RNA–Protein interactions for RNA: ENST00000446593.1

LINC01880-201, Transcript of long intergenic non-protein coding RNA 1880, humanhuman

TSL 4 BASIC

Gene LINC01880, Length 561 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01880-201ENST00000446593 GRIN2BQ13224 1484 aa10.76□□□□□ -0.69
LINC01880-201ENST00000446593 SYNJ2O15056 1496 aa10.75□□□□□ -0.69
LINC01880-201ENST00000446593 GAPVD1Q14C86 1478 aa10.75□□□□□ -0.69
LINC01880-201ENST00000446593 WDR97A6NE52 1622 aa10.73□□□□□ -0.69
LINC01880-201ENST00000446593 FGD5Q6ZNL6 1462 aa10.72□□□□□ -0.69
LINC01880-201ENST00000446593 CAPN15O75808 1086 aa10.66□□□□□ -0.7
LINC01880-201ENST00000446593 CUX1P39880 1505 aa10.63□□□□□ -0.71
LINC01880-201ENST00000446593 NPM1P06748 294 aaKnown RBP eCLIP10.63□□□□□ -0.71
LINC01880-201ENST00000446593 FAM69CQ0P6D2 419 aa10.61□□□□□ -0.71
LINC01880-201ENST00000446593 SPINK5Q9NQ38 1064 aaPredicted RBP10.61□□□□□ -0.71
LINC01880-201ENST00000446593 GRIN2AQ12879 1464 aa10.6□□□□□ -0.71
LINC01880-201ENST00000446593 ABCA10Q8WWZ4 1543 aa10.59□□□□□ -0.71
LINC01880-201ENST00000446593 NUP160Q12769 1436 aa10.58□□□□□ -0.72
LINC01880-201ENST00000446593 JPH4Q96JJ6 628 aa10.57□□□□□ -0.72
LINC01880-201ENST00000446593 WRNQ14191 1432 aaPredicted RBP eCLIP10.57□□□□□ -0.72
LINC01880-201ENST00000446593 ERCC6L2Q5T890 1561 aa10.56□□□□□ -0.72
LINC01880-201ENST00000446593 CEP170Q5SW79 1584 aa10.56□□□□□ -0.72
LINC01880-201ENST00000446593 ILDR1Q86SU0 546 aaPredicted RBP10.55□□□□□ -0.72
LINC01880-201ENST00000446593 FHAD1B1AJZ9 1412 aa10.55□□□□□ -0.72
LINC01880-201ENST00000446593 KDM4FA0A1W2PPD8 638 aa10.54□□□□□ -0.72
LINC01880-201ENST00000446593 PRG4Q92954 1404 aaPredicted RBP10.54□□□□□ -0.72
LINC01880-201ENST00000446593 SP7Q8TDD2 431 aaPredicted RBP10.53□□□□□ -0.72
LINC01880-201ENST00000446593 PBRM1Q86U86 1689 aa10.53□□□□□ -0.72
LINC01880-201ENST00000446593 ABCA5Q8WWZ7 1642 aa10.52□□□□□ -0.73
LINC01880-201ENST00000446593 U3KPZ7 1027 aaPredicted RBP10.52□□□□□ -0.73
LINC01880-201ENST00000446593 ABCC10Q5T3U5 1492 aa10.52□□□□□ -0.73
LINC01880-201ENST00000446593 ADAMTS12P58397 1594 aa10.48□□□□□ -0.73
LINC01880-201ENST00000446593 SHROOM2Q13796 1616 aa10.47□□□□□ -0.73
LINC01880-201ENST00000446593 ERICH3Q5RHP9 1530 aa10.45□□□□□ -0.74
LINC01880-201ENST00000446593 CHRDL2Q6WN34 429 aa10.45□□□□□ -0.74
LINC01880-201ENST00000446593 MAPKBP1O60336 1514 aa10.44□□□□□ -0.74
LINC01880-201ENST00000446593 KIF13AQ9H1H9 1805 aa10.42□□□□□ -0.74
LINC01880-201ENST00000446593 KDM6BO15054 1643 aa10.41□□□□□ -0.74
LINC01880-201ENST00000446593 SUPT5HO00267 1087 aaKnown RBP10.41□□□□□ -0.74
LINC01880-201ENST00000446593 DIP2BQ9P265 1576 aa10.39□□□□□ -0.75
LINC01880-201ENST00000446593 TOP2BQ02880 1626 aa10.38□□□□□ -0.75
LINC01880-201ENST00000446593 RBM42Q9BTD8 480 aaKnown RBP10.38□□□□□ -0.75
LINC01880-201ENST00000446593 PTPRGP23470 1445 aa10.37□□□□□ -0.75
LINC01880-201ENST00000446593 KIAA0586Q9BVV6 1533 aa10.37□□□□□ -0.75
LINC01880-201ENST00000446593 TTBK1Q5TCY1 1321 aaPredicted RBP10.36□□□□□ -0.75
LINC01880-201ENST00000446593 ADCY10Q96PN6 1610 aa10.34□□□□□ -0.75
LINC01880-201ENST00000446593 NCBP3Q53F19 620 aaKnown RBP10.34□□□□□ -0.75
LINC01880-201ENST00000446593 BIVM-ERCC5R4GMW8 1640 aa10.33□□□□□ -0.76
LINC01880-201ENST00000446593 RUSC2Q8N2Y8 1516 aa10.33□□□□□ -0.76
LINC01880-201ENST00000446593 ADGRL1O94910 1474 aa10.32□□□□□ -0.76
LINC01880-201ENST00000446593 PLB1Q6P1J6 1458 aa10.32□□□□□ -0.76
LINC01880-201ENST00000446593 IGF1RP08069 1367 aa10.32□□□□□ -0.76
LINC01880-201ENST00000446593 CARMIL2Q6F5E8 1435 aa10.32□□□□□ -0.76
LINC01880-201ENST00000446593 TNIKQ9UKE5 1360 aa10.31□□□□□ -0.76
LINC01880-201ENST00000446593 ABCB7O75027 752 aa10.31□□□□□ -0.76
LINC01880-201ENST00000446593 ASXL2Q76L83 1435 aa10.31□□□□□ -0.76
LINC01880-201ENST00000446593 ABCC2Q92887 1545 aa10.3□□□□□ -0.76
LINC01880-201ENST00000446593 KIF27Q86VH2 1401 aa10.28□□□□□ -0.76
LINC01880-201ENST00000446593 FBXO41Q8TF61 875 aa10.27□□□□□ -0.77
LINC01880-201ENST00000446593 ZNF219Q9P2Y4 722 aaPredicted RBP10.26□□□□□ -0.77
LINC01880-201ENST00000446593 GLI2P10070 1586 aa10.26□□□□□ -0.77
LINC01880-201ENST00000446593 CARMIL1Q5VZK9 1371 aa10.26□□□□□ -0.77
LINC01880-201ENST00000446593 TSPOAP1O95153 1857 aa10.25□□□□□ -0.77
LINC01880-201ENST00000446593 TEX14Q8IWB6 1497 aa10.25□□□□□ -0.77
LINC01880-201ENST00000446593 COL17A1Q9UMD9 1497 aaPredicted RBP10.25□□□□□ -0.77
LINC01880-201ENST00000446593 UACAQ9BZF9 1416 aa10.24□□□□□ -0.77
LINC01880-201ENST00000446593 UHRF1BP1LA0JNW5 1464 aa10.24□□□□□ -0.77
LINC01880-201ENST00000446593 HECW2Q9P2P5 1572 aa10.23□□□□□ -0.77
LINC01880-201ENST00000446593 APLP2Q06481 763 aa10.23□□□□□ -0.77
LINC01880-201ENST00000446593 EPRSP07814 1512 aaKnown RBP10.22□□□□□ -0.77
LINC01880-201ENST00000446593 CUL7Q14999 1698 aa10.18□□□□□ -0.78
LINC01880-201ENST00000446593 KDM5BQ9UGL1 1544 aa10.18□□□□□ -0.78
LINC01880-201ENST00000446593 KCNH8Q96L42 1107 aa10.18□□□□□ -0.78
LINC01880-201ENST00000446593 FAM9AQ8IZU1 332 aaPredicted RBP10.16□□□□□ -0.78
LINC01880-201ENST00000446593 CD109Q6YHK3 1445 aa10.16□□□□□ -0.78
LINC01880-201ENST00000446593 PPRC1Q5VV67 1664 aaKnown RBP10.15□□□□□ -0.78
LINC01880-201ENST00000446593 IQGAP2Q13576 1575 aa10.15□□□□□ -0.78
LINC01880-201ENST00000446593 DISP1Q96F81 1524 aa10.14□□□□□ -0.79
LINC01880-201ENST00000446593 WDR7Q9Y4E6 1490 aa10.14□□□□□ -0.79
LINC01880-201ENST00000446593 MAP3K4Q9Y6R4 1608 aa10.14□□□□□ -0.79
LINC01880-201ENST00000446593 NPM3O75607 178 aaKnown RBP10.13□□□□□ -0.79
LINC01880-201ENST00000446593 MAGI3Q5TCQ9 1506 aa10.12□□□□□ -0.79
LINC01880-201ENST00000446593 UGGT2Q9NYU1 1516 aa10.09□□□□□ -0.79
LINC01880-201ENST00000446593 RAPGEF2Q9Y4G8 1499 aa10.09□□□□□ -0.79
LINC01880-201ENST00000446593 PHLDB1Q86UU1 1377 aa10.08□□□□□ -0.8
LINC01880-201ENST00000446593 ARID4BQ4LE39 1312 aaPredicted RBP10.07□□□□□ -0.8
LINC01880-201ENST00000446593 ZCCHC11Q5TAX3 1644 aaKnown RBP10.07□□□□□ -0.8
LINC01880-201ENST00000446593 HAX1O00165 279 aa10.07□□□□□ -0.8
LINC01880-201ENST00000446593 PTPRMP28827 1452 aa10.06□□□□□ -0.8
LINC01880-201ENST00000446593 ARAP3Q8WWN8 1544 aa10.06□□□□□ -0.8
LINC01880-201ENST00000446593 RAPGEF3O95398 923 aa10.05□□□□□ -0.8
LINC01880-201ENST00000446593 GOLGA3Q08378 1498 aa10.04□□□□□ -0.8
LINC01880-201ENST00000446593 LMTK3Q96Q04 1460 aa10.04□□□□□ -0.8
LINC01880-201ENST00000446593 KIAA0556O60303 1618 aa10.04□□□□□ -0.8
LINC01880-201ENST00000446593 ARID3CA6NKF2 412 aa10.02□□□□□ -0.81
LINC01880-201ENST00000446593 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.01□□□□□ -0.81
LINC01880-201ENST00000446593 HNRNPUL2Q1KMD3 747 aaKnown RBP10.01□□□□□ -0.81
LINC01880-201ENST00000446593 CERKQ8TCT0 537 aa10.01□□□□□ -0.81
LINC01880-201ENST00000446593 CFAP43Q8NDM7 1665 aa10.01□□□□□ -0.81
LINC01880-201ENST00000446593 PIP4P2Q8N4L2 257 aa10□□□□□ -0.81
LINC01880-201ENST00000446593 HSPA2P54652 639 aa9.99□□□□□ -0.81
LINC01880-201ENST00000446593 KIF21BO75037 1637 aa9.99□□□□□ -0.81
LINC01880-201ENST00000446593 ABCA8O94911 1581 aa9.98□□□□□ -0.81
LINC01880-201ENST00000446593 PCF11O94913 1555 aaKnown RBP9.98□□□□□ -0.81
LINC01880-201ENST00000446593 SOCS7O14512 581 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms