RNA–Protein interactions for RNA: ENST00000446613.6

HDAC11-214, Transcript of histone deacetylase 11, humanhuman

TSL 5 BASIC

Gene HDAC11, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-214ENST00000446613 SETD5Q9C0A6 1442 aa23.32■■□□□ 1.32
HDAC11-214ENST00000446613 PHLDB1Q86UU1 1377 aa23.32■■□□□ 1.32
HDAC11-214ENST00000446613 PPP1R15AO75807 674 aaPredicted RBP23.31■■□□□ 1.32
HDAC11-214ENST00000446613 P3H3Q8IVL6 736 aa23.31■■□□□ 1.32
HDAC11-214ENST00000446613 ATP1B4Q9UN42 357 aaPredicted RBP23.3■■□□□ 1.32
HDAC11-214ENST00000446613 RBM19Q9Y4C8 960 aaKnown RBP23.27■■□□□ 1.32
HDAC11-214ENST00000446613 TIAM1Q13009 1591 aa23.25■■□□□ 1.31
HDAC11-214ENST00000446613 NEFLP07196 543 aa23.22■■□□□ 1.31
HDAC11-214ENST00000446613 LRRC9Q6ZRR7 1453 aa23.2■■□□□ 1.3
HDAC11-214ENST00000446613 IGF1RP08069 1367 aa23.2■■□□□ 1.3
HDAC11-214ENST00000446613 BCL11AQ9H165 835 aa23.19■■□□□ 1.3
HDAC11-214ENST00000446613 ANP32CO43423 234 aa23.17■■□□□ 1.3
HDAC11-214ENST00000446613 IRX6P78412 446 aaPredicted RBP23.13■■□□□ 1.29
HDAC11-214ENST00000446613 CARMIL1Q5VZK9 1371 aa23.1■■□□□ 1.29
HDAC11-214ENST00000446613 CFTRP13569 1480 aa23.1■■□□□ 1.29
HDAC11-214ENST00000446613 CCER2I3L3R5 266 aa23.08■■□□□ 1.29
HDAC11-214ENST00000446613 MSH5O43196 834 aa23.07■■□□□ 1.28
HDAC11-214ENST00000446613 NCAPD3P42695 1498 aa23.06■■□□□ 1.28
HDAC11-214ENST00000446613 PCF11O94913 1555 aaKnown RBP23.04■■□□□ 1.28
HDAC11-214ENST00000446613 MAP3K1Q13233 1512 aa23.04■■□□□ 1.28
HDAC11-214ENST00000446613 FHOD3Q2V2M9 1422 aa23.02■■□□□ 1.28
HDAC11-214ENST00000446613 HMGXB3Q12766 1538 aa23.01■■□□□ 1.27
HDAC11-214ENST00000446613 TONSLQ96HA7 1378 aa23■■□□□ 1.27
HDAC11-214ENST00000446613 HNRNPUQ00839 825 aaKnown RBP eCLIP22.99■■□□□ 1.27
HDAC11-214ENST00000446613 TIMELESSQ9UNS1 1208 aa22.99■■□□□ 1.27
HDAC11-214ENST00000446613 FGD5Q6ZNL6 1462 aa22.96■■□□□ 1.27
HDAC11-214ENST00000446613 FHAD1B1AJZ9 1412 aa22.95■■□□□ 1.27
HDAC11-214ENST00000446613 CFAP43Q8NDM7 1665 aa22.93■■□□□ 1.26
HDAC11-214ENST00000446613 PTPRKQ15262 1439 aa22.9■■□□□ 1.26
HDAC11-214ENST00000446613 CCDC18Q5T9S5 1454 aa22.88■■□□□ 1.25
HDAC11-214ENST00000446613 CCDC184Q52MB2 194 aa22.86■■□□□ 1.25
HDAC11-214ENST00000446613 AQRO60306 1485 aaKnown RBP eCLIP22.84■■□□□ 1.251e-6■■■■■ 29
HDAC11-214ENST00000446613 FGD6Q6ZV73 1430 aa22.84■■□□□ 1.25
HDAC11-214ENST00000446613 WASHC2AQ641Q2 1341 aa22.81■■□□□ 1.24
HDAC11-214ENST00000446613 CDK11AQ9UQ88 783 aaPredicted RBP22.8■■□□□ 1.24
HDAC11-214ENST00000446613 RAD54L2Q9Y4B4 1467 aa22.79■■□□□ 1.24
HDAC11-214ENST00000446613 FYCO1Q9BQS8 1478 aa22.79■■□□□ 1.24
HDAC11-214ENST00000446613 CADPSQ9ULU8 1353 aa22.78■■□□□ 1.24
HDAC11-214ENST00000446613 HSPA5P11021 654 aaKnown RBP22.78■■□□□ 1.24
HDAC11-214ENST00000446613 CASKIN1Q8WXD9 1431 aa22.78■■□□□ 1.24
HDAC11-214ENST00000446613 UACAQ9BZF9 1416 aa22.78■■□□□ 1.24
HDAC11-214ENST00000446613 MTUS2Q5JR59 1369 aa22.77■■□□□ 1.23
HDAC11-214ENST00000446613 CHIC2Q9UKJ5 165 aa22.76■■□□□ 1.23
HDAC11-214ENST00000446613 RRP7BPQ9NSQ0 103 aa22.75■■□□□ 1.23
HDAC11-214ENST00000446613 KDM5BQ9UGL1 1544 aa22.75■■□□□ 1.23
HDAC11-214ENST00000446613 HFM1A2PYH4 1435 aa22.75■■□□□ 1.23
HDAC11-214ENST00000446613 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.74■■□□□ 1.23
HDAC11-214ENST00000446613 PTPN23Q9H3S7 1636 aa22.74■■□□□ 1.23
HDAC11-214ENST00000446613 NAIPQ13075 1403 aa22.74■■□□□ 1.23
HDAC11-214ENST00000446613 PRDM2Q13029 1718 aa22.73■■□□□ 1.23
HDAC11-214ENST00000446613 FANCIQ9NVI1 1328 aa22.73■■□□□ 1.23
HDAC11-214ENST00000446613 FAM9BQ8IZU0 186 aa22.72■■□□□ 1.23
HDAC11-214ENST00000446613 ERICH6Q7L0X2 663 aa22.72■■□□□ 1.23
HDAC11-214ENST00000446613 B4GALNT3Q6L9W6 998 aa22.71■■□□□ 1.23
HDAC11-214ENST00000446613 C11orf95C9JLR9 678 aaPredicted RBP22.7■■□□□ 1.22
HDAC11-214ENST00000446613 FOXD1Q16676 465 aa22.68■■□□□ 1.22
HDAC11-214ENST00000446613 CNGB1Q14028 1251 aaPredicted RBP22.66■■□□□ 1.22
HDAC11-214ENST00000446613 SNAPC4Q5SXM2 1469 aa22.65■■□□□ 1.22
HDAC11-214ENST00000446613 NCOA2Q15596 1464 aa22.64■■□□□ 1.21
HDAC11-214ENST00000446613 EFCAB5A4FU69 1503 aa22.62■■□□□ 1.21
HDAC11-214ENST00000446613 SENP3-EIF4A1A0A087X0R7 540 aa22.62■■□□□ 1.21
HDAC11-214ENST00000446613 PPP4R2Q9NY27 417 aa22.62■■□□□ 1.21
HDAC11-214ENST00000446613 LRRIQ1Q96JM4 1722 aa22.61■■□□□ 1.21
HDAC11-214ENST00000446613 FANCD2Q9BXW9 1451 aa22.61■■□□□ 1.21
HDAC11-214ENST00000446613 FMN1Q68DA7 1419 aa22.61■■□□□ 1.21
HDAC11-214ENST00000446613 EIF4G2P78344 907 aaKnown RBP eCLIP22.61■■□□□ 1.21
HDAC11-214ENST00000446613 DENND4BO75064 1496 aaPredicted RBP22.61■■□□□ 1.21
HDAC11-214ENST00000446613 MYOM3Q5VTT5 1437 aa22.6■■□□□ 1.21
HDAC11-214ENST00000446613 MRS2Q9HD23 443 aa22.6■■□□□ 1.21
HDAC11-214ENST00000446613 L3MBTL2Q969R5 705 aa22.59■■□□□ 1.21
HDAC11-214ENST00000446613 POLA1P09884 1462 aaPredicted RBP22.58■■□□□ 1.21
HDAC11-214ENST00000446613 ARID3CA6NKF2 412 aa22.58■■□□□ 1.2
HDAC11-214ENST00000446613 PRKRIP1Q9H875 184 aaPredicted RBP22.58■■□□□ 1.2
HDAC11-214ENST00000446613 CNTLNQ9NXG0 1405 aa22.55■■□□□ 1.2
HDAC11-214ENST00000446613 KDM6BO15054 1643 aa22.55■■□□□ 1.2
HDAC11-214ENST00000446613 CTTNBP2Q8WZ74 1663 aa22.55■■□□□ 1.2
HDAC11-214ENST00000446613 ABCA10Q8WWZ4 1543 aa22.54■■□□□ 1.2
HDAC11-214ENST00000446613 MPHOSPH9Q99550 1183 aa22.51■■□□□ 1.19
HDAC11-214ENST00000446613 TOPBP1Q92547 1522 aa22.5■■□□□ 1.19
HDAC11-214ENST00000446613 TDRD9Q8NDG6 1382 aaKnown RBP22.5■■□□□ 1.19
HDAC11-214ENST00000446613 NBPF8Q3BBV2 869 aa22.5■■□□□ 1.19
HDAC11-214ENST00000446613 MAGI3Q5TCQ9 1506 aa22.5■■□□□ 1.19
HDAC11-214ENST00000446613 CCDC7Q96M83 1385 aa22.49■■□□□ 1.19
HDAC11-214ENST00000446613 NESP48681 1621 aa22.49■■□□□ 1.19
HDAC11-214ENST00000446613 NBR1Q14596 966 aa22.47■■□□□ 1.19
HDAC11-214ENST00000446613 GRIN2BQ13224 1484 aa22.47■■□□□ 1.19
HDAC11-214ENST00000446613 PAK3O75914 559 aaPredicted RBP22.47■■□□□ 1.19
HDAC11-214ENST00000446613 DNMBPQ6XZF7 1577 aa22.46■■□□□ 1.19
HDAC11-214ENST00000446613 ZBED9Q6R2W3 1325 aa22.46■■□□□ 1.19
HDAC11-214ENST00000446613 SUPT6HQ7KZ85 1726 aaKnown RBP22.45■■□□□ 1.18
HDAC11-214ENST00000446613 ERICH6BQ5W0A0 696 aa22.45■■□□□ 1.18
HDAC11-214ENST00000446613 DEKP35659 375 aaKnown RBP22.44■■□□□ 1.18
HDAC11-214ENST00000446613 NCOA1Q15788 1441 aa22.44■■□□□ 1.18
HDAC11-214ENST00000446613 CC2D2AQ9P2K1 1620 aa22.44■■□□□ 1.18
HDAC11-214ENST00000446613 CUL7Q14999 1698 aa22.44■■□□□ 1.18
HDAC11-214ENST00000446613 AKNAQ7Z591 1439 aa22.43■■□□□ 1.18
HDAC11-214ENST00000446613 POLR3GLQ9BT43 218 aa22.43■■□□□ 1.18
HDAC11-214ENST00000446613 KIF7Q2M1P5 1343 aa22.43■■□□□ 1.18
HDAC11-214ENST00000446613 UGGT2Q9NYU1 1516 aa22.41■■□□□ 1.18
HDAC11-214ENST00000446613 SAMD9Q5K651 1589 aa22.39■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms