RNA–Protein interactions for RNA: ENST00000442691.6

NR1I3-211, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-211ENST00000442691 IGF1RP08069 1367 aa14.68□□□□□ -0.06
NR1I3-211ENST00000442691 TNIKQ9UKE5 1360 aa14.68□□□□□ -0.06
NR1I3-211ENST00000442691 GAPVD1Q14C86 1478 aa14.65□□□□□ -0.06
NR1I3-211ENST00000442691 LOC105371045A0A1W2PR82 267 aa14.64□□□□□ -0.07
NR1I3-211ENST00000442691 DCAF8L1A6NGE4 600 aa14.64□□□□□ -0.07
NR1I3-211ENST00000442691 RAPGEF2Q9Y4G8 1499 aa14.63□□□□□ -0.07
NR1I3-211ENST00000442691 GRIN2BQ13224 1484 aa14.61□□□□□ -0.07
NR1I3-211ENST00000442691 CARMIL1Q5VZK9 1371 aa14.6□□□□□ -0.07
NR1I3-211ENST00000442691 TDRD9Q8NDG6 1382 aaKnown RBP14.59□□□□□ -0.07
NR1I3-211ENST00000442691 PBRM1Q86U86 1689 aa14.56□□□□□ -0.08
NR1I3-211ENST00000442691 EIF4G3O43432 1585 aaKnown RBP14.56□□□□□ -0.08
NR1I3-211ENST00000442691 FHAD1B1AJZ9 1412 aa14.55□□□□□ -0.08
NR1I3-211ENST00000442691 CEP162Q5TB80 1403 aa14.54□□□□□ -0.08
NR1I3-211ENST00000442691 MAGI1Q96QZ7 1491 aaPredicted RBP14.54□□□□□ -0.08
NR1I3-211ENST00000442691 ADAMTS12P58397 1594 aa14.53□□□□□ -0.08
NR1I3-211ENST00000442691 MYCNP04198 464 aaPredicted RBP14.53□□□□□ -0.08
NR1I3-211ENST00000442691 ZNF608Q9ULD9 1512 aaPredicted RBP14.52□□□□□ -0.08
NR1I3-211ENST00000442691 UBTFP17480 764 aaKnown RBP14.52□□□□□ -0.09
NR1I3-211ENST00000442691 AQRO60306 1485 aaKnown RBP eCLIP14.5□□□□□ -0.09
NR1I3-211ENST00000442691 CLIP1P30622 1438 aa14.46□□□□□ -0.09
NR1I3-211ENST00000442691 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.45□□□□□ -0.1
NR1I3-211ENST00000442691 SYNJ2O15056 1496 aa14.44□□□□□ -0.1
NR1I3-211ENST00000442691 SNAPC4Q5SXM2 1469 aa14.44□□□□□ -0.1
NR1I3-211ENST00000442691 CTTNBP2Q8WZ74 1663 aa14.43□□□□□ -0.1
NR1I3-211ENST00000442691 EFCAB5A4FU69 1503 aa14.42□□□□□ -0.1
NR1I3-211ENST00000442691 GRIN2AQ12879 1464 aa14.4□□□□□ -0.1
NR1I3-211ENST00000442691 ATXN8OSP0DMR3 200 aa14.38□□□□□ -0.11
NR1I3-211ENST00000442691 VPS8Q8N3P4 1428 aa14.36□□□□□ -0.11
NR1I3-211ENST00000442691 KIAA0586Q9BVV6 1533 aa14.36□□□□□ -0.11
NR1I3-211ENST00000442691 NUP160Q12769 1436 aa14.34□□□□□ -0.11
NR1I3-211ENST00000442691 ARHGAP35Q9NRY4 1499 aa14.34□□□□□ -0.11
NR1I3-211ENST00000442691 IQGAP2Q13576 1575 aa14.34□□□□□ -0.11
NR1I3-211ENST00000442691 SAMD9Q5K651 1589 aa14.32□□□□□ -0.12
NR1I3-211ENST00000442691 ARAP1Q96P48 1450 aa14.31□□□□□ -0.12
NR1I3-211ENST00000442691 UGGT2Q9NYU1 1516 aa14.31□□□□□ -0.12
NR1I3-211ENST00000442691 CHMP7Q8WUX9 453 aaPredicted RBP14.29□□□□□ -0.12
NR1I3-211ENST00000442691 CEP170Q5SW79 1584 aa14.27□□□□□ -0.12
NR1I3-211ENST00000442691 FMN1Q68DA7 1419 aa14.25□□□□□ -0.13
NR1I3-211ENST00000442691 MAP3K1Q13233 1512 aa14.24□□□□□ -0.13
NR1I3-211ENST00000442691 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.22□□□□□ -0.13
NR1I3-211ENST00000442691 HNRNPUL2Q1KMD3 747 aaKnown RBP14.22□□□□□ -0.13
NR1I3-211ENST00000442691 U3KPZ7 1027 aaPredicted RBP14.22□□□□□ -0.13
NR1I3-211ENST00000442691 FYCO1Q9BQS8 1478 aa14.21□□□□□ -0.13
NR1I3-211ENST00000442691 CHD1O14646 1710 aa14.2□□□□□ -0.14
NR1I3-211ENST00000442691 KIAA0556O60303 1618 aa14.19□□□□□ -0.14
NR1I3-211ENST00000442691 CARMIL2Q6F5E8 1435 aa14.18□□□□□ -0.14
NR1I3-211ENST00000442691 CASKIN1Q8WXD9 1431 aa14.18□□□□□ -0.14
NR1I3-211ENST00000442691 SAMD1Q6SPF0 538 aaPredicted RBP14.18□□□□□ -0.14
NR1I3-211ENST00000442691 DISP1Q96F81 1524 aa14.17□□□□□ -0.14
NR1I3-211ENST00000442691 FHOD3Q2V2M9 1422 aa14.16□□□□□ -0.14
NR1I3-211ENST00000442691 SHROOM2Q13796 1616 aa14.16□□□□□ -0.14
NR1I3-211ENST00000442691 FBLN2P98095 1184 aa14.15□□□□□ -0.14
NR1I3-211ENST00000442691 CLASP1Q7Z460 1538 aa14.15□□□□□ -0.14
NR1I3-211ENST00000442691 PCF11O94913 1555 aaKnown RBP14.13□□□□□ -0.15
NR1I3-211ENST00000442691 APLP2Q06481 763 aa14.13□□□□□ -0.15
NR1I3-211ENST00000442691 RANGAP1P46060 587 aaPredicted RBP14.12□□□□□ -0.15
NR1I3-211ENST00000442691 JPH4Q96JJ6 628 aa14.11□□□□□ -0.15
NR1I3-211ENST00000442691 CFAP43Q8NDM7 1665 aa14.1□□□□□ -0.15
NR1I3-211ENST00000442691 TIAM1Q13009 1591 aa14.1□□□□□ -0.15
NR1I3-211ENST00000442691 HECW1Q76N89 1606 aa14.1□□□□□ -0.15
NR1I3-211ENST00000442691 CCDC18Q5T9S5 1454 aa14.1□□□□□ -0.15
NR1I3-211ENST00000442691 ATF5Q9Y2D1 282 aaPredicted RBP14.09□□□□□ -0.15
NR1I3-211ENST00000442691 TRIM26Q12899 539 aaPredicted RBP14.08□□□□□ -0.16
NR1I3-211ENST00000442691 PRG4Q92954 1404 aaPredicted RBP14.05□□□□□ -0.16
NR1I3-211ENST00000442691 P3H3Q8IVL6 736 aa14.03□□□□□ -0.16
NR1I3-211ENST00000442691 LRRC9Q6ZRR7 1453 aa14.03□□□□□ -0.16
NR1I3-211ENST00000442691 RAPGEF6Q8TEU7 1601 aa14.03□□□□□ -0.16
NR1I3-211ENST00000442691 ABCA8O94911 1581 aa14□□□□□ -0.17
NR1I3-211ENST00000442691 EPRSP07814 1512 aaKnown RBP14□□□□□ -0.17
NR1I3-211ENST00000442691 EHBP1L1Q8N3D4 1523 aa13.99□□□□□ -0.17
NR1I3-211ENST00000442691 PTPRGP23470 1445 aa13.98□□□□□ -0.17
NR1I3-211ENST00000442691 OSCARQ8IYS5 282 aa13.97□□□□□ -0.17
NR1I3-211ENST00000442691 NUP153P49790 1475 aaKnown RBP13.97□□□□□ -0.17
NR1I3-211ENST00000442691 POTEDQ86YR6 584 aa13.95□□□□□ -0.18
NR1I3-211ENST00000442691 UHRF1BP1LA0JNW5 1464 aa13.94□□□□□ -0.18
NR1I3-211ENST00000442691 LRRIQ1Q96JM4 1722 aa13.94□□□□□ -0.18
NR1I3-211ENST00000442691 MTUS2Q5JR59 1369 aa13.94□□□□□ -0.18
NR1I3-211ENST00000442691 RRBP1Q9P2E9 1410 aaKnown RBP13.93□□□□□ -0.18
NR1I3-211ENST00000442691 PLB1Q6P1J6 1458 aa13.93□□□□□ -0.18
NR1I3-211ENST00000442691 UACAQ9BZF9 1416 aa13.92□□□□□ -0.18
NR1I3-211ENST00000442691 KANK4Q5T7N3 995 aaPredicted RBP13.92□□□□□ -0.18
NR1I3-211ENST00000442691 CDK11AQ9UQ88 783 aaPredicted RBP13.92□□□□□ -0.18
NR1I3-211ENST00000442691 ARHGEF11O15085 1522 aa13.91□□□□□ -0.18
NR1I3-211ENST00000442691 ABCC2Q92887 1545 aa13.91□□□□□ -0.18
NR1I3-211ENST00000442691 SUPT6HQ7KZ85 1726 aaKnown RBP13.9□□□□□ -0.18
NR1I3-211ENST00000442691 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.9□□□□□ -0.18
NR1I3-211ENST00000442691 PCGF6Q9BYE7 350 aa13.89□□□□□ -0.19
NR1I3-211ENST00000442691 ERCC6L2Q5T890 1561 aa13.88□□□□□ -0.19
NR1I3-211ENST00000442691 CDK13Q14004 1512 aaKnown RBP13.88□□□□□ -0.19
NR1I3-211ENST00000442691 ATP1B4Q9UN42 357 aaPredicted RBP13.87□□□□□ -0.19
NR1I3-211ENST00000442691 TROQ12816 1431 aaPredicted RBP13.87□□□□□ -0.19
NR1I3-211ENST00000442691 ADCY10Q96PN6 1610 aa13.86□□□□□ -0.19
NR1I3-211ENST00000442691 MAGI3Q5TCQ9 1506 aa13.86□□□□□ -0.19
NR1I3-211ENST00000442691 NCOA2Q15596 1464 aa13.86□□□□□ -0.19
NR1I3-211ENST00000442691 PPARGC1BQ86YN6 1023 aaKnown RBP13.85□□□□□ -0.19
NR1I3-211ENST00000442691 ZNF219Q9P2Y4 722 aaPredicted RBP13.85□□□□□ -0.19
NR1I3-211ENST00000442691 ATP10BO94823 1461 aa13.85□□□□□ -0.19
NR1I3-211ENST00000442691 KDM5BQ9UGL1 1544 aa13.85□□□□□ -0.19
NR1I3-211ENST00000442691 CCNB3Q8WWL7 1395 aa13.84□□□□□ -0.19
NR1I3-211ENST00000442691 RNF39Q9H2S5 420 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms