RNA–Protein interactions for RNA: ENST00000438254.1

CUBN-204, Transcript of cubilin, humanhuman

TSL 3

Gene CUBN, Length 599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-204ENST00000438254 IGF1RP08069 1367 aa16.04■□□□□ 0.16
CUBN-204ENST00000438254 CSRNP3Q8WYN3 585 aa16.04■□□□□ 0.16
CUBN-204ENST00000438254 FAM9AQ8IZU1 332 aaPredicted RBP16.03■□□□□ 0.16
CUBN-204ENST00000438254 EIF4G3O43432 1585 aaKnown RBP16.02■□□□□ 0.16
CUBN-204ENST00000438254 ERICH3Q5RHP9 1530 aa16.02■□□□□ 0.15
CUBN-204ENST00000438254 AQRO60306 1485 aaKnown RBP eCLIP16.02■□□□□ 0.15
CUBN-204ENST00000438254 PRXQ9BXM0 1461 aa16.02■□□□□ 0.15
CUBN-204ENST00000438254 KIF21BO75037 1637 aa15.99■□□□□ 0.15
CUBN-204ENST00000438254 PBRM1Q86U86 1689 aa15.99■□□□□ 0.15
CUBN-204ENST00000438254 KCNA4P22459 653 aa15.98■□□□□ 0.15
CUBN-204ENST00000438254 GRIN2BQ13224 1484 aa15.97■□□□□ 0.15
CUBN-204ENST00000438254 CUL7Q14999 1698 aa15.95■□□□□ 0.14
CUBN-204ENST00000438254 APLP2Q06481 763 aa15.93■□□□□ 0.14
CUBN-204ENST00000438254 CARMIL1Q5VZK9 1371 aa15.92■□□□□ 0.14
CUBN-204ENST00000438254 SLC4A2P04920 1241 aa15.92■□□□□ 0.14
CUBN-204ENST00000438254 ADAMTS12P58397 1594 aa15.92■□□□□ 0.14
CUBN-204ENST00000438254 RAPGEF2Q9Y4G8 1499 aa15.91■□□□□ 0.14
CUBN-204ENST00000438254 POTEHQ6S545 545 aa15.91■□□□□ 0.14
CUBN-204ENST00000438254 GOLGA3Q08378 1498 aa15.9■□□□□ 0.14
CUBN-204ENST00000438254 LOC105371045A0A1W2PR82 267 aa15.89■□□□□ 0.13
CUBN-204ENST00000438254 SNAPC4Q5SXM2 1469 aa15.89■□□□□ 0.13
CUBN-204ENST00000438254 MAGI1Q96QZ7 1491 aaPredicted RBP15.89■□□□□ 0.13
CUBN-204ENST00000438254 FHAD1B1AJZ9 1412 aa15.88■□□□□ 0.13
CUBN-204ENST00000438254 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.82■□□□□ 0.12
CUBN-204ENST00000438254 HNRNPUL2Q1KMD3 747 aaKnown RBP15.82■□□□□ 0.12
CUBN-204ENST00000438254 ZNF219Q9P2Y4 722 aaPredicted RBP15.82■□□□□ 0.12
CUBN-204ENST00000438254 SYNJ2O15056 1496 aa15.82■□□□□ 0.12
CUBN-204ENST00000438254 TNIKQ9UKE5 1360 aa15.81■□□□□ 0.12
CUBN-204ENST00000438254 GRIN2AQ12879 1464 aa15.78■□□□□ 0.12
CUBN-204ENST00000438254 TRHP20396 242 aaPredicted RBP15.77■□□□□ 0.12
CUBN-204ENST00000438254 EHMT2Q96KQ7 1210 aa15.75■□□□□ 0.11
CUBN-204ENST00000438254 NUP160Q12769 1436 aa15.73■□□□□ 0.11
CUBN-204ENST00000438254 UBTFP17480 764 aaKnown RBP15.72■□□□□ 0.11
CUBN-204ENST00000438254 CTTNBP2Q8WZ74 1663 aa15.71■□□□□ 0.11
CUBN-204ENST00000438254 CHD1O14646 1710 aa15.71■□□□□ 0.1
CUBN-204ENST00000438254 CEP170Q5SW79 1584 aa15.7■□□□□ 0.1
CUBN-204ENST00000438254 SAMD1Q6SPF0 538 aaPredicted RBP15.69■□□□□ 0.1
CUBN-204ENST00000438254 CHMP7Q8WUX9 453 aaPredicted RBP15.69■□□□□ 0.1
CUBN-204ENST00000438254 ABCB7O75027 752 aa15.68■□□□□ 0.1
CUBN-204ENST00000438254 CEP162Q5TB80 1403 aa15.68■□□□□ 0.1
CUBN-204ENST00000438254 KIAA0586Q9BVV6 1533 aa15.67■□□□□ 0.1
CUBN-204ENST00000438254 IQGAP2Q13576 1575 aa15.64■□□□□ 0.09
CUBN-204ENST00000438254 CLIP1P30622 1438 aa15.61■□□□□ 0.09
CUBN-204ENST00000438254 FBLN2P98095 1184 aa15.61■□□□□ 0.09
CUBN-204ENST00000438254 UGGT2Q9NYU1 1516 aa15.61■□□□□ 0.09
CUBN-204ENST00000438254 CLASP1Q7Z460 1538 aa15.6■□□□□ 0.09
CUBN-204ENST00000438254 ARHGAP35Q9NRY4 1499 aa15.59■□□□□ 0.09
CUBN-204ENST00000438254 SAMD9Q5K651 1589 aa15.59■□□□□ 0.09
CUBN-204ENST00000438254 EFCAB5A4FU69 1503 aa15.58■□□□□ 0.08
CUBN-204ENST00000438254 ARAP1Q96P48 1450 aa15.56■□□□□ 0.08
CUBN-204ENST00000438254 SHROOM2Q13796 1616 aa15.56■□□□□ 0.08
CUBN-204ENST00000438254 DISP1Q96F81 1524 aa15.53■□□□□ 0.08
CUBN-204ENST00000438254 KIAA0556O60303 1618 aa15.5■□□□□ 0.07
CUBN-204ENST00000438254 JPH4Q96JJ6 628 aa15.5■□□□□ 0.07
CUBN-204ENST00000438254 RANGAP1P46060 587 aaPredicted RBP15.47■□□□□ 0.07
CUBN-204ENST00000438254 OSCARQ8IYS5 282 aa15.47■□□□□ 0.07
CUBN-204ENST00000438254 VPS8Q8N3P4 1428 aa15.47■□□□□ 0.07
CUBN-204ENST00000438254 RBM42Q9BTD8 480 aaKnown RBP15.47■□□□□ 0.07
CUBN-204ENST00000438254 FHOD3Q2V2M9 1422 aa15.46■□□□□ 0.07
CUBN-204ENST00000438254 PRG4Q92954 1404 aaPredicted RBP15.43■□□□□ 0.06
CUBN-204ENST00000438254 MYCNP04198 464 aaPredicted RBP15.43■□□□□ 0.06
CUBN-204ENST00000438254 ERCC6L2Q5T890 1561 aa15.42■□□□□ 0.06
CUBN-204ENST00000438254 CARMIL2Q6F5E8 1435 aa15.42■□□□□ 0.06
CUBN-204ENST00000438254 P3H3Q8IVL6 736 aa15.41■□□□□ 0.06
CUBN-204ENST00000438254 FMN1Q68DA7 1419 aa15.4■□□□□ 0.06
CUBN-204ENST00000438254 PCF11O94913 1555 aaKnown RBP15.37■□□□□ 0.05
CUBN-204ENST00000438254 CASKIN1Q8WXD9 1431 aa15.36■□□□□ 0.05
CUBN-204ENST00000438254 FYCO1Q9BQS8 1478 aa15.34■□□□□ 0.05
CUBN-204ENST00000438254 ABCA8O94911 1581 aa15.32■□□□□ 0.04
CUBN-204ENST00000438254 MAP3K1Q13233 1512 aa15.31■□□□□ 0.04
CUBN-204ENST00000438254 PTPRGP23470 1445 aa15.3■□□□□ 0.04
CUBN-204ENST00000438254 POLA2Q14181 598 aa15.3■□□□□ 0.04
CUBN-204ENST00000438254 RAPGEF6Q8TEU7 1601 aa15.29■□□□□ 0.04
CUBN-204ENST00000438254 PLB1Q6P1J6 1458 aa15.29■□□□□ 0.04
CUBN-204ENST00000438254 LRRIQ1Q96JM4 1722 aa15.29■□□□□ 0.04
CUBN-204ENST00000438254 HECW1Q76N89 1606 aa15.28■□□□□ 0.04
CUBN-204ENST00000438254 ARHGEF11O15085 1522 aa15.27■□□□□ 0.04
CUBN-204ENST00000438254 NUP153P49790 1475 aaKnown RBP15.27■□□□□ 0.04
CUBN-204ENST00000438254 CFAP43Q8NDM7 1665 aa15.25■□□□□ 0.03
CUBN-204ENST00000438254 TIAM1Q13009 1591 aa15.25■□□□□ 0.03
CUBN-204ENST00000438254 EPRSP07814 1512 aaKnown RBP15.24■□□□□ 0.03
CUBN-204ENST00000438254 UHRF1BP1LA0JNW5 1464 aa15.24■□□□□ 0.03
CUBN-204ENST00000438254 UACAQ9BZF9 1416 aa15.24■□□□□ 0.03
CUBN-204ENST00000438254 ABCC2Q92887 1545 aa15.22■□□□□ 0.03
CUBN-204ENST00000438254 CCDC18Q5T9S5 1454 aa15.22■□□□□ 0.03
CUBN-204ENST00000438254 RIMBP3CA6NJZ7 1639 aa15.22■□□□□ 0.03
CUBN-204ENST00000438254 RIMBP3BA6NNM3 1639 aa15.22■□□□□ 0.03
CUBN-204ENST00000438254 RIMBP3Q9UFD9 1639 aa15.22■□□□□ 0.03
CUBN-204ENST00000438254 CDK13Q14004 1512 aaKnown RBP15.18■□□□□ 0.02
CUBN-204ENST00000438254 ADCY10Q96PN6 1610 aa15.18■□□□□ 0.02
CUBN-204ENST00000438254 KANK4Q5T7N3 995 aaPredicted RBP15.18■□□□□ 0.02
CUBN-204ENST00000438254 CHRDL2Q6WN34 429 aa15.18■□□□□ 0.02
CUBN-204ENST00000438254 ATP10BO94823 1461 aa15.18■□□□□ 0.02
CUBN-204ENST00000438254 LRRC9Q6ZRR7 1453 aa15.18■□□□□ 0.02
CUBN-204ENST00000438254 TTBK1Q5TCY1 1321 aaPredicted RBP15.17■□□□□ 0.02
CUBN-204ENST00000438254 MAGI3Q5TCQ9 1506 aa15.17■□□□□ 0.02
CUBN-204ENST00000438254 KDM5BQ9UGL1 1544 aa15.17■□□□□ 0.02
CUBN-204ENST00000438254 ATP1B4Q9UN42 357 aaPredicted RBP15.13■□□□□ 0.01
CUBN-204ENST00000438254 EHBP1L1Q8N3D4 1523 aa15.12■□□□□ 0.01
CUBN-204ENST00000438254 ZCCHC11Q5TAX3 1644 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms