RNA–Protein interactions for RNA: ENST00000438107.1

FAM239A-202, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 5 BASIC

Gene FAM239A, Length 2,155 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-202ENST00000438107 DNMBPQ6XZF7 1577 aa28.11■■■□□ 2.09
FAM239A-202ENST00000438107 RAB3GAP2Q9H2M9 1393 aa28.07■■■□□ 2.08
FAM239A-202ENST00000438107 DNAJC5BQ9UF47 199 aa28.06■■■□□ 2.08
FAM239A-202ENST00000438107 PCF11O94913 1555 aaKnown RBP28.05■■■□□ 2.08
FAM239A-202ENST00000438107 MAPKBP1O60336 1514 aa28.04■■■□□ 2.08
FAM239A-202ENST00000438107 ABCA10Q8WWZ4 1543 aa28.04■■■□□ 2.08
FAM239A-202ENST00000438107 EFCAB5A4FU69 1503 aa28.03■■■□□ 2.08
FAM239A-202ENST00000438107 TOPBP1Q92547 1522 aa28.02■■■□□ 2.08
FAM239A-202ENST00000438107 SETD5Q9C0A6 1442 aa28.02■■■□□ 2.08
FAM239A-202ENST00000438107 CUL7Q14999 1698 aa28.01■■■□□ 2.08
FAM239A-202ENST00000438107 LAMC3Q9Y6N6 1575 aa27.99■■■□□ 2.07
FAM239A-202ENST00000438107 POLA1P09884 1462 aaPredicted RBP27.99■■■□□ 2.07
FAM239A-202ENST00000438107 PHLDB1Q86UU1 1377 aa27.98■■■□□ 2.07
FAM239A-202ENST00000438107 ITGAEP38570 1179 aa27.97■■■□□ 2.07
FAM239A-202ENST00000438107 RAD54L2Q9Y4B4 1467 aa27.97■■■□□ 2.07
FAM239A-202ENST00000438107 CTTNBP2Q8WZ74 1663 aa27.97■■■□□ 2.07
FAM239A-202ENST00000438107 AQRO60306 1485 aaKnown RBP eCLIP27.97■■■□□ 2.07
FAM239A-202ENST00000438107 FYCO1Q9BQS8 1478 aa27.97■■■□□ 2.07
FAM239A-202ENST00000438107 CASKIN1Q8WXD9 1431 aa27.9■■■□□ 2.06
FAM239A-202ENST00000438107 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.9■■■□□ 2.06
FAM239A-202ENST00000438107 WDR97A6NE52 1622 aa27.86■■■□□ 2.05
FAM239A-202ENST00000438107 FHOD3Q2V2M9 1422 aa27.85■■■□□ 2.05
FAM239A-202ENST00000438107 TIMELESSQ9UNS1 1208 aa27.81■■■□□ 2.04
FAM239A-202ENST00000438107 URB2Q14146 1524 aaKnown RBP27.81■■■□□ 2.04
FAM239A-202ENST00000438107 FAM50AQ14320 339 aaKnown RBP27.8■■■□□ 2.04
FAM239A-202ENST00000438107 PDS5BQ9NTI5 1447 aa27.79■■■□□ 2.04
FAM239A-202ENST00000438107 FMN1Q68DA7 1419 aa27.79■■■□□ 2.04
FAM239A-202ENST00000438107 P3H3Q8IVL6 736 aa27.77■■■□□ 2.04
FAM239A-202ENST00000438107 SNAPC4Q5SXM2 1469 aa27.72■■■□□ 2.03
FAM239A-202ENST00000438107 ABCA5Q8WWZ7 1642 aa27.72■■■□□ 2.03
FAM239A-202ENST00000438107 KIF21AQ7Z4S6 1674 aa27.71■■■□□ 2.03
FAM239A-202ENST00000438107 SAMD9Q5K651 1589 aa27.71■■■□□ 2.03
FAM239A-202ENST00000438107 ATP1B4Q9UN42 357 aaPredicted RBP27.68■■■□□ 2.02
FAM239A-202ENST00000438107 FGD6Q6ZV73 1430 aa27.68■■■□□ 2.02
FAM239A-202ENST00000438107 THOC2Q8NI27 1593 aaKnown RBP27.66■■■□□ 2.02
FAM239A-202ENST00000438107 MYT1Q01538 1121 aa27.63■■■□□ 2.01
FAM239A-202ENST00000438107 SIN3AQ96ST3 1273 aa27.63■■■□□ 2.01
FAM239A-202ENST00000438107 LRRIQ1Q96JM4 1722 aa27.62■■■□□ 2.01
FAM239A-202ENST00000438107 GAPVD1Q14C86 1478 aa27.61■■■□□ 2.01
FAM239A-202ENST00000438107 TDRD9Q8NDG6 1382 aaKnown RBP27.6■■■□□ 2.01
FAM239A-202ENST00000438107 SUPT16HQ9Y5B9 1047 aaKnown RBP27.58■■■□□ 2.01
FAM239A-202ENST00000438107 GRIN2BQ13224 1484 aa27.57■■■□□ 2
FAM239A-202ENST00000438107 MTUS2Q5JR59 1369 aa27.56■■■□□ 2
FAM239A-202ENST00000438107 HFM1A2PYH4 1435 aa27.55■■■□□ 2
FAM239A-202ENST00000438107 SUPT6HQ7KZ85 1726 aaKnown RBP27.55■■■□□ 2
FAM239A-202ENST00000438107 PPP1R15AO75807 674 aaPredicted RBP27.55■■■□□ 2
FAM239A-202ENST00000438107 CCDC18Q5T9S5 1454 aa27.54■■■□□ 2
FAM239A-202ENST00000438107 PTPN23Q9H3S7 1636 aa27.54■■■□□ 2
FAM239A-202ENST00000438107 EHBP1L1Q8N3D4 1523 aa27.53■■■□□ 2
FAM239A-202ENST00000438107 UACAQ9BZF9 1416 aa27.52■■■□□ 2
FAM239A-202ENST00000438107 TARBP1Q13395 1621 aaKnown RBP27.5■■□□□ 1.99
FAM239A-202ENST00000438107 MYOM3Q5VTT5 1437 aa27.5■■□□□ 1.99
FAM239A-202ENST00000438107 NCOA2Q15596 1464 aa27.5■■□□□ 1.99
FAM239A-202ENST00000438107 PTPRKQ15262 1439 aa27.45■■□□□ 1.99
FAM239A-202ENST00000438107 DDX10Q13206 875 aaKnown RBP27.45■■□□□ 1.99
FAM239A-202ENST00000438107 ARHGEF11O15085 1522 aa27.44■■□□□ 1.98
FAM239A-202ENST00000438107 UGGT2Q9NYU1 1516 aa27.43■■□□□ 1.98
FAM239A-202ENST00000438107 NAIPQ13075 1403 aa27.42■■□□□ 1.98
FAM239A-202ENST00000438107 TONSLQ96HA7 1378 aa27.41■■□□□ 1.98
FAM239A-202ENST00000438107 MRC2Q9UBG0 1479 aa27.41■■□□□ 1.98
FAM239A-202ENST00000438107 KCNH8Q96L42 1107 aa27.41■■□□□ 1.98
FAM239A-202ENST00000438107 CCER2I3L3R5 266 aa27.38■■□□□ 1.97
FAM239A-202ENST00000438107 PBRM1Q86U86 1689 aa27.37■■□□□ 1.97
FAM239A-202ENST00000438107 HECW1Q76N89 1606 aa27.36■■□□□ 1.97
FAM239A-202ENST00000438107 TCOF1Q13428 1488 aaKnown RBP27.35■■□□□ 1.97
FAM239A-202ENST00000438107 GCC2Q8IWJ2 1684 aa27.35■■□□□ 1.97
FAM239A-202ENST00000438107 MAGI3Q5TCQ9 1506 aa27.32■■□□□ 1.96
FAM239A-202ENST00000438107 AKNAQ7Z591 1439 aa27.29■■□□□ 1.96
FAM239A-202ENST00000438107 ANP32CO43423 234 aa27.28■■□□□ 1.96
FAM239A-202ENST00000438107 IQGAP2Q13576 1575 aa27.28■■□□□ 1.96
FAM239A-202ENST00000438107 KDM5BQ9UGL1 1544 aa27.26■■□□□ 1.96
FAM239A-202ENST00000438107 ADAMTS12P58397 1594 aa27.26■■□□□ 1.95
FAM239A-202ENST00000438107 WDR62O43379 1518 aa27.22■■□□□ 1.95
FAM239A-202ENST00000438107 EPRSP07814 1512 aaKnown RBP27.22■■□□□ 1.95
FAM239A-202ENST00000438107 MIA2Q96PC5 1412 aa27.21■■□□□ 1.95
FAM239A-202ENST00000438107 HIRIP3Q9BW71 556 aaPredicted RBP27.21■■□□□ 1.95
FAM239A-202ENST00000438107 IFT140Q96RY7 1462 aa27.16■■□□□ 1.94
FAM239A-202ENST00000438107 ZNF608Q9ULD9 1512 aaPredicted RBP27.14■■□□□ 1.94
FAM239A-202ENST00000438107 ERCC6Q03468 1493 aa27.14■■□□□ 1.94
FAM239A-202ENST00000438107 DENND4BO75064 1496 aaPredicted RBP27.12■■□□□ 1.93
FAM239A-202ENST00000438107 TSHZ2Q9NRE2 1034 aa27.12■■□□□ 1.93
FAM239A-202ENST00000438107 CDK13Q14004 1512 aaKnown RBP27.08■■□□□ 1.93
FAM239A-202ENST00000438107 KDM6BO15054 1643 aa27.08■■□□□ 1.93
FAM239A-202ENST00000438107 RRP7BPQ9NSQ0 103 aa27.08■■□□□ 1.93
FAM239A-202ENST00000438107 FKBP8Q14318 412 aa27.05■■□□□ 1.92
FAM239A-202ENST00000438107 NEFLP07196 543 aa27.02■■□□□ 1.92
FAM239A-202ENST00000438107 CHIC2Q9UKJ5 165 aa27.01■■□□□ 1.91
FAM239A-202ENST00000438107 ROCK1Q13464 1354 aa27.01■■□□□ 1.91
FAM239A-202ENST00000438107 KIAA0556O60303 1618 aa26.99■■□□□ 1.91
FAM239A-202ENST00000438107 DNMT1P26358 1616 aaKnown RBP26.99■■□□□ 1.91
FAM239A-202ENST00000438107 TRIM52Q96A61 297 aa26.99■■□□□ 1.91
FAM239A-202ENST00000438107 KIAA0586Q9BVV6 1533 aa26.98■■□□□ 1.91
FAM239A-202ENST00000438107 EIF4G3O43432 1585 aaKnown RBP26.97■■□□□ 1.91
FAM239A-202ENST00000438107 MPHOSPH9Q99550 1183 aa26.97■■□□□ 1.91
FAM239A-202ENST00000438107 DAPK1P53355 1430 aa26.95■■□□□ 1.91
FAM239A-202ENST00000438107 HSPA5P11021 654 aaKnown RBP26.95■■□□□ 1.9
FAM239A-202ENST00000438107 DISP1Q96F81 1524 aa26.93■■□□□ 1.9
FAM239A-202ENST00000438107 RAPGEF6Q8TEU7 1601 aa26.93■■□□□ 1.9
FAM239A-202ENST00000438107 EIF4G2P78344 907 aaKnown RBP eCLIP26.92■■□□□ 1.9
FAM239A-202ENST00000438107 WASHC2AQ641Q2 1341 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms