RNA–Protein interactions for RNA: ENST00000439068.6

LSMEM1-202, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene LSMEM1, Length 730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-202ENST00000439068 MRC2Q9UBG0 1479 aa16.61■□□□□ 0.25
LSMEM1-202ENST00000439068 SSUH2Q9Y2M2 353 aa16.61■□□□□ 0.25
LSMEM1-202ENST00000439068 WDR62O43379 1518 aa16.52■□□□□ 0.24
LSMEM1-202ENST00000439068 CEP164Q9UPV0 1460 aa16.51■□□□□ 0.23
LSMEM1-202ENST00000439068 FANCD2Q9BXW9 1451 aa16.47■□□□□ 0.23
LSMEM1-202ENST00000439068 SLC24A1O60721 1099 aa16.45■□□□□ 0.22
LSMEM1-202ENST00000439068 WIZO95785 1651 aa16.44■□□□□ 0.22
LSMEM1-202ENST00000439068 CFTRP13569 1480 aa16.41■□□□□ 0.22
LSMEM1-202ENST00000439068 STAG3Q9UJ98 1225 aa16.38■□□□□ 0.21
LSMEM1-202ENST00000439068 KLHL34Q8N239 644 aa16.35■□□□□ 0.21
LSMEM1-202ENST00000439068 RSF1Q96T23 1441 aaPredicted RBP16.31■□□□□ 0.2
LSMEM1-202ENST00000439068 PLCD3Q8N3E9 789 aa16.31■□□□□ 0.2
LSMEM1-202ENST00000439068 URB2Q14146 1524 aaKnown RBP16.29■□□□□ 0.2
LSMEM1-202ENST00000439068 PKD2Q13563 968 aa16.28■□□□□ 0.2
LSMEM1-202ENST00000439068 MIER1Q8N108 512 aa16.28■□□□□ 0.2
LSMEM1-202ENST00000439068 SPOCK2Q92563 424 aa16.26■□□□□ 0.19
LSMEM1-202ENST00000439068 TOP2AP11388 1531 aaKnown RBP16.25■□□□□ 0.19
LSMEM1-202ENST00000439068 IFT140Q96RY7 1462 aa16.21■□□□□ 0.19
LSMEM1-202ENST00000439068 CYB5RLQ6IPT4 315 aa16.17■□□□□ 0.18
LSMEM1-202ENST00000439068 ABCC8Q09428 1581 aa16.15■□□□□ 0.18
LSMEM1-202ENST00000439068 RIMBP3CA6NJZ7 1639 aa16.14■□□□□ 0.17
LSMEM1-202ENST00000439068 RIMBP3BA6NNM3 1639 aa16.14■□□□□ 0.17
LSMEM1-202ENST00000439068 RIMBP3Q9UFD9 1639 aa16.14■□□□□ 0.17
LSMEM1-202ENST00000439068 ZNF608Q9ULD9 1512 aaPredicted RBP16.14■□□□□ 0.17
LSMEM1-202ENST00000439068 CCDC88BA6NC98 1476 aa16.12■□□□□ 0.17
LSMEM1-202ENST00000439068 ARHGEF11O15085 1522 aa16.1■□□□□ 0.17
LSMEM1-202ENST00000439068 TOPBP1Q92547 1522 aa16.09■□□□□ 0.17
LSMEM1-202ENST00000439068 RBM42Q9BTD8 480 aaKnown RBP16.08■□□□□ 0.16
LSMEM1-202ENST00000439068 AKT1S1Q96B36 256 aa16.07■□□□□ 0.16
LSMEM1-202ENST00000439068 PRDM2Q13029 1718 aa16.05■□□□□ 0.16
LSMEM1-202ENST00000439068 ECM2O94769 699 aaPredicted RBP16.04■□□□□ 0.16
LSMEM1-202ENST00000439068 AQRO60306 1485 aaKnown RBP eCLIP16.02■□□□□ 0.15
LSMEM1-202ENST00000439068 PLEKHG5O94827 1062 aa16.01■□□□□ 0.15
LSMEM1-202ENST00000439068 SPDYE1Q8NFV5 336 aaPredicted RBP16.01■□□□□ 0.15
LSMEM1-202ENST00000439068 REM2Q8IYK8 340 aaPredicted RBP16■□□□□ 0.15
LSMEM1-202ENST00000439068 CLEC11AQ9Y240 323 aa16■□□□□ 0.15
LSMEM1-202ENST00000439068 DNMBPQ6XZF7 1577 aa15.99■□□□□ 0.15
LSMEM1-202ENST00000439068 EIF4G3O43432 1585 aaKnown RBP15.98■□□□□ 0.15
LSMEM1-202ENST00000439068 CHMP7Q8WUX9 453 aaPredicted RBP15.96■□□□□ 0.15
LSMEM1-202ENST00000439068 CIZ1Q9ULV3 898 aaPredicted RBP15.96■□□□□ 0.15
LSMEM1-202ENST00000439068 ZBTB47Q9UFB7 747 aaPredicted RBP15.94■□□□□ 0.14
LSMEM1-202ENST00000439068 SOGA1O94964 1423 aa15.94■□□□□ 0.14
LSMEM1-202ENST00000439068 TDRD9Q8NDG6 1382 aaKnown RBP15.92■□□□□ 0.14
LSMEM1-202ENST00000439068 RGL2O15211 777 aa15.92■□□□□ 0.14
LSMEM1-202ENST00000439068 PLCB2Q00722 1185 aa15.91■□□□□ 0.14
LSMEM1-202ENST00000439068 POLA1P09884 1462 aaPredicted RBP15.91■□□□□ 0.14
LSMEM1-202ENST00000439068 ARAP1Q96P48 1450 aa15.91■□□□□ 0.14
LSMEM1-202ENST00000439068 TARBP1Q13395 1621 aaKnown RBP15.9■□□□□ 0.14
LSMEM1-202ENST00000439068 PRR29P0C7W0 189 aa15.89■□□□□ 0.13
LSMEM1-202ENST00000439068 CREBZFQ9NS37 354 aa15.88■□□□□ 0.13
LSMEM1-202ENST00000439068 CHD1O14646 1710 aa15.88■□□□□ 0.13
LSMEM1-202ENST00000439068 RAD54L2Q9Y4B4 1467 aa15.87■□□□□ 0.13
LSMEM1-202ENST00000439068 NPM1P06748 294 aaKnown RBP eCLIP15.86■□□□□ 0.13
LSMEM1-202ENST00000439068 NUBP1P53384 320 aa15.82■□□□□ 0.12
LSMEM1-202ENST00000439068 PITPNM1O00562 1244 aa15.81■□□□□ 0.12
LSMEM1-202ENST00000439068 SNAPC4Q5SXM2 1469 aa15.81■□□□□ 0.12
LSMEM1-202ENST00000439068 GRIN2BQ13224 1484 aa15.79■□□□□ 0.12
LSMEM1-202ENST00000439068 MAGI1Q96QZ7 1491 aaPredicted RBP15.79■□□□□ 0.12
LSMEM1-202ENST00000439068 WDR97A6NE52 1622 aa15.79■□□□□ 0.12
LSMEM1-202ENST00000439068 SYNJ1O43426 1573 aa15.79■□□□□ 0.12
LSMEM1-202ENST00000439068 MNX1P50219 401 aaPredicted RBP15.78■□□□□ 0.12
LSMEM1-202ENST00000439068 FGD5Q6ZNL6 1462 aa15.78■□□□□ 0.12
LSMEM1-202ENST00000439068 SYNJ2O15056 1496 aa15.75■□□□□ 0.11
LSMEM1-202ENST00000439068 HAP1P54257 671 aaPredicted RBP15.73■□□□□ 0.11
LSMEM1-202ENST00000439068 DCAF8Q5TAQ9 597 aa15.73■□□□□ 0.11
LSMEM1-202ENST00000439068 CLASP1Q7Z460 1538 aa15.73■□□□□ 0.11
LSMEM1-202ENST00000439068 BBXQ8WY36 941 aaPredicted RBP15.7■□□□□ 0.1
LSMEM1-202ENST00000439068 GAPVD1Q14C86 1478 aa15.7■□□□□ 0.1
LSMEM1-202ENST00000439068 GSE1Q14687 1217 aa15.69■□□□□ 0.1
LSMEM1-202ENST00000439068 CUX1P39880 1505 aa15.68■□□□□ 0.1
LSMEM1-202ENST00000439068 CHGAP10645 457 aaKnown RBP15.65■□□□□ 0.1
LSMEM1-202ENST00000439068 RASEFQ8IZ41 740 aa15.65■□□□□ 0.1
LSMEM1-202ENST00000439068 RNF25Q96BH1 459 aaPredicted RBP15.65■□□□□ 0.1
LSMEM1-202ENST00000439068 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.63■□□□□ 0.09
LSMEM1-202ENST00000439068 CHADLQ6NUI6 762 aa15.62■□□□□ 0.09
LSMEM1-202ENST00000439068 PAXIP1Q6ZW49 1069 aaPredicted RBP15.62■□□□□ 0.09
LSMEM1-202ENST00000439068 ABCA10Q8WWZ4 1543 aa15.6■□□□□ 0.09
LSMEM1-202ENST00000439068 FAM212AQ96EL1 285 aa15.59■□□□□ 0.09
LSMEM1-202ENST00000439068 CFAP44Q96MT7 982 aa15.59■□□□□ 0.09
LSMEM1-202ENST00000439068 WRNQ14191 1432 aaPredicted RBP eCLIP15.58■□□□□ 0.08
LSMEM1-202ENST00000439068 PBRM1Q86U86 1689 aa15.55■□□□□ 0.08
LSMEM1-202ENST00000439068 SUPT5HO00267 1087 aaKnown RBP15.55■□□□□ 0.08
LSMEM1-202ENST00000439068 GRIN2AQ12879 1464 aa15.54■□□□□ 0.08
LSMEM1-202ENST00000439068 FHAD1B1AJZ9 1412 aa15.51■□□□□ 0.07
LSMEM1-202ENST00000439068 ABCA5Q8WWZ7 1642 aa15.5■□□□□ 0.07
LSMEM1-202ENST00000439068 RIOK3O14730 519 aaKnown RBP15.49■□□□□ 0.07
LSMEM1-202ENST00000439068 JPH4Q96JJ6 628 aa15.49■□□□□ 0.07
LSMEM1-202ENST00000439068 NUP160Q12769 1436 aa15.49■□□□□ 0.07
LSMEM1-202ENST00000439068 PYGBP11216 843 aa15.47■□□□□ 0.07
LSMEM1-202ENST00000439068 HS6ST3Q8IZP7 471 aa15.47■□□□□ 0.07
LSMEM1-202ENST00000439068 SPRYD3Q8NCJ5 442 aa15.47■□□□□ 0.07
LSMEM1-202ENST00000439068 CEP170Q5SW79 1584 aa15.46■□□□□ 0.07
LSMEM1-202ENST00000439068 ERCC6L2Q5T890 1561 aa15.45■□□□□ 0.06
LSMEM1-202ENST00000439068 CHRM1P11229 460 aaPredicted RBP15.44■□□□□ 0.06
LSMEM1-202ENST00000439068 FAM69CQ0P6D2 419 aa15.44■□□□□ 0.06
LSMEM1-202ENST00000439068 FARP1Q9Y4F1 1045 aaPredicted RBP15.44■□□□□ 0.06
LSMEM1-202ENST00000439068 PRG4Q92954 1404 aaPredicted RBP15.43■□□□□ 0.06
LSMEM1-202ENST00000439068 TSPYL2Q9H2G4 693 aaPredicted RBP15.42■□□□□ 0.06
LSMEM1-202ENST00000439068 ADAMTS12P58397 1594 aa15.41■□□□□ 0.06
LSMEM1-202ENST00000439068 PRKAR2AP13861 404 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms