RNA–Protein interactions for RNA: ENST00000441343.5

ATP1A3-202, Transcript of ATPase Na+/K+ transporting subunit alpha 3, humanhuman

TSL 2

Gene ATP1A3, Length 3,818 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3-202ENST00000441343 NISCHQ9Y2I1 1504 aa24.23■■□□□ 1.47
ATP1A3-202ENST00000441343 PELP1Q8IZL8 1130 aaKnown RBP21.4■■□□□ 1.02
ATP1A3-202ENST00000441343 SHROOM4Q9ULL8 1493 aa21.02■□□□□ 0.95
ATP1A3-202ENST00000441343 HRCP23327 699 aa20.84■□□□□ 0.93
ATP1A3-202ENST00000441343 MYT1Q01538 1121 aa20.79■□□□□ 0.92
ATP1A3-202ENST00000441343 SUPT5HO00267 1087 aaKnown RBP20.73■□□□□ 0.91
ATP1A3-202ENST00000441343 PPARGC1BQ86YN6 1023 aaKnown RBP20.57■□□□□ 0.88
ATP1A3-202ENST00000441343 ZCCHC6Q5VYS8 1495 aaKnown RBP20.53■□□□□ 0.88
ATP1A3-202ENST00000441343 CCDC180Q9P1Z9 1646 aa20.38■□□□□ 0.85
ATP1A3-202ENST00000441343 SCAF1Q9H7N4 1312 aaKnown RBP20.33■□□□□ 0.84
ATP1A3-202ENST00000441343 CHIC1Q5VXU3 224 aa20.23■□□□□ 0.83
ATP1A3-202ENST00000441343 MYO15BQ96JP2 1530 aa20.22■□□□□ 0.83
ATP1A3-202ENST00000441343 DCAF8L2P0C7V8 631 aa20.21■□□□□ 0.83
ATP1A3-202ENST00000441343 PCGF6Q9BYE7 350 aa20.1■□□□□ 0.81
ATP1A3-202ENST00000441343 DCAF1Q9Y4B6 1507 aa19.79■□□□□ 0.76
ATP1A3-202ENST00000441343 TTBK1Q5TCY1 1321 aaPredicted RBP19.73■□□□□ 0.75
ATP1A3-202ENST00000441343 LOC105371045A0A1W2PR82 267 aa19.71■□□□□ 0.75
ATP1A3-202ENST00000441343 BCL11AQ9H165 835 aa19.57■□□□□ 0.72
ATP1A3-202ENST00000441343 PRKCSHP14314 528 aaPredicted RBP19.54■□□□□ 0.72
ATP1A3-202ENST00000441343 ACIN1Q9UKV3 1341 aaKnown RBP19.47■□□□□ 0.71
ATP1A3-202ENST00000441343 GTF3C3Q9Y5Q9 886 aa19.45■□□□□ 0.7
ATP1A3-202ENST00000441343 NEUROD1Q13562 356 aa19.44■□□□□ 0.7
ATP1A3-202ENST00000441343 FAM9AQ8IZU1 332 aaPredicted RBP19.42■□□□□ 0.7
ATP1A3-202ENST00000441343 ABCC9O60706 1549 aa19.41■□□□□ 0.7
ATP1A3-202ENST00000441343 TRIM26Q12899 539 aaPredicted RBP19.38■□□□□ 0.69
ATP1A3-202ENST00000441343 RSF1Q96T23 1441 aaPredicted RBP19.32■□□□□ 0.68
ATP1A3-202ENST00000441343 SCRIBQ14160 1630 aa19.29■□□□□ 0.68
ATP1A3-202ENST00000441343 CENPBP07199 599 aaPredicted RBP19.26■□□□□ 0.67
ATP1A3-202ENST00000441343 TRIM41Q8WV44 630 aa19.23■□□□□ 0.67
ATP1A3-202ENST00000441343 RB1CC1Q8TDY2 1594 aa19.16■□□□□ 0.66
ATP1A3-202ENST00000441343 ZEB1P37275 1124 aaPredicted RBP19.15■□□□□ 0.66
ATP1A3-202ENST00000441343 EHMT2Q96KQ7 1210 aa19.06■□□□□ 0.64
ATP1A3-202ENST00000441343 CECR2Q9BXF3 1484 aa18.97■□□□□ 0.63
ATP1A3-202ENST00000441343 ERICH6Q7L0X2 663 aa18.9■□□□□ 0.62
ATP1A3-202ENST00000441343 MROH2BQ7Z745 1585 aa18.9■□□□□ 0.62
ATP1A3-202ENST00000441343 ANP32EQ9BTT0 268 aa18.88■□□□□ 0.61
ATP1A3-202ENST00000441343 NACADO15069 1562 aa18.82■□□□□ 0.6
ATP1A3-202ENST00000441343 WIZO95785 1651 aa18.81■□□□□ 0.6
ATP1A3-202ENST00000441343 CSRNP3Q8WYN3 585 aa18.8■□□□□ 0.6
ATP1A3-202ENST00000441343 APLP2Q06481 763 aa18.75■□□□□ 0.59
ATP1A3-202ENST00000441343 DIEXFQ68CQ4 756 aaKnown RBP18.67■□□□□ 0.58
ATP1A3-202ENST00000441343 YTHDC1Q96MU7 727 aaKnown RBP18.66■□□□□ 0.58
ATP1A3-202ENST00000441343 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.65■□□□□ 0.58
ATP1A3-202ENST00000441343 BAZ1AQ9NRL2 1556 aaPredicted RBP18.64■□□□□ 0.57
ATP1A3-202ENST00000441343 EIF4G1Q04637 1599 aaKnown RBP18.61■□□□□ 0.57
ATP1A3-202ENST00000441343 CCER1Q8TC90 406 aaPredicted RBP18.57■□□□□ 0.56
ATP1A3-202ENST00000441343 ABCC8Q09428 1581 aa18.51■□□□□ 0.55
ATP1A3-202ENST00000441343 CCDC88BA6NC98 1476 aa18.5■□□□□ 0.55
ATP1A3-202ENST00000441343 TOP2AP11388 1531 aaKnown RBP18.45■□□□□ 0.54
ATP1A3-202ENST00000441343 CEP162Q5TB80 1403 aa18.41■□□□□ 0.54
ATP1A3-202ENST00000441343 TSHZ2Q9NRE2 1034 aa18.41■□□□□ 0.54
ATP1A3-202ENST00000441343 SOGA1O94964 1423 aa18.4■□□□□ 0.54
ATP1A3-202ENST00000441343 WRNQ14191 1432 aaPredicted RBP eCLIP18.4■□□□□ 0.54
ATP1A3-202ENST00000441343 SMARCA4P51532 1647 aa18.39■□□□□ 0.53
ATP1A3-202ENST00000441343 SMARCA2P51531 1590 aa18.39■□□□□ 0.53
ATP1A3-202ENST00000441343 TNIKQ9UKE5 1360 aa18.33■□□□□ 0.52
ATP1A3-202ENST00000441343 ANO8Q9HCE9 1232 aaPredicted RBP18.32■□□□□ 0.52
ATP1A3-202ENST00000441343 RUSC2Q8N2Y8 1516 aa18.32■□□□□ 0.52
ATP1A3-202ENST00000441343 UBTFP17480 764 aaKnown RBP18.3■□□□□ 0.52
ATP1A3-202ENST00000441343 UNC13AQ9UPW8 1703 aa18.24■□□□□ 0.51
ATP1A3-202ENST00000441343 EEA1Q15075 1411 aa18.23■□□□□ 0.51
ATP1A3-202ENST00000441343 SUPT16HQ9Y5B9 1047 aaKnown RBP18.22■□□□□ 0.51
ATP1A3-202ENST00000441343 GOLGA3Q08378 1498 aa18.16■□□□□ 0.5
ATP1A3-202ENST00000441343 PABPN1Q86U42 306 aaKnown RBP eCLIP18.15■□□□□ 0.5
ATP1A3-202ENST00000441343 MIER1Q8N108 512 aa18.13■□□□□ 0.49
ATP1A3-202ENST00000441343 ZNF316A6NFI3 1004 aaPredicted RBP18.12■□□□□ 0.49
ATP1A3-202ENST00000441343 HNRNPUL2Q1KMD3 747 aaKnown RBP18.08■□□□□ 0.48
ATP1A3-202ENST00000441343 SYNJ1O43426 1573 aa18.04■□□□□ 0.48
ATP1A3-202ENST00000441343 CEP164Q9UPV0 1460 aa18.03■□□□□ 0.48
ATP1A3-202ENST00000441343 BICRAQ9NZM4 1560 aa18.02■□□□□ 0.48
ATP1A3-202ENST00000441343 CLIP1P30622 1438 aa18.01■□□□□ 0.47
ATP1A3-202ENST00000441343 CCDC136Q96JN2 1154 aa18.01■□□□□ 0.47
ATP1A3-202ENST00000441343 SALL2Q9Y467 1007 aaPredicted RBP17.99■□□□□ 0.47
ATP1A3-202ENST00000441343 KIF21BO75037 1637 aa17.98■□□□□ 0.47
ATP1A3-202ENST00000441343 PEG3Q9GZU2 1588 aa17.97■□□□□ 0.47
ATP1A3-202ENST00000441343 RANGAP1P46060 587 aaPredicted RBP17.96■□□□□ 0.47
ATP1A3-202ENST00000441343 VPS8Q8N3P4 1428 aa17.94■□□□□ 0.46
ATP1A3-202ENST00000441343 RAPGEF2Q9Y4G8 1499 aa17.92■□□□□ 0.46
ATP1A3-202ENST00000441343 CLSPNQ9HAW4 1339 aa17.9■□□□□ 0.46
ATP1A3-202ENST00000441343 BCANQ96GW7 911 aa17.89■□□□□ 0.45
ATP1A3-202ENST00000441343 UBE2Q2Q8WVN8 375 aa17.89■□□□□ 0.45
ATP1A3-202ENST00000441343 ATAD2BQ9ULI0 1458 aa17.89■□□□□ 0.45
ATP1A3-202ENST00000441343 RBM19Q9Y4C8 960 aaKnown RBP17.88■□□□□ 0.45
ATP1A3-202ENST00000441343 BAZ1BQ9UIG0 1483 aaKnown RBP17.86■□□□□ 0.45
ATP1A3-202ENST00000441343 MSH5O43196 834 aa17.85■□□□□ 0.45
ATP1A3-202ENST00000441343 DEKP35659 375 aaKnown RBP17.82■□□□□ 0.44
ATP1A3-202ENST00000441343 EIF5BO60841 1220 aaKnown RBP17.81■□□□□ 0.44
ATP1A3-202ENST00000441343 SLC24A1O60721 1099 aa17.77■□□□□ 0.44
ATP1A3-202ENST00000441343 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.76■□□□□ 0.43
ATP1A3-202ENST00000441343 TOP2BQ02880 1626 aa17.74■□□□□ 0.43
ATP1A3-202ENST00000441343 KANK4Q5T7N3 995 aaPredicted RBP17.7■□□□□ 0.42
ATP1A3-202ENST00000441343 DHX57Q6P158 1386 aaKnown RBP17.69■□□□□ 0.42
ATP1A3-202ENST00000441343 ARAP1Q96P48 1450 aa17.68■□□□□ 0.42
ATP1A3-202ENST00000441343 PRXQ9BXM0 1461 aa17.67■□□□□ 0.42
ATP1A3-202ENST00000441343 BIVM-ERCC5R4GMW8 1640 aa17.65■□□□□ 0.42
ATP1A3-202ENST00000441343 ERICH3Q5RHP9 1530 aa17.64■□□□□ 0.41
ATP1A3-202ENST00000441343 PLEKHG5O94827 1062 aa17.62■□□□□ 0.41
ATP1A3-202ENST00000441343 FKBP8Q14318 412 aa17.6■□□□□ 0.41
ATP1A3-202ENST00000441343 RTN4Q9NQC3 1192 aaKnown RBP17.6■□□□□ 0.41
ATP1A3-202ENST00000441343 ITGAEP38570 1179 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms