RNA–Protein interactions for RNA: ENST00000443785.5

PAXBP1-204, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-204ENST00000443785 CFTRP13569 1480 aa27.22■■□□□ 1.95
PAXBP1-204ENST00000443785 TRIM52Q96A61 297 aa27.19■■□□□ 1.94
PAXBP1-204ENST00000443785 FHOD3Q2V2M9 1422 aa27.15■■□□□ 1.94
PAXBP1-204ENST00000443785 FGD5Q6ZNL6 1462 aa27.12■■□□□ 1.93
PAXBP1-204ENST00000443785 RAD54L2Q9Y4B4 1467 aa27.1■■□□□ 1.93
PAXBP1-204ENST00000443785 SETD5Q9C0A6 1442 aa27.08■■□□□ 1.93
PAXBP1-204ENST00000443785 CADPSQ9ULU8 1353 aa27.08■■□□□ 1.93
PAXBP1-204ENST00000443785 FKBP8Q14318 412 aa27.07■■□□□ 1.92
PAXBP1-204ENST00000443785 CHIC2Q9UKJ5 165 aa27.04■■□□□ 1.92
PAXBP1-204ENST00000443785 HMGXB3Q12766 1538 aa27.04■■□□□ 1.92
PAXBP1-204ENST00000443785 MAPKBP1O60336 1514 aa27.02■■□□□ 1.92
PAXBP1-204ENST00000443785 WDR97A6NE52 1622 aa27■■□□□ 1.91
PAXBP1-204ENST00000443785 LRRC9Q6ZRR7 1453 aa27■■□□□ 1.91
PAXBP1-204ENST00000443785 DNAJC5BQ9UF47 199 aa26.99■■□□□ 1.91
PAXBP1-204ENST00000443785 CNGB1Q14028 1251 aaPredicted RBP26.99■■□□□ 1.91
PAXBP1-204ENST00000443785 NESP48681 1621 aa26.95■■□□□ 1.91
PAXBP1-204ENST00000443785 TSHZ2Q9NRE2 1034 aa26.95■■□□□ 1.9
PAXBP1-204ENST00000443785 TIAM1Q13009 1591 aa26.95■■□□□ 1.9
PAXBP1-204ENST00000443785 RRP7BPQ9NSQ0 103 aa26.93■■□□□ 1.9
PAXBP1-204ENST00000443785 TDRD9Q8NDG6 1382 aaKnown RBP26.92■■□□□ 1.9
PAXBP1-204ENST00000443785 IRX6P78412 446 aaPredicted RBP26.89■■□□□ 1.89
PAXBP1-204ENST00000443785 PPP1R15AO75807 674 aaPredicted RBP26.87■■□□□ 1.89
PAXBP1-204ENST00000443785 FANCD2Q9BXW9 1451 aa26.87■■□□□ 1.89
PAXBP1-204ENST00000443785 ANP32CO43423 234 aa26.85■■□□□ 1.89
PAXBP1-204ENST00000443785 MTUS2Q5JR59 1369 aa26.84■■□□□ 1.89
PAXBP1-204ENST00000443785 PCF11O94913 1555 aaKnown RBP26.84■■□□□ 1.89
PAXBP1-204ENST00000443785 FOXD1Q16676 465 aa26.84■■□□□ 1.89
PAXBP1-204ENST00000443785 TONSLQ96HA7 1378 aa26.82■■□□□ 1.88
PAXBP1-204ENST00000443785 FHAD1B1AJZ9 1412 aa26.81■■□□□ 1.88
PAXBP1-204ENST00000443785 SENP3-EIF4A1A0A087X0R7 540 aa26.78■■□□□ 1.88
PAXBP1-204ENST00000443785 PTPRKQ15262 1439 aa26.72■■□□□ 1.87
PAXBP1-204ENST00000443785 NEFLP07196 543 aa26.72■■□□□ 1.87
PAXBP1-204ENST00000443785 POLA1P09884 1462 aaPredicted RBP26.7■■□□□ 1.87
PAXBP1-204ENST00000443785 CC2D2AQ9P2K1 1620 aa26.68■■□□□ 1.86
PAXBP1-204ENST00000443785 HNRNPUQ00839 825 aaKnown RBP eCLIP26.67■■□□□ 1.86
PAXBP1-204ENST00000443785 MYT1Q01538 1121 aa26.64■■□□□ 1.85
PAXBP1-204ENST00000443785 FGD6Q6ZV73 1430 aa26.63■■□□□ 1.85
PAXBP1-204ENST00000443785 POLR3GLQ9BT43 218 aa26.62■■□□□ 1.85
PAXBP1-204ENST00000443785 TOPBP1Q92547 1522 aa26.62■■□□□ 1.85
PAXBP1-204ENST00000443785 AQRO60306 1485 aaKnown RBP eCLIP26.6■■□□□ 1.855e-12■■■■■ 58.3
PAXBP1-204ENST00000443785 CCDC18Q5T9S5 1454 aa26.6■■□□□ 1.85
PAXBP1-204ENST00000443785 CASKIN1Q8WXD9 1431 aa26.57■■□□□ 1.84
PAXBP1-204ENST00000443785 CCDC184Q52MB2 194 aa26.56■■□□□ 1.84
PAXBP1-204ENST00000443785 HSPA5P11021 654 aaKnown RBP26.55■■□□□ 1.84
PAXBP1-204ENST00000443785 FAM9BQ8IZU0 186 aa26.52■■□□□ 1.84
PAXBP1-204ENST00000443785 MAP3K1Q13233 1512 aa26.51■■□□□ 1.83
PAXBP1-204ENST00000443785 ZNF326Q5BKZ1 582 aaKnown RBP26.51■■□□□ 1.83
PAXBP1-204ENST00000443785 FYCO1Q9BQS8 1478 aa26.5■■□□□ 1.83
PAXBP1-204ENST00000443785 FMN1Q68DA7 1419 aa26.48■■□□□ 1.83
PAXBP1-204ENST00000443785 ABCA10Q8WWZ4 1543 aa26.48■■□□□ 1.83
PAXBP1-204ENST00000443785 NCOA2Q15596 1464 aa26.47■■□□□ 1.83
PAXBP1-204ENST00000443785 ZNF644Q9H582 1327 aaPredicted RBP26.45■■□□□ 1.82
PAXBP1-204ENST00000443785 WASHC2AQ641Q2 1341 aa26.45■■□□□ 1.82
PAXBP1-204ENST00000443785 RBM19Q9Y4C8 960 aaKnown RBP26.45■■□□□ 1.82
PAXBP1-204ENST00000443785 C11orf95C9JLR9 678 aaPredicted RBP26.44■■□□□ 1.82
PAXBP1-204ENST00000443785 NAIPQ13075 1403 aa26.44■■□□□ 1.82
PAXBP1-204ENST00000443785 L3MBTL2Q969R5 705 aa26.43■■□□□ 1.82
PAXBP1-204ENST00000443785 TIMELESSQ9UNS1 1208 aa26.43■■□□□ 1.82
PAXBP1-204ENST00000443785 URB2Q14146 1524 aaKnown RBP26.43■■□□□ 1.82
PAXBP1-204ENST00000443785 CCER2I3L3R5 266 aa26.43■■□□□ 1.82
PAXBP1-204ENST00000443785 DNMBPQ6XZF7 1577 aa26.42■■□□□ 1.82
PAXBP1-204ENST00000443785 CFAP43Q8NDM7 1665 aa26.42■■□□□ 1.82
PAXBP1-204ENST00000443785 ZNF777Q9ULD5 760 aaPredicted RBP26.4■■□□□ 1.82
PAXBP1-204ENST00000443785 UACAQ9BZF9 1416 aa26.39■■□□□ 1.82
PAXBP1-204ENST00000443785 MPHOSPH9Q99550 1183 aa26.38■■□□□ 1.81
PAXBP1-204ENST00000443785 GAPVD1Q14C86 1478 aa26.38■■□□□ 1.81
PAXBP1-204ENST00000443785 SNAPC4Q5SXM2 1469 aa26.38■■□□□ 1.81
PAXBP1-204ENST00000443785 MYOM3Q5VTT5 1437 aa26.38■■□□□ 1.81
PAXBP1-204ENST00000443785 HFM1A2PYH4 1435 aa26.37■■□□□ 1.81
PAXBP1-204ENST00000443785 ANP32EQ9BTT0 268 aa26.37■■□□□ 1.81
PAXBP1-204ENST00000443785 PRDM2Q13029 1718 aa26.36■■□□□ 1.81
PAXBP1-204ENST00000443785 EIF4G2P78344 907 aaKnown RBP eCLIP26.34■■□□□ 1.81
PAXBP1-204ENST00000443785 FBLN2P98095 1184 aa26.33■■□□□ 1.81
PAXBP1-204ENST00000443785 NBPF8Q3BBV2 869 aa26.3■■□□□ 1.8
PAXBP1-204ENST00000443785 PTPN23Q9H3S7 1636 aa26.3■■□□□ 1.8
PAXBP1-204ENST00000443785 MRS2Q9HD23 443 aa26.29■■□□□ 1.8
PAXBP1-204ENST00000443785 EFCAB5A4FU69 1503 aa26.29■■□□□ 1.8
PAXBP1-204ENST00000443785 MAGI3Q5TCQ9 1506 aa26.28■■□□□ 1.8
PAXBP1-204ENST00000443785 SLC4A1APQ9BWU0 796 aaKnown RBP26.28■■□□□ 1.8
PAXBP1-204ENST00000443785 CDK13Q14004 1512 aaKnown RBP26.28■■□□□ 1.8
PAXBP1-204ENST00000443785 PDS5BQ9NTI5 1447 aa26.23■■□□□ 1.79
PAXBP1-204ENST00000443785 B4GALNT3Q6L9W6 998 aa26.23■■□□□ 1.79
PAXBP1-204ENST00000443785 KDM6BO15054 1643 aa26.22■■□□□ 1.79
PAXBP1-204ENST00000443785 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.21■■□□□ 1.79
PAXBP1-204ENST00000443785 GRIN2BQ13224 1484 aa26.21■■□□□ 1.79
PAXBP1-204ENST00000443785 LRRIQ1Q96JM4 1722 aa26.2■■□□□ 1.78
PAXBP1-204ENST00000443785 CTTNBP2Q8WZ74 1663 aa26.19■■□□□ 1.78
PAXBP1-204ENST00000443785 DENND4BO75064 1496 aaPredicted RBP26.15■■□□□ 1.78
PAXBP1-204ENST00000443785 CUL7Q14999 1698 aa26.15■■□□□ 1.78
PAXBP1-204ENST00000443785 MSH5O43196 834 aa26.15■■□□□ 1.78
PAXBP1-204ENST00000443785 PRKRIP1Q9H875 184 aaPredicted RBP26.13■■□□□ 1.77
PAXBP1-204ENST00000443785 KDM2AQ9Y2K7 1162 aa26.13■■□□□ 1.77
PAXBP1-204ENST00000443785 CDK11AQ9UQ88 783 aaPredicted RBP26.11■■□□□ 1.77
PAXBP1-204ENST00000443785 SALL2Q9Y467 1007 aaPredicted RBP26.11■■□□□ 1.77
PAXBP1-204ENST00000443785 KDM5BQ9UGL1 1544 aa26.1■■□□□ 1.77
PAXBP1-204ENST00000443785 SUPT6HQ7KZ85 1726 aaKnown RBP26.08■■□□□ 1.77
PAXBP1-204ENST00000443785 KIF7Q2M1P5 1343 aa26.06■■□□□ 1.76
PAXBP1-204ENST00000443785 EPRSP07814 1512 aaKnown RBP26.06■■□□□ 1.76
PAXBP1-204ENST00000443785 UGGT2Q9NYU1 1516 aa26.05■■□□□ 1.76
PAXBP1-204ENST00000443785 EHBP1L1Q8N3D4 1523 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms