RNA–Protein interactions for RNA: ENST00000444739.6

CASP4-203, Transcript of caspase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP4, Length 2,158 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-203ENST00000444739 BICRAQ9NZM4 1560 aa14.19□□□□□ -0.14
CASP4-203ENST00000444739 FANCIQ9NVI1 1328 aa14.16□□□□□ -0.14
CASP4-203ENST00000444739 ARHGAP35Q9NRY4 1499 aa14.16□□□□□ -0.14
CASP4-203ENST00000444739 ATAD2BQ9ULI0 1458 aa14.16□□□□□ -0.14
CASP4-203ENST00000444739 TRIM52Q96A61 297 aa14.16□□□□□ -0.14
CASP4-203ENST00000444739 SETD5Q9C0A6 1442 aa14.15□□□□□ -0.14
CASP4-203ENST00000444739 TIAM1Q13009 1591 aa14.11□□□□□ -0.15
CASP4-203ENST00000444739 MAP3K1Q13233 1512 aa14.11□□□□□ -0.15
CASP4-203ENST00000444739 SIN3AQ96ST3 1273 aa14.11□□□□□ -0.15
CASP4-203ENST00000444739 ANP32CO43423 234 aa14.1□□□□□ -0.15
CASP4-203ENST00000444739 TIMELESSQ9UNS1 1208 aa14.1□□□□□ -0.15
CASP4-203ENST00000444739 PABPN1Q86U42 306 aaKnown RBP eCLIP14.07□□□□□ -0.16
CASP4-203ENST00000444739 KIF27Q86VH2 1401 aa14.06□□□□□ -0.16
CASP4-203ENST00000444739 CUX1P39880 1505 aa14.05□□□□□ -0.16
CASP4-203ENST00000444739 HIRIP3Q9BW71 556 aaPredicted RBP14.05□□□□□ -0.16
CASP4-203ENST00000444739 LRRC9Q6ZRR7 1453 aa14.04□□□□□ -0.16
CASP4-203ENST00000444739 CDK11AQ9UQ88 783 aaPredicted RBP14.04□□□□□ -0.16
CASP4-203ENST00000444739 PHLDB1Q86UU1 1377 aa14.03□□□□□ -0.16
CASP4-203ENST00000444739 ERICH6Q7L0X2 663 aa14.02□□□□□ -0.16
CASP4-203ENST00000444739 MYT1LQ9UL68 1186 aa14□□□□□ -0.17
CASP4-203ENST00000444739 CFAP43Q8NDM7 1665 aa14□□□□□ -0.17
CASP4-203ENST00000444739 IRX6P78412 446 aaPredicted RBP13.96□□□□□ -0.17
CASP4-203ENST00000444739 ERICH6BQ5W0A0 696 aa13.96□□□□□ -0.17
CASP4-203ENST00000444739 HNRNPUQ00839 825 aaKnown RBP eCLIP13.95□□□□□ -0.18
CASP4-203ENST00000444739 FAM50AQ14320 339 aaKnown RBP13.95□□□□□ -0.18
CASP4-203ENST00000444739 DEKP35659 375 aaKnown RBP13.92□□□□□ -0.18
CASP4-203ENST00000444739 PPP4R2Q9NY27 417 aa13.92□□□□□ -0.18
CASP4-203ENST00000444739 TONSLQ96HA7 1378 aa13.92□□□□□ -0.18
CASP4-203ENST00000444739 PCF11O94913 1555 aaKnown RBP13.91□□□□□ -0.18
CASP4-203ENST00000444739 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.91□□□□□ -0.18
CASP4-203ENST00000444739 FHAD1B1AJZ9 1412 aa13.89□□□□□ -0.19
CASP4-203ENST00000444739 KDM5BQ9UGL1 1544 aa13.88□□□□□ -0.19
CASP4-203ENST00000444739 IGF1RP08069 1367 aa13.88□□□□□ -0.19
CASP4-203ENST00000444739 CCDC18Q5T9S5 1454 aa13.86□□□□□ -0.19
CASP4-203ENST00000444739 PRKCSHP14314 528 aaPredicted RBP13.85□□□□□ -0.19
CASP4-203ENST00000444739 UACAQ9BZF9 1416 aa13.85□□□□□ -0.19
CASP4-203ENST00000444739 HMGXB3Q12766 1538 aa13.84□□□□□ -0.19
CASP4-203ENST00000444739 PTPN23Q9H3S7 1636 aa13.83□□□□□ -0.2
CASP4-203ENST00000444739 CFTRP13569 1480 aa13.82□□□□□ -0.2
CASP4-203ENST00000444739 NCOA2Q15596 1464 aa13.82□□□□□ -0.2
CASP4-203ENST00000444739 NOP58Q9Y2X3 529 aaKnown RBP13.82□□□□□ -0.2
CASP4-203ENST00000444739 WASHC2AQ641Q2 1341 aa13.82□□□□□ -0.2
CASP4-203ENST00000444739 FYCO1Q9BQS8 1478 aa13.82□□□□□ -0.2
CASP4-203ENST00000444739 HFM1A2PYH4 1435 aa13.82□□□□□ -0.2
CASP4-203ENST00000444739 CARMIL1Q5VZK9 1371 aa13.81□□□□□ -0.2
CASP4-203ENST00000444739 B4GALNT3Q6L9W6 998 aa13.81□□□□□ -0.2
CASP4-203ENST00000444739 POTEDQ86YR6 584 aa13.81□□□□□ -0.2
CASP4-203ENST00000444739 PRDM2Q13029 1718 aa13.8□□□□□ -0.2
CASP4-203ENST00000444739 FGD6Q6ZV73 1430 aa13.8□□□□□ -0.2
CASP4-203ENST00000444739 CNTLNQ9NXG0 1405 aa13.78□□□□□ -0.2
CASP4-203ENST00000444739 CCDC184Q52MB2 194 aa13.78□□□□□ -0.2
CASP4-203ENST00000444739 PTPRKQ15262 1439 aa13.78□□□□□ -0.2
CASP4-203ENST00000444739 PAK3O75914 559 aaPredicted RBP13.78□□□□□ -0.2
CASP4-203ENST00000444739 CASKIN1Q8WXD9 1431 aa13.77□□□□□ -0.2
CASP4-203ENST00000444739 NCAPD3P42695 1498 aa13.77□□□□□ -0.2
CASP4-203ENST00000444739 FGD5Q6ZNL6 1462 aa13.77□□□□□ -0.2
CASP4-203ENST00000444739 ZBED9Q6R2W3 1325 aa13.77□□□□□ -0.21
CASP4-203ENST00000444739 AQRO60306 1485 aaKnown RBP eCLIP13.77□□□□□ -0.21
CASP4-203ENST00000444739 HSPA5P11021 654 aaKnown RBP13.76□□□□□ -0.21
CASP4-203ENST00000444739 NAIPQ13075 1403 aa13.75□□□□□ -0.21
CASP4-203ENST00000444739 NBR1Q14596 966 aa13.75□□□□□ -0.21
CASP4-203ENST00000444739 FHOD3Q2V2M9 1422 aa13.75□□□□□ -0.21
CASP4-203ENST00000444739 EFCAB5A4FU69 1503 aa13.74□□□□□ -0.21
CASP4-203ENST00000444739 P3H3Q8IVL6 736 aa13.73□□□□□ -0.21
CASP4-203ENST00000444739 ATP1B4Q9UN42 357 aaPredicted RBP13.73□□□□□ -0.21
CASP4-203ENST00000444739 PRKRIP1Q9H875 184 aaPredicted RBP13.72□□□□□ -0.21
CASP4-203ENST00000444739 PLPPR3Q6T4P5 718 aa13.72□□□□□ -0.21
CASP4-203ENST00000444739 NCOA1Q15788 1441 aa13.7□□□□□ -0.22
CASP4-203ENST00000444739 FAM9BQ8IZU0 186 aa13.7□□□□□ -0.22
CASP4-203ENST00000444739 FMN1Q68DA7 1419 aa13.69□□□□□ -0.22
CASP4-203ENST00000444739 EIF4G2P78344 907 aaKnown RBP eCLIP13.69□□□□□ -0.22
CASP4-203ENST00000444739 HECW1Q76N89 1606 aa13.69□□□□□ -0.22
CASP4-203ENST00000444739 DENND4BO75064 1496 aaPredicted RBP13.69□□□□□ -0.22
CASP4-203ENST00000444739 IPO9Q96P70 1041 aaKnown RBP13.68□□□□□ -0.22
CASP4-203ENST00000444739 MRS2Q9HD23 443 aa13.68□□□□□ -0.22
CASP4-203ENST00000444739 CCDC7Q96M83 1385 aa13.68□□□□□ -0.22
CASP4-203ENST00000444739 SNAPC4Q5SXM2 1469 aa13.68□□□□□ -0.22
CASP4-203ENST00000444739 POLR1AO95602 1720 aaPredicted RBP13.67□□□□□ -0.22
CASP4-203ENST00000444739 SMG6Q86US8 1419 aaKnown RBP13.67□□□□□ -0.22
CASP4-203ENST00000444739 LRRIQ1Q96JM4 1722 aa13.67□□□□□ -0.22
CASP4-203ENST00000444739 C11orf95C9JLR9 678 aaPredicted RBP13.66□□□□□ -0.22
CASP4-203ENST00000444739 GCC2Q8IWJ2 1684 aa13.66□□□□□ -0.22
CASP4-203ENST00000444739 CTTNBP2Q8WZ74 1663 aa13.66□□□□□ -0.22
CASP4-203ENST00000444739 ABCA5Q8WWZ7 1642 aa13.66□□□□□ -0.22
CASP4-203ENST00000444739 ANO8Q9HCE9 1232 aaPredicted RBP13.66□□□□□ -0.22
CASP4-203ENST00000444739 ANP32AP39687 249 aaKnown RBP13.65□□□□□ -0.22
CASP4-203ENST00000444739 MYOM3Q5VTT5 1437 aa13.65□□□□□ -0.22
CASP4-203ENST00000444739 AKNAQ7Z591 1439 aa13.65□□□□□ -0.22
CASP4-203ENST00000444739 RNF123Q5XPI4 1314 aa13.65□□□□□ -0.23
CASP4-203ENST00000444739 MTUS2Q5JR59 1369 aa13.64□□□□□ -0.23
CASP4-203ENST00000444739 RTL5Q5HYW3 569 aaPredicted RBP13.63□□□□□ -0.23
CASP4-203ENST00000444739 SUPT6HQ7KZ85 1726 aaKnown RBP13.62□□□□□ -0.23
CASP4-203ENST00000444739 ZBTB47Q9UFB7 747 aaPredicted RBP13.61□□□□□ -0.23
CASP4-203ENST00000444739 CCDC136Q96JN2 1154 aa13.6□□□□□ -0.23
CASP4-203ENST00000444739 KDM6BO15054 1643 aa13.6□□□□□ -0.23
CASP4-203ENST00000444739 NUDCQ9Y266 331 aa13.59□□□□□ -0.23
CASP4-203ENST00000444739 CC2D2AQ9P2K1 1620 aa13.59□□□□□ -0.23
CASP4-203ENST00000444739 SALL2Q9Y467 1007 aaPredicted RBP13.59□□□□□ -0.23
CASP4-203ENST00000444739 CUL7Q14999 1698 aa13.58□□□□□ -0.24
CASP4-203ENST00000444739 L3MBTL2Q969R5 705 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms