RNA–Protein interactions for RNA: ENST00000446330.6

COA1-210, Transcript of cytochrome c oxidase assembly factor 1 homolog, humanhuman

TSL 2

Gene COA1, Length 1,520 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COA1-210ENST00000446330 CUL7Q14999 1698 aa12.63□□□□□ -0.39
COA1-210ENST00000446330 CARMIL1Q5VZK9 1371 aa12.61□□□□□ -0.39
COA1-210ENST00000446330 TDRD9Q8NDG6 1382 aaKnown RBP12.61□□□□□ -0.39
COA1-210ENST00000446330 CLIP1P30622 1438 aa12.6□□□□□ -0.39
COA1-210ENST00000446330 GAPVD1Q14C86 1478 aa12.6□□□□□ -0.39
COA1-210ENST00000446330 CTTNBP2Q8WZ74 1663 aa12.56□□□□□ -0.4
COA1-210ENST00000446330 ZNF608Q9ULD9 1512 aaPredicted RBP12.55□□□□□ -0.4
COA1-210ENST00000446330 AQRO60306 1485 aaKnown RBP eCLIP12.55□□□□□ -0.44e-6■□□□□ 10.5
COA1-210ENST00000446330 IFT140Q96RY7 1462 aa12.55□□□□□ -0.4
COA1-210ENST00000446330 ARAP1Q96P48 1450 aa12.54□□□□□ -0.4
COA1-210ENST00000446330 EIF4G3O43432 1585 aaKnown RBP12.53□□□□□ -0.4
COA1-210ENST00000446330 RANGAP1P46060 587 aaPredicted RBP12.52□□□□□ -0.4
COA1-210ENST00000446330 ADAMTS12P58397 1594 aa12.52□□□□□ -0.41
COA1-210ENST00000446330 ARHGAP35Q9NRY4 1499 aa12.51□□□□□ -0.41
COA1-210ENST00000446330 PPARGC1BQ86YN6 1023 aaKnown RBP12.51□□□□□ -0.41
COA1-210ENST00000446330 PCGF6Q9BYE7 350 aa12.51□□□□□ -0.41
COA1-210ENST00000446330 VPS8Q8N3P4 1428 aa12.49□□□□□ -0.41
COA1-210ENST00000446330 GRIN2BQ13224 1484 aa12.47□□□□□ -0.41
COA1-210ENST00000446330 FBLN2P98095 1184 aa12.46□□□□□ -0.42
COA1-210ENST00000446330 TRIM26Q12899 539 aaPredicted RBP12.46□□□□□ -0.42
COA1-210ENST00000446330 FHAD1B1AJZ9 1412 aa12.43□□□□□ -0.42
COA1-210ENST00000446330 SNAPC4Q5SXM2 1469 aa12.43□□□□□ -0.42
COA1-210ENST00000446330 SAMD9Q5K651 1589 aa12.4□□□□□ -0.42
COA1-210ENST00000446330 TTBK1Q5TCY1 1321 aaPredicted RBP12.38□□□□□ -0.43
COA1-210ENST00000446330 EFCAB5A4FU69 1503 aa12.38□□□□□ -0.43
COA1-210ENST00000446330 PCF11O94913 1555 aaKnown RBP12.37□□□□□ -0.43
COA1-210ENST00000446330 CHD1O14646 1710 aa12.36□□□□□ -0.43
COA1-210ENST00000446330 MAGI1Q96QZ7 1491 aaPredicted RBP12.36□□□□□ -0.43
COA1-210ENST00000446330 FHOD3Q2V2M9 1422 aa12.36□□□□□ -0.43
COA1-210ENST00000446330 IQGAP2Q13576 1575 aa12.35□□□□□ -0.43
COA1-210ENST00000446330 GRIN2AQ12879 1464 aa12.35□□□□□ -0.43
COA1-210ENST00000446330 LRRIQ1Q96JM4 1722 aa12.34□□□□□ -0.43
COA1-210ENST00000446330 P3H3Q8IVL6 736 aa12.33□□□□□ -0.44
COA1-210ENST00000446330 CEP170Q5SW79 1584 aa12.33□□□□□ -0.44
COA1-210ENST00000446330 CFAP43Q8NDM7 1665 aa12.32□□□□□ -0.44
COA1-210ENST00000446330 SYNJ2O15056 1496 aa12.31□□□□□ -0.44
COA1-210ENST00000446330 TIAM1Q13009 1591 aa12.3□□□□□ -0.44
COA1-210ENST00000446330 CHMP7Q8WUX9 453 aaPredicted RBP12.29□□□□□ -0.44
COA1-210ENST00000446330 UGGT2Q9NYU1 1516 aa12.29□□□□□ -0.44
COA1-210ENST00000446330 KANK4Q5T7N3 995 aaPredicted RBP12.28□□□□□ -0.44
COA1-210ENST00000446330 CLASP1Q7Z460 1538 aa12.27□□□□□ -0.44
COA1-210ENST00000446330 KIAA0586Q9BVV6 1533 aa12.27□□□□□ -0.44
COA1-210ENST00000446330 CACNB1Q02641 598 aaPredicted RBP12.27□□□□□ -0.44
COA1-210ENST00000446330 MAP3K1Q13233 1512 aa12.26□□□□□ -0.45
COA1-210ENST00000446330 FYCO1Q9BQS8 1478 aa12.26□□□□□ -0.45
COA1-210ENST00000446330 KIAA0556O60303 1618 aa12.25□□□□□ -0.45
COA1-210ENST00000446330 NUP160Q12769 1436 aa12.25□□□□□ -0.45
COA1-210ENST00000446330 ILDR1Q86SU0 546 aaPredicted RBP12.25□□□□□ -0.45
COA1-210ENST00000446330 DISP1Q96F81 1524 aa12.25□□□□□ -0.45
COA1-210ENST00000446330 CASKIN1Q8WXD9 1431 aa12.25□□□□□ -0.45
COA1-210ENST00000446330 APLP2Q06481 763 aa12.24□□□□□ -0.45
COA1-210ENST00000446330 FMN1Q68DA7 1419 aa12.22□□□□□ -0.45
COA1-210ENST00000446330 LRRC9Q6ZRR7 1453 aa12.21□□□□□ -0.46
COA1-210ENST00000446330 HRCP23327 699 aa12.19□□□□□ -0.46
COA1-210ENST00000446330 HECW1Q76N89 1606 aa12.17□□□□□ -0.46
COA1-210ENST00000446330 MAGI3Q5TCQ9 1506 aa12.15□□□□□ -0.46
COA1-210ENST00000446330 ATP1B4Q9UN42 357 aaPredicted RBP12.15□□□□□ -0.46
COA1-210ENST00000446330 RAPGEF6Q8TEU7 1601 aa12.14□□□□□ -0.47
COA1-210ENST00000446330 RRBP1Q9P2E9 1410 aaKnown RBP12.14□□□□□ -0.47
COA1-210ENST00000446330 SHROOM2Q13796 1616 aa12.14□□□□□ -0.47
COA1-210ENST00000446330 CDK13Q14004 1512 aaKnown RBP12.13□□□□□ -0.47
COA1-210ENST00000446330 PHLDB1Q86UU1 1377 aa12.11□□□□□ -0.47
COA1-210ENST00000446330 EPRSP07814 1512 aaKnown RBP12.11□□□□□ -0.47
COA1-210ENST00000446330 KDM4FA0A1W2PPD8 638 aa12.11□□□□□ -0.47
COA1-210ENST00000446330 JPH4Q96JJ6 628 aa12.11□□□□□ -0.47
COA1-210ENST00000446330 DMRT2Q9Y5R5 561 aa12.11□□□□□ -0.47
COA1-210ENST00000446330 CCDC18Q5T9S5 1454 aa12.1□□□□□ -0.47
COA1-210ENST00000446330 SUPT6HQ7KZ85 1726 aaKnown RBP12.09□□□□□ -0.47
COA1-210ENST00000446330 EHBP1L1Q8N3D4 1523 aa12.09□□□□□ -0.47
COA1-210ENST00000446330 NUP153P49790 1475 aaKnown RBP12.09□□□□□ -0.47
COA1-210ENST00000446330 ERCC6L2Q5T890 1561 aa12.09□□□□□ -0.47
COA1-210ENST00000446330 PLB1Q6P1J6 1458 aa12.08□□□□□ -0.48
COA1-210ENST00000446330 HNRNPUL2Q1KMD3 747 aaKnown RBP12.07□□□□□ -0.48
COA1-210ENST00000446330 ABCA8O94911 1581 aa12.07□□□□□ -0.48
COA1-210ENST00000446330 CCNB3Q8WWL7 1395 aa12.06□□□□□ -0.48
COA1-210ENST00000446330 SCAF1Q9H7N4 1312 aaKnown RBP12.06□□□□□ -0.48
COA1-210ENST00000446330 CARMIL2Q6F5E8 1435 aa12.06□□□□□ -0.48
COA1-210ENST00000446330 PRG4Q92954 1404 aaPredicted RBP12.06□□□□□ -0.48
COA1-210ENST00000446330 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.05□□□□□ -0.48
COA1-210ENST00000446330 MTUS2Q5JR59 1369 aa12.05□□□□□ -0.48
COA1-210ENST00000446330 NCOA2Q15596 1464 aa12.05□□□□□ -0.48
COA1-210ENST00000446330 ARID3CA6NKF2 412 aa12.04□□□□□ -0.48
COA1-210ENST00000446330 FAM69CQ0P6D2 419 aa12.04□□□□□ -0.48
COA1-210ENST00000446330 FGD6Q6ZV73 1430 aa12□□□□□ -0.49
COA1-210ENST00000446330 MAPK8IP2Q13387 824 aaPredicted RBP12□□□□□ -0.49
COA1-210ENST00000446330 ADCY10Q96PN6 1610 aa11.99□□□□□ -0.49
COA1-210ENST00000446330 KIF14Q15058 1648 aa11.98□□□□□ -0.49
COA1-210ENST00000446330 PTPN23Q9H3S7 1636 aa11.98□□□□□ -0.49
COA1-210ENST00000446330 MYOM3Q5VTT5 1437 aa11.98□□□□□ -0.49
COA1-210ENST00000446330 KIF13AQ9H1H9 1805 aa11.98□□□□□ -0.49
COA1-210ENST00000446330 NPM1P06748 294 aaKnown RBP eCLIP11.97□□□□□ -0.49
COA1-210ENST00000446330 PTPRGP23470 1445 aa11.96□□□□□ -0.49
COA1-210ENST00000446330 ATP10BO94823 1461 aa11.96□□□□□ -0.49
COA1-210ENST00000446330 ABCC10Q5T3U5 1492 aa11.96□□□□□ -0.49
COA1-210ENST00000446330 ITGAEP38570 1179 aa11.95□□□□□ -0.5
COA1-210ENST00000446330 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.95□□□□□ -0.55e-10■■■■■ 46.6
COA1-210ENST00000446330 TROQ12816 1431 aaPredicted RBP11.94□□□□□ -0.5
COA1-210ENST00000446330 CCER1Q8TC90 406 aaPredicted RBP11.94□□□□□ -0.5
COA1-210ENST00000446330 TCOF1Q13428 1488 aaKnown RBP11.93□□□□□ -0.5
COA1-210ENST00000446330 FAM50AQ14320 339 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms