RNA–Protein interactions for RNA: ENST00000441343.5

ATP1A3-202, Transcript of ATPase Na+/K+ transporting subunit alpha 3, humanhuman

TSL 2

Gene ATP1A3, Length 3,818 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3-202ENST00000441343 MYT1LQ9UL68 1186 aa17.59■□□□□ 0.41
ATP1A3-202ENST00000441343 ERICH6BQ5W0A0 696 aa17.58■□□□□ 0.41
ATP1A3-202ENST00000441343 PKNOX2Q96KN3 472 aa17.57■□□□□ 0.4
ATP1A3-202ENST00000441343 CUX1P39880 1505 aa17.56■□□□□ 0.4
ATP1A3-202ENST00000441343 RRBP1Q9P2E9 1410 aaKnown RBP17.55■□□□□ 0.4
ATP1A3-202ENST00000441343 KIF27Q86VH2 1401 aa17.53■□□□□ 0.4
ATP1A3-202ENST00000441343 IL27Q8NEV9 243 aa17.52■□□□□ 0.39
ATP1A3-202ENST00000441343 CCNB3Q8WWL7 1395 aa17.49■□□□□ 0.39
ATP1A3-202ENST00000441343 ARHGAP35Q9NRY4 1499 aa17.49■□□□□ 0.39
ATP1A3-202ENST00000441343 NCAPD3P42695 1498 aa17.46■□□□□ 0.39
ATP1A3-202ENST00000441343 CUX2O14529 1486 aa17.46■□□□□ 0.39
ATP1A3-202ENST00000441343 NBR1Q14596 966 aa17.46■□□□□ 0.39
ATP1A3-202ENST00000441343 FANCIQ9NVI1 1328 aa17.45■□□□□ 0.38
ATP1A3-202ENST00000441343 HMGXB3Q12766 1538 aa17.43■□□□□ 0.38
ATP1A3-202ENST00000441343 CFTRP13569 1480 aa17.41■□□□□ 0.38
ATP1A3-202ENST00000441343 RAB3GAP2Q9H2M9 1393 aa17.39■□□□□ 0.37
ATP1A3-202ENST00000441343 PODXL2Q9NZ53 605 aa17.38■□□□□ 0.37
ATP1A3-202ENST00000441343 KCNH8Q96L42 1107 aa17.37■□□□□ 0.37
ATP1A3-202ENST00000441343 NEFLP07196 543 aa17.36■□□□□ 0.37
ATP1A3-202ENST00000441343 IGF1RP08069 1367 aa17.36■□□□□ 0.37
ATP1A3-202ENST00000441343 DAXXQ9UER7 740 aaPredicted RBP17.35■□□□□ 0.37
ATP1A3-202ENST00000441343 MAPKBP1O60336 1514 aa17.34■□□□□ 0.37
ATP1A3-202ENST00000441343 TIAM1Q13009 1591 aa17.31■□□□□ 0.36
ATP1A3-202ENST00000441343 SIN3AQ96ST3 1273 aa17.28■□□□□ 0.36
ATP1A3-202ENST00000441343 SETD5Q9C0A6 1442 aa17.28■□□□□ 0.36
ATP1A3-202ENST00000441343 CARMIL1Q5VZK9 1371 aa17.28■□□□□ 0.36
ATP1A3-202ENST00000441343 PHLDB1Q86UU1 1377 aa17.28■□□□□ 0.36
ATP1A3-202ENST00000441343 FAM50AQ14320 339 aaKnown RBP17.27■□□□□ 0.36
ATP1A3-202ENST00000441343 LRRC9Q6ZRR7 1453 aa17.27■□□□□ 0.35
ATP1A3-202ENST00000441343 MAP3K1Q13233 1512 aa17.25■□□□□ 0.35
ATP1A3-202ENST00000441343 P3H3Q8IVL6 736 aa17.25■□□□□ 0.35
ATP1A3-202ENST00000441343 DDX10Q13206 875 aaKnown RBP17.24■□□□□ 0.35
ATP1A3-202ENST00000441343 WDR97A6NE52 1622 aa17.23■□□□□ 0.35
ATP1A3-202ENST00000441343 CDK11AQ9UQ88 783 aaPredicted RBP17.22■□□□□ 0.35
ATP1A3-202ENST00000441343 ATP1B4Q9UN42 357 aaPredicted RBP17.22■□□□□ 0.35
ATP1A3-202ENST00000441343 FGD5Q6ZNL6 1462 aa17.21■□□□□ 0.35
ATP1A3-202ENST00000441343 CADPSQ9ULU8 1353 aa17.19■□□□□ 0.34
ATP1A3-202ENST00000441343 PRDM2Q13029 1718 aa17.18■□□□□ 0.34
ATP1A3-202ENST00000441343 HIRIP3Q9BW71 556 aaPredicted RBP17.18■□□□□ 0.34
ATP1A3-202ENST00000441343 FHAD1B1AJZ9 1412 aa17.17■□□□□ 0.34
ATP1A3-202ENST00000441343 RTL5Q5HYW3 569 aaPredicted RBP17.17■□□□□ 0.34
ATP1A3-202ENST00000441343 PAK3O75914 559 aaPredicted RBP17.16■□□□□ 0.34
ATP1A3-202ENST00000441343 PCF11O94913 1555 aaKnown RBP17.15■□□□□ 0.34
ATP1A3-202ENST00000441343 NOP58Q9Y2X3 529 aaKnown RBP17.15■□□□□ 0.34
ATP1A3-202ENST00000441343 TIMELESSQ9UNS1 1208 aa17.15■□□□□ 0.34
ATP1A3-202ENST00000441343 PPP1R15AO75807 674 aaPredicted RBP17.14■□□□□ 0.33
ATP1A3-202ENST00000441343 FHOD3Q2V2M9 1422 aa17.13■□□□□ 0.33
ATP1A3-202ENST00000441343 CFAP43Q8NDM7 1665 aa17.12■□□□□ 0.33
ATP1A3-202ENST00000441343 RAD54L2Q9Y4B4 1467 aa17.05■□□□□ 0.32
ATP1A3-202ENST00000441343 IRX6P78412 446 aaPredicted RBP17.05■□□□□ 0.32
ATP1A3-202ENST00000441343 TRIM52Q96A61 297 aa17.05■□□□□ 0.32
ATP1A3-202ENST00000441343 ZMYND15Q9H091 742 aa17.04■□□□□ 0.32
ATP1A3-202ENST00000441343 FYCO1Q9BQS8 1478 aa17.03■□□□□ 0.32
ATP1A3-202ENST00000441343 CASKIN1Q8WXD9 1431 aa17.03■□□□□ 0.32
ATP1A3-202ENST00000441343 FANCD2Q9BXW9 1451 aa17.02■□□□□ 0.32
ATP1A3-202ENST00000441343 VSIG10Q8N0Z9 540 aa17.02■□□□□ 0.31
ATP1A3-202ENST00000441343 ANP32CO43423 234 aa17.01■□□□□ 0.31
ATP1A3-202ENST00000441343 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.01■□□□□ 0.31
ATP1A3-202ENST00000441343 CCER2I3L3R5 266 aa17■□□□□ 0.31
ATP1A3-202ENST00000441343 FGD6Q6ZV73 1430 aa16.99■□□□□ 0.31
ATP1A3-202ENST00000441343 TONSLQ96HA7 1378 aa16.98■□□□□ 0.31
ATP1A3-202ENST00000441343 EFCAB5A4FU69 1503 aa16.98■□□□□ 0.31
ATP1A3-202ENST00000441343 PTPRKQ15262 1439 aa16.97■□□□□ 0.31
ATP1A3-202ENST00000441343 AQRO60306 1485 aaKnown RBP eCLIP16.97■□□□□ 0.31
ATP1A3-202ENST00000441343 ABCA10Q8WWZ4 1543 aa16.97■□□□□ 0.31
ATP1A3-202ENST00000441343 POLA1P09884 1462 aaPredicted RBP16.97■□□□□ 0.31
ATP1A3-202ENST00000441343 BRPF3Q9ULD4 1205 aa16.96■□□□□ 0.31
ATP1A3-202ENST00000441343 CCDC18Q5T9S5 1454 aa16.96■□□□□ 0.31
ATP1A3-202ENST00000441343 MTUS2Q5JR59 1369 aa16.94■□□□□ 0.3
ATP1A3-202ENST00000441343 GLIPR1L2Q4G1C9 344 aa16.94■□□□□ 0.3
ATP1A3-202ENST00000441343 DNMBPQ6XZF7 1577 aa16.94■□□□□ 0.3
ATP1A3-202ENST00000441343 TOPBP1Q92547 1522 aa16.94■□□□□ 0.3
ATP1A3-202ENST00000441343 FMN1Q68DA7 1419 aa16.93■□□□□ 0.3
ATP1A3-202ENST00000441343 SNAPC4Q5SXM2 1469 aa16.92■□□□□ 0.3
ATP1A3-202ENST00000441343 HFM1A2PYH4 1435 aa16.92■□□□□ 0.3
ATP1A3-202ENST00000441343 UACAQ9BZF9 1416 aa16.91■□□□□ 0.3
ATP1A3-202ENST00000441343 A0A0U1RQG5 324 aaPredicted RBP16.91■□□□□ 0.3
ATP1A3-202ENST00000441343 CC2D2AQ9P2K1 1620 aa16.91■□□□□ 0.3
ATP1A3-202ENST00000441343 CTTNBP2Q8WZ74 1663 aa16.9■□□□□ 0.3
ATP1A3-202ENST00000441343 NESP48681 1621 aa16.89■□□□□ 0.29
ATP1A3-202ENST00000441343 PTPN23Q9H3S7 1636 aa16.89■□□□□ 0.29
ATP1A3-202ENST00000441343 CUL7Q14999 1698 aa16.89■□□□□ 0.29
ATP1A3-202ENST00000441343 NAIPQ13075 1403 aa16.88■□□□□ 0.29
ATP1A3-202ENST00000441343 NCOA2Q15596 1464 aa16.86■□□□□ 0.29
ATP1A3-202ENST00000441343 MYOM3Q5VTT5 1437 aa16.84■□□□□ 0.29
ATP1A3-202ENST00000441343 LRRIQ1Q96JM4 1722 aa16.84■□□□□ 0.29
ATP1A3-202ENST00000441343 TDRD9Q8NDG6 1382 aaKnown RBP16.84■□□□□ 0.29
ATP1A3-202ENST00000441343 C11orf95C9JLR9 678 aaPredicted RBP16.84■□□□□ 0.29
ATP1A3-202ENST00000441343 RSPH6AQ9H0K4 717 aa16.83■□□□□ 0.29
ATP1A3-202ENST00000441343 ZBTB47Q9UFB7 747 aaPredicted RBP16.83■□□□□ 0.29
ATP1A3-202ENST00000441343 KDM5BQ9UGL1 1544 aa16.83■□□□□ 0.28
ATP1A3-202ENST00000441343 RRP7BPQ9NSQ0 103 aa16.82■□□□□ 0.28
ATP1A3-202ENST00000441343 WASHC2AQ641Q2 1341 aa16.81■□□□□ 0.28
ATP1A3-202ENST00000441343 HNRNPUQ00839 825 aaKnown RBP eCLIP16.81■□□□□ 0.28
ATP1A3-202ENST00000441343 CHIC2Q9UKJ5 165 aa16.81■□□□□ 0.28
ATP1A3-202ENST00000441343 GRIN2BQ13224 1484 aa16.8■□□□□ 0.28
ATP1A3-202ENST00000441343 SAMD9Q5K651 1589 aa16.8■□□□□ 0.28
ATP1A3-202ENST00000441343 IPO9Q96P70 1041 aaKnown RBP16.79■□□□□ 0.28
ATP1A3-202ENST00000441343 NEFMP07197 916 aa16.79■□□□□ 0.28
ATP1A3-202ENST00000441343 ANP32AP39687 249 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms