RNA–Protein interactions for RNA: ENST00000443047.6

CHFR-204, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 2,990 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-204ENST00000443047 PRKCSHP14314 528 aaPredicted RBP21.97■■□□□ 1.11
CHFR-204ENST00000443047 CLSPNQ9HAW4 1339 aa21.91■■□□□ 1.1
CHFR-204ENST00000443047 ITGAEP38570 1179 aa21.91■■□□□ 1.1
CHFR-204ENST00000443047 ATP1B4Q9UN42 357 aaPredicted RBP21.89■■□□□ 1.09
CHFR-204ENST00000443047 POLA1P09884 1462 aaPredicted RBP21.88■■□□□ 1.09
CHFR-204ENST00000443047 TOPBP1Q92547 1522 aa21.88■■□□□ 1.09
CHFR-204ENST00000443047 DNMBPQ6XZF7 1577 aa21.83■■□□□ 1.09
CHFR-204ENST00000443047 TDRD9Q8NDG6 1382 aaKnown RBP21.8■■□□□ 1.08
CHFR-204ENST00000443047 URB2Q14146 1524 aaKnown RBP21.78■■□□□ 1.08
CHFR-204ENST00000443047 RBM19Q9Y4C8 960 aaKnown RBP21.77■■□□□ 1.08
CHFR-204ENST00000443047 FKBP8Q14318 412 aa21.76■■□□□ 1.07
CHFR-204ENST00000443047 ABCA10Q8WWZ4 1543 aa21.75■■□□□ 1.07
CHFR-204ENST00000443047 FHOD3Q2V2M9 1422 aa21.73■■□□□ 1.07
CHFR-204ENST00000443047 CCNB3Q8WWL7 1395 aa21.69■■□□□ 1.06
CHFR-204ENST00000443047 KCNH8Q96L42 1107 aa21.68■■□□□ 1.06
CHFR-204ENST00000443047 LAMC3Q9Y6N6 1575 aa21.68■■□□□ 1.06
CHFR-204ENST00000443047 RRBP1Q9P2E9 1410 aaKnown RBP21.68■■□□□ 1.06
CHFR-204ENST00000443047 DHX57Q6P158 1386 aaKnown RBP21.66■■□□□ 1.06
CHFR-204ENST00000443047 TIAM1Q13009 1591 aa21.63■■□□□ 1.05
CHFR-204ENST00000443047 PDS5BQ9NTI5 1447 aa21.63■■□□□ 1.05
CHFR-204ENST00000443047 FAM50AQ14320 339 aaKnown RBP21.63■■□□□ 1.05
CHFR-204ENST00000443047 KIF21AQ7Z4S6 1674 aa21.61■■□□□ 1.05
CHFR-204ENST00000443047 PHLDB1Q86UU1 1377 aa21.61■■□□□ 1.05
CHFR-204ENST00000443047 PCF11O94913 1555 aaKnown RBP21.6■■□□□ 1.05
CHFR-204ENST00000443047 LRRC9Q6ZRR7 1453 aa21.59■■□□□ 1.05
CHFR-204ENST00000443047 ERICH6Q7L0X2 663 aa21.58■■□□□ 1.05
CHFR-204ENST00000443047 MSH5O43196 834 aa21.58■■□□□ 1.04
CHFR-204ENST00000443047 GAPVD1Q14C86 1478 aa21.57■■□□□ 1.04
CHFR-204ENST00000443047 FHAD1B1AJZ9 1412 aa21.56■■□□□ 1.04
CHFR-204ENST00000443047 NEFLP07196 543 aa21.53■■□□□ 1.04
CHFR-204ENST00000443047 WDR97A6NE52 1622 aa21.52■■□□□ 1.04
CHFR-204ENST00000443047 CUL7Q14999 1698 aa21.52■■□□□ 1.04
CHFR-204ENST00000443047 RAB3GAP2Q9H2M9 1393 aa21.5■■□□□ 1.03
CHFR-204ENST00000443047 ABCA5Q8WWZ7 1642 aa21.49■■□□□ 1.03
CHFR-204ENST00000443047 AQRO60306 1485 aaKnown RBP eCLIP21.49■■□□□ 1.031e-7■■■■■ 49.5
CHFR-204ENST00000443047 CTTNBP2Q8WZ74 1663 aa21.47■■□□□ 1.03
CHFR-204ENST00000443047 ARID3CA6NKF2 412 aa21.45■■□□□ 1.03
CHFR-204ENST00000443047 MAP3K1Q13233 1512 aa21.45■■□□□ 1.02
CHFR-204ENST00000443047 CASKIN1Q8WXD9 1431 aa21.43■■□□□ 1.02
CHFR-204ENST00000443047 EFCAB5A4FU69 1503 aa21.41■■□□□ 1.02
CHFR-204ENST00000443047 CFAP43Q8NDM7 1665 aa21.41■■□□□ 1.02
CHFR-204ENST00000443047 FYCO1Q9BQS8 1478 aa21.41■■□□□ 1.02
CHFR-204ENST00000443047 TARBP1Q13395 1621 aaKnown RBP21.4■■□□□ 1.02
CHFR-204ENST00000443047 ANO8Q9HCE9 1232 aaPredicted RBP21.39■■□□□ 1.01
CHFR-204ENST00000443047 FMN1Q68DA7 1419 aa21.37■■□□□ 1.01
CHFR-204ENST00000443047 TRIM52Q96A61 297 aa21.37■■□□□ 1.01
CHFR-204ENST00000443047 SIN3AQ96ST3 1273 aa21.37■■□□□ 1.01
CHFR-204ENST00000443047 MTUS2Q5JR59 1369 aa21.36■■□□□ 1.01
CHFR-204ENST00000443047 SETD5Q9C0A6 1442 aa21.36■■□□□ 1.01
CHFR-204ENST00000443047 SNAPC4Q5SXM2 1469 aa21.36■■□□□ 1.01
CHFR-204ENST00000443047 DEKP35659 375 aaKnown RBP21.35■■□□□ 1.01
CHFR-204ENST00000443047 ZNF608Q9ULD9 1512 aaPredicted RBP21.33■■□□□ 1.01
CHFR-204ENST00000443047 MRC2Q9UBG0 1479 aa21.31■■□□□ 1
CHFR-204ENST00000443047 MAPKBP1O60336 1514 aa21.3■■□□□ 1
CHFR-204ENST00000443047 SAMD9Q5K651 1589 aa21.29■■□□□ 1
CHFR-204ENST00000443047 LRRIQ1Q96JM4 1722 aa21.29■■□□□ 1
CHFR-204ENST00000443047 DDX10Q13206 875 aaKnown RBP21.27■■□□□ 1
CHFR-204ENST00000443047 PBRM1Q86U86 1689 aa21.26■□□□□ 0.99
CHFR-204ENST00000443047 FGD6Q6ZV73 1430 aa21.26■□□□□ 0.99
CHFR-204ENST00000443047 IRX6P78412 446 aaPredicted RBP21.24■□□□□ 0.99
CHFR-204ENST00000443047 GRIN2BQ13224 1484 aa21.24■□□□□ 0.99
CHFR-204ENST00000443047 CDK11AQ9UQ88 783 aaPredicted RBP21.23■□□□□ 0.99
CHFR-204ENST00000443047 PTPRKQ15262 1439 aa21.22■□□□□ 0.99
CHFR-204ENST00000443047 NCOA2Q15596 1464 aa21.21■□□□□ 0.99
CHFR-204ENST00000443047 NBR1Q14596 966 aa21.2■□□□□ 0.98
CHFR-204ENST00000443047 CHIC2Q9UKJ5 165 aa21.2■□□□□ 0.98
CHFR-204ENST00000443047 FANCIQ9NVI1 1328 aa21.19■□□□□ 0.98
CHFR-204ENST00000443047 MAGI3Q5TCQ9 1506 aa21.19■□□□□ 0.98
CHFR-204ENST00000443047 ADAMTS12P58397 1594 aa21.19■□□□□ 0.98
CHFR-204ENST00000443047 FBLN2P98095 1184 aa21.18■□□□□ 0.98
CHFR-204ENST00000443047 HIRIP3Q9BW71 556 aaPredicted RBP21.17■□□□□ 0.98
CHFR-204ENST00000443047 ERCC6Q03468 1493 aa21.16■□□□□ 0.98
CHFR-204ENST00000443047 IQGAP2Q13576 1575 aa21.16■□□□□ 0.98
CHFR-204ENST00000443047 CDK13Q14004 1512 aaKnown RBP21.15■□□□□ 0.98
CHFR-204ENST00000443047 RRP7BPQ9NSQ0 103 aa21.15■□□□□ 0.98
CHFR-204ENST00000443047 CCDC136Q96JN2 1154 aa21.14■□□□□ 0.97
CHFR-204ENST00000443047 SALL2Q9Y467 1007 aaPredicted RBP21.14■□□□□ 0.97
CHFR-204ENST00000443047 MYOM3Q5VTT5 1437 aa21.13■□□□□ 0.97
CHFR-204ENST00000443047 IFT140Q96RY7 1462 aa21.12■□□□□ 0.97
CHFR-204ENST00000443047 MYT1LQ9UL68 1186 aa21.09■□□□□ 0.97
CHFR-204ENST00000443047 WDR62O43379 1518 aa21.09■□□□□ 0.97
CHFR-204ENST00000443047 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.08■□□□□ 0.972e-6■■■□□ 17.8
CHFR-204ENST00000443047 CCDC18Q5T9S5 1454 aa21.08■□□□□ 0.96
CHFR-204ENST00000443047 EPRSP07814 1512 aaKnown RBP21.07■□□□□ 0.96
CHFR-204ENST00000443047 SUPT6HQ7KZ85 1726 aaKnown RBP21.07■□□□□ 0.96
CHFR-204ENST00000443047 EHBP1L1Q8N3D4 1523 aa21.06■□□□□ 0.96
CHFR-204ENST00000443047 CHMP7Q8WUX9 453 aaPredicted RBP21.06■□□□□ 0.96
CHFR-204ENST00000443047 EIF4G3O43432 1585 aaKnown RBP21.04■□□□□ 0.96
CHFR-204ENST00000443047 RTN4Q9NQC3 1192 aaKnown RBP21.04■□□□□ 0.96
CHFR-204ENST00000443047 UGGT2Q9NYU1 1516 aa21.04■□□□□ 0.96
CHFR-204ENST00000443047 NAIPQ13075 1403 aa21.03■□□□□ 0.96
CHFR-204ENST00000443047 THOC2Q8NI27 1593 aaKnown RBP21.02■□□□□ 0.96
CHFR-204ENST00000443047 PTPN23Q9H3S7 1636 aa21.02■□□□□ 0.96
CHFR-204ENST00000443047 HECW1Q76N89 1606 aa21.02■□□□□ 0.95
CHFR-204ENST00000443047 HFM1A2PYH4 1435 aa21.01■□□□□ 0.95
CHFR-204ENST00000443047 GRIN2AQ12879 1464 aa21■□□□□ 0.95
CHFR-204ENST00000443047 DISP1Q96F81 1524 aa21■□□□□ 0.95
CHFR-204ENST00000443047 ZNF644Q9H582 1327 aaPredicted RBP21■□□□□ 0.95
CHFR-204ENST00000443047 ANP32CO43423 234 aa20.98■□□□□ 0.95
CHFR-204ENST00000443047 KIAA0586Q9BVV6 1533 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms