RNA–Protein interactions for RNA: ENST00000438131.5

KRT42P-202, Transcript of keratin 42 pseudogene, humanhuman

TSL 2 BASIC

Gene KRT42P, Length 2,895 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT42P-202ENST00000438131 PRDM2Q13029 1718 aa17.68■□□□□ 0.42
KRT42P-202ENST00000438131 BIVM-ERCC5R4GMW8 1640 aa17.68■□□□□ 0.42
KRT42P-202ENST00000438131 FGD1P98174 961 aa17.66■□□□□ 0.42
KRT42P-202ENST00000438131 RUSC2Q8N2Y8 1516 aa17.65■□□□□ 0.42
KRT42P-202ENST00000438131 TIMELESSQ9UNS1 1208 aa17.64■□□□□ 0.41
KRT42P-202ENST00000438131 CADPSQ9ULU8 1353 aa17.63■□□□□ 0.41
KRT42P-202ENST00000438131 AEBP2Q6ZN18 517 aaPredicted RBP17.62■□□□□ 0.41
KRT42P-202ENST00000438131 ITGAEP38570 1179 aa17.59■□□□□ 0.41
KRT42P-202ENST00000438131 CUX1P39880 1505 aa17.59■□□□□ 0.41
KRT42P-202ENST00000438131 KLHL34Q8N239 644 aa17.56■□□□□ 0.4
KRT42P-202ENST00000438131 AAMPQ13685 434 aa17.56■□□□□ 0.4
KRT42P-202ENST00000438131 BCL11BQ9C0K0 894 aaPredicted RBP17.56■□□□□ 0.4
KRT42P-202ENST00000438131 RTL5Q5HYW3 569 aaPredicted RBP17.55■□□□□ 0.4
KRT42P-202ENST00000438131 RBM10P98175 930 aaKnown RBP17.54■□□□□ 0.4
KRT42P-202ENST00000438131 KIF21BO75037 1637 aa17.5■□□□□ 0.39
KRT42P-202ENST00000438131 TNIKQ9UKE5 1360 aa17.49■□□□□ 0.39
KRT42P-202ENST00000438131 RSPH6AQ9H0K4 717 aa17.49■□□□□ 0.39
KRT42P-202ENST00000438131 GOLGA3Q08378 1498 aa17.47■□□□□ 0.39
KRT42P-202ENST00000438131 RANGAP1P46060 587 aaPredicted RBP17.46■□□□□ 0.39
KRT42P-202ENST00000438131 NOP58Q9Y2X3 529 aaKnown RBP17.46■□□□□ 0.38
KRT42P-202ENST00000438131 CEP164Q9UPV0 1460 aa17.45■□□□□ 0.38
KRT42P-202ENST00000438131 CDK11AQ9UQ88 783 aaPredicted RBP17.44■□□□□ 0.38
KRT42P-202ENST00000438131 FANCD2Q9BXW9 1451 aa17.43■□□□□ 0.38
KRT42P-202ENST00000438131 LAMC3Q9Y6N6 1575 aa17.42■□□□□ 0.38
KRT42P-202ENST00000438131 NCBP3Q53F19 620 aaKnown RBP17.41■□□□□ 0.38
KRT42P-202ENST00000438131 CEP162Q5TB80 1403 aa17.4■□□□□ 0.38
KRT42P-202ENST00000438131 NESP48681 1621 aa17.39■□□□□ 0.38
KRT42P-202ENST00000438131 C11orf95C9JLR9 678 aaPredicted RBP17.38■□□□□ 0.37
KRT42P-202ENST00000438131 PRXQ9BXM0 1461 aa17.35■□□□□ 0.37
KRT42P-202ENST00000438131 DNAJC5BQ9UF47 199 aa17.35■□□□□ 0.37
KRT42P-202ENST00000438131 KIF27Q86VH2 1401 aa17.35■□□□□ 0.37
KRT42P-202ENST00000438131 RAPGEF2Q9Y4G8 1499 aa17.34■□□□□ 0.37
KRT42P-202ENST00000438131 PAK3O75914 559 aaPredicted RBP17.34■□□□□ 0.37
KRT42P-202ENST00000438131 ERICH3Q5RHP9 1530 aa17.33■□□□□ 0.37
KRT42P-202ENST00000438131 DNMBPQ6XZF7 1577 aa17.33■□□□□ 0.36
KRT42P-202ENST00000438131 FGD5Q6ZNL6 1462 aa17.33■□□□□ 0.36
KRT42P-202ENST00000438131 TAF7LQ5H9L4 462 aa17.32■□□□□ 0.36
KRT42P-202ENST00000438131 UBTFP17480 764 aaKnown RBP17.31■□□□□ 0.36
KRT42P-202ENST00000438131 BRPF3Q9ULD4 1205 aa17.28■□□□□ 0.36
KRT42P-202ENST00000438131 TOPBP1Q92547 1522 aa17.28■□□□□ 0.36
KRT42P-202ENST00000438131 PDS5BQ9NTI5 1447 aa17.24■□□□□ 0.35
KRT42P-202ENST00000438131 CUX2O14529 1486 aa17.24■□□□□ 0.35
KRT42P-202ENST00000438131 ARXQ96QS3 562 aa17.23■□□□□ 0.35
KRT42P-202ENST00000438131 URB2Q14146 1524 aaKnown RBP17.23■□□□□ 0.35
KRT42P-202ENST00000438131 POLA1P09884 1462 aaPredicted RBP17.22■□□□□ 0.35
KRT42P-202ENST00000438131 IGF1RP08069 1367 aa17.21■□□□□ 0.35
KRT42P-202ENST00000438131 ABCA10Q8WWZ4 1543 aa17.2■□□□□ 0.34
KRT42P-202ENST00000438131 WASHC2AQ641Q2 1341 aa17.2■□□□□ 0.34
KRT42P-202ENST00000438131 WASHC2CQ9Y4E1 1318 aa17.2■□□□□ 0.34
KRT42P-202ENST00000438131 CLIP1P30622 1438 aa17.19■□□□□ 0.34
KRT42P-202ENST00000438131 KIF21AQ7Z4S6 1674 aa17.19■□□□□ 0.34
KRT42P-202ENST00000438131 HSP90AA2PQ14568 343 aaPredicted RBP17.17■□□□□ 0.34
KRT42P-202ENST00000438131 RAD54L2Q9Y4B4 1467 aa17.15■□□□□ 0.34
KRT42P-202ENST00000438131 HNRNPUL2Q1KMD3 747 aaKnown RBP17.15■□□□□ 0.34
KRT42P-202ENST00000438131 WDR97A6NE52 1622 aa17.14■□□□□ 0.34
KRT42P-202ENST00000438131 NEFMP07197 916 aa17.14■□□□□ 0.33
KRT42P-202ENST00000438131 KCNH8Q96L42 1107 aa17.11■□□□□ 0.33
KRT42P-202ENST00000438131 RRP9O43818 475 aaKnown RBP17.11■□□□□ 0.33
KRT42P-202ENST00000438131 VPS8Q8N3P4 1428 aa17.1■□□□□ 0.33
KRT42P-202ENST00000438131 PAXIP1Q6ZW49 1069 aaPredicted RBP17.1■□□□□ 0.33
KRT42P-202ENST00000438131 CARMIL1Q5VZK9 1371 aa17.09■□□□□ 0.33
KRT42P-202ENST00000438131 ZBTB47Q9UFB7 747 aaPredicted RBP17.08■□□□□ 0.33
KRT42P-202ENST00000438131 FAM43AQ8N2R8 423 aa17.08■□□□□ 0.32
KRT42P-202ENST00000438131 ABCA5Q8WWZ7 1642 aa17.05■□□□□ 0.32
KRT42P-202ENST00000438131 USP35Q9P2H5 1018 aa17.05■□□□□ 0.32
KRT42P-202ENST00000438131 IPO9Q96P70 1041 aaKnown RBP17.04■□□□□ 0.32
KRT42P-202ENST00000438131 ARAP1Q96P48 1450 aa17.04■□□□□ 0.32
KRT42P-202ENST00000438131 CUL7Q14999 1698 aa17.03■□□□□ 0.32
KRT42P-202ENST00000438131 TARBP1Q13395 1621 aaKnown RBP17.03■□□□□ 0.32
KRT42P-202ENST00000438131 MRC2Q9UBG0 1479 aa17.03■□□□□ 0.32
KRT42P-202ENST00000438131 ANP32AP39687 249 aaKnown RBP17.02■□□□□ 0.32
KRT42P-202ENST00000438131 NAP1L2Q9ULW6 460 aaPredicted RBP17.01■□□□□ 0.31
KRT42P-202ENST00000438131 ARHGAP35Q9NRY4 1499 aa16.99■□□□□ 0.31
KRT42P-202ENST00000438131 HSP90AA1P07900 732 aaKnown RBP16.98■□□□□ 0.31
KRT42P-202ENST00000438131 WDR62O43379 1518 aa16.96■□□□□ 0.31
KRT42P-202ENST00000438131 GAPVD1Q14C86 1478 aa16.96■□□□□ 0.31
KRT42P-202ENST00000438131 BBXQ8WY36 941 aaPredicted RBP16.95■□□□□ 0.3
KRT42P-202ENST00000438131 TDRD9Q8NDG6 1382 aaKnown RBP16.95■□□□□ 0.3
KRT42P-202ENST00000438131 GSE1Q14687 1217 aa16.95■□□□□ 0.3
KRT42P-202ENST00000438131 NAP1L5Q96NT1 182 aaPredicted RBP16.95■□□□□ 0.3
KRT42P-202ENST00000438131 CHMP4BQ9H444 224 aaKnown RBP16.94■□□□□ 0.3
KRT42P-202ENST00000438131 RSPH4AQ5TD94 716 aa16.93■□□□□ 0.3
KRT42P-202ENST00000438131 DHX37Q8IY37 1157 aaKnown RBP16.92■□□□□ 0.3
KRT42P-202ENST00000438131 IRX6P78412 446 aaPredicted RBP16.92■□□□□ 0.3
KRT42P-202ENST00000438131 ZNF326Q5BKZ1 582 aaKnown RBP16.91■□□□□ 0.3
KRT42P-202ENST00000438131 PRDM4Q9UKN5 801 aa16.91■□□□□ 0.3
KRT42P-202ENST00000438131 RGS3P49796 1198 aa16.9■□□□□ 0.3
KRT42P-202ENST00000438131 LAS1LQ9Y4W2 734 aaKnown RBP16.9■□□□□ 0.3
KRT42P-202ENST00000438131 TRIM52Q96A61 297 aa16.89■□□□□ 0.29
KRT42P-202ENST00000438131 CTTNBP2Q8WZ74 1663 aa16.88■□□□□ 0.29
KRT42P-202ENST00000438131 DHX57Q6P158 1386 aaKnown RBP16.87■□□□□ 0.29
KRT42P-202ENST00000438131 IFT140Q96RY7 1462 aa16.86■□□□□ 0.29
KRT42P-202ENST00000438131 THOC2Q8NI27 1593 aaKnown RBP16.86■□□□□ 0.29
KRT42P-202ENST00000438131 PBRM1Q86U86 1689 aa16.86■□□□□ 0.29
KRT42P-202ENST00000438131 BRD2P25440 801 aaKnown RBP16.85■□□□□ 0.29
KRT42P-202ENST00000438131 CALD1Q05682 793 aaKnown RBP16.85■□□□□ 0.29
KRT42P-202ENST00000438131 PPP4R2Q9NY27 417 aa16.84■□□□□ 0.29
KRT42P-202ENST00000438131 CHMP4AQ9BY43 222 aa16.84■□□□□ 0.29
KRT42P-202ENST00000438131 GTF2E1P29083 439 aaPredicted RBP16.83■□□□□ 0.28
KRT42P-202ENST00000438131 EFCAB5A4FU69 1503 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms