15.72■□□□□ 0.11
PTCH2-203ENST00000447098 KDM2AQ9Y2K7 1162 aa15.7■□□□□ 0.1
PTCH2-203ENST00000447098 SIN3AQ96ST3 1273 aa15.69■□□□□ 0.1
PTCH2-203ENST00000447098 DDX10Q13206 875 aaKnown RBP15.67■□□□□ 0.1
PTCH2-203ENST00000447098 TOPBP1Q92547 1522 aa15.66■□□□□ 0.1
PTCH2-203ENST00000447098 POLA1P09884 1462 aaPredicted RBP15.65■□□□□ 0.1
PTCH2-203ENST00000447098 PEG3Q9GZU2 1588 aa15.63■□□□□ 0.09
PTCH2-203ENST00000447098 FMN1Q68DA7 1419 aa15.63■□□□□ 0.09
PTCH2-203ENST00000447098 CARMIL2Q6F5E8 1435 aa15.63■□□□□ 0.09
PTCH2-203ENST00000447098 RGL3Q3MIN7 710 aa15.61■□□□□ 0.09
PTCH2-203ENST00000447098 ANP32CO43423 234 aa15.61■□□□□ 0.09
PTCH2-203ENST00000447098 TOP2BQ02880 1626 aa15.6■□□□□ 0.09
PTCH2-203ENST00000447098 ESF1Q9H501 851 aaKnown RBP15.59■□□□□ 0.09
PTCH2-203ENST00000447098 DHX57Q6P158 1386 aaKnown RBP15.58■□□□□ 0.08
PTCH2-203ENST00000447098 FOXD1Q16676 465 aa15.58■□□□□ 0.08
PTCH2-203ENST00000447098 ARHGAP35Q9NRY4 1499 aa15.57■□□□□ 0.08
PTCH2-203ENST00000447098 RBM19Q9Y4C8 960 aaKnown RBP15.57■□□□□ 0.08
PTCH2-203ENST00000447098 STAG3Q9UJ98 1225 aa15.55■□□□□ 0.08
PTCH2-203ENST00000447098 MRC2Q9UBG0 1479 aa15.55■□□□□ 0.08
PTCH2-203ENST00000447098 ARAP1Q96P48 1450 aa15.52■□□□□ 0.07
PTCH2-203ENST00000447098 PRXQ9BXM0 1461 aa15.51■□□□□ 0.07
PTCH2-203ENST00000447098 KIF21BO75037 1637 aa15.51■□□□□ 0.07
PTCH2-203ENST00000447098 HNRNPMP52272 730 aaKnown RBP eCLIP15.49■□□□□ 0.07
PTCH2-203ENST00000447098 GRIN2BQ13224 1484 aa15.48■□□□□ 0.07
PTCH2-203ENST00000447098 CYB5RLQ6IPT4 315 aa15.48■□□□□ 0.07
PTCH2-203ENST00000447098 DNMBPQ6XZF7 1577 aa15.48■□□□□ 0.07
PTCH2-203ENST00000447098 RAB3GAP2Q9H2M9 1393 aa15.48■□□□□ 0.07
PTCH2-203ENST00000447098 PTPRGP23470 1445 aa15.47■□□□□ 0.07
PTCH2-203ENST00000447098 URB2Q14146 1524 aaKnown RBP15.46■□□□□ 0.07
PTCH2-203ENST00000447098 LAMC3Q9Y6N6 1575 aa15.45■□□□□ 0.06
PTCH2-203ENST00000447098 SETD5Q9C0A6 1442 aa15.44■□□□□ 0.06
PTCH2-203ENST00000447098 TRHP20396 242 aaPredicted RBP15.44■□□□□ 0.06
PTCH2-203ENST00000447098 IRX6P78412 446 aaPredicted RBP15.44■□□□□ 0.06
PTCH2-203ENST00000447098 ZNF644Q9H582 1327 aaPredicted RBP15.43■□□□□ 0.06
PTCH2-203ENST00000447098 OSCARQ8IYS5 282 aa15.43■□□□□ 0.06
PTCH2-203ENST00000447098 MLECQ14165 292 aa15.43■□□□□ 0.06
PTCH2-203ENST00000447098 ARID4BQ4LE39 1312 aaPredicted RBP15.43■□□□□ 0.06
PTCH2-203ENST00000447098 HNRNPUQ00839 825 aaKnown RBP eCLIP15.42■□□□□ 0.06
PTCH2-203ENST00000447098 SNAPC4Q5SXM2 1469 aa15.41■□□□□ 0.06
PTCH2-203ENST00000447098 ZNF608Q9ULD9 1512 aaPredicted RBP15.4■□□□□ 0.06
PTCH2-203ENST00000447098 IFT140Q96RY7 1462 aa15.4■□□□□ 0.06
PTCH2-203ENST00000447098 GGT6Q6P531 493 aa15.39■□□□□ 0.05
PTCH2-203ENST00000447098 ERICH3Q5RHP9 1530 aa15.39■□□□□ 0.05
PTCH2-203ENST00000447098 PHLDB1Q86UU1 1377 aa15.38■□□□□ 0.05
PTCH2-203ENST00000447098 SENP3-EIF4A1A0A087X0R7 540 aa15.38■□□□□ 0.05
PTCH2-203ENST00000447098 PKD2Q13563 968 aa15.38■□□□□ 0.05
PTCH2-203ENST00000447098 EFCAB2Q5VUJ9 269 aa15.38■□□□□ 0.05
PTCH2-203ENST00000447098 ABCA10Q8WWZ4 1543 aa15.38■□□□□ 0.05
PTCH2-203ENST00000447098 EIF4G2P78344 907 aaKnown RBP eCLIP15.37■□□□□ 0.05
PTCH2-203ENST00000447098 CCDC18Q5T9S5 1454 aa15.35■□□□□ 0.05
PTCH2-203ENST00000447098 FAM9BQ8IZU0 186 aa15.35■□□□□ 0.05
PTCH2-203ENST00000447098 SALL2Q9Y467 1007 aaPredicted RBP15.34■□□□□ 0.05
PTCH2-203ENST00000447098 MPHOSPH9Q99550 1183 aa15.34■□□□□ 0.05
PTCH2-203ENST00000447098 CCER2I3L3R5 266 aa15.33■□□□□ 0.04
PTCH2-203ENST00000447098 DCAF11Q8TEB1 546 aa15.32■□□□□ 0.04
PTCH2-203ENST00000447098 PRDM2Q13029 1718 aa15.32■□□□□ 0.04
PTCH2-203ENST00000447098 NUP155O75694 1391 aa15.32■□□□□ 0.04
PTCH2-203ENST00000447098 PRG4Q92954 1404 aaPredicted RBP15.31■□□□□ 0.04
PTCH2-203ENST00000447098 CARD11Q9BXL7 1154 aa15.3■□□□□ 0.04
PTCH2-203ENST00000447098 KIF3BO15066 747 aa15.29■□□□□ 0.04
PTCH2-203ENST00000447098 LRRC9Q6ZRR7 1453 aa15.29■□□□□ 0.04
PTCH2-203ENST00000447098 RTL5Q5HYW3 569 aaPredicted RBP15.28■□□□□ 0.04
PTCH2-203ENST00000447098 CASKIN1Q8WXD9 1431 aa15.27■□□□□ 0.03
PTCH2-203ENST00000447098 NBR1Q14596 966 aa15.26■□□□□ 0.03
PTCH2-203ENST00000447098 ANKRD30AQ9BXX3 1397 aa15.26■□□□□ 0.03
PTCH2-203ENST00000447098 PPP1R15AO75807 674 aaPredicted RBP15.26■□□□□ 0.03
PTCH2-203ENST00000447098 SPAG9O60271 1321 aaKnown RBP15.25■□□□□ 0.03
PTCH2-203ENST00000447098 BIVM-ERCC5R4GMW8 1640 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 192.7 ms