RNA–Protein interactions for RNA: ENST00000437863.2

PTPN20-210, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 5

Gene PTPN20, Length 3,125 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-210ENST00000437863 CTTNBP2Q8WZ74 1663 aa10.77□□□□□ -0.68
PTPN20-210ENST00000437863 PBRM1Q86U86 1689 aa10.76□□□□□ -0.69
PTPN20-210ENST00000437863 NESP48681 1621 aa10.76□□□□□ -0.69
PTPN20-210ENST00000437863 SLC24A1O60721 1099 aa10.76□□□□□ -0.69
PTPN20-210ENST00000437863 EIF5BO60841 1220 aaKnown RBP10.75□□□□□ -0.69
PTPN20-210ENST00000437863 UBE2Q2Q8WVN8 375 aa10.74□□□□□ -0.69
PTPN20-210ENST00000437863 BCANQ96GW7 911 aa10.74□□□□□ -0.69
PTPN20-210ENST00000437863 ZNF316A6NFI3 1004 aaPredicted RBP10.73□□□□□ -0.69
PTPN20-210ENST00000437863 CEP162Q5TB80 1403 aa10.71□□□□□ -0.69
PTPN20-210ENST00000437863 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.71□□□□□ -0.7
PTPN20-210ENST00000437863 RBM19Q9Y4C8 960 aaKnown RBP10.7□□□□□ -0.7
PTPN20-210ENST00000437863 RAPGEF2Q9Y4G8 1499 aa10.69□□□□□ -0.7
PTPN20-210ENST00000437863 EFCAB5A4FU69 1503 aa10.69□□□□□ -0.7
PTPN20-210ENST00000437863 MAP3K1Q13233 1512 aa10.69□□□□□ -0.7
PTPN20-210ENST00000437863 CUX2O14529 1486 aa10.69□□□□□ -0.7
PTPN20-210ENST00000437863 IFT140Q96RY7 1462 aa10.69□□□□□ -0.7
PTPN20-210ENST00000437863 EHMT2Q96KQ7 1210 aa10.69□□□□□ -0.7
PTPN20-210ENST00000437863 DEKP35659 375 aaKnown RBP10.68□□□□□ -0.7
PTPN20-210ENST00000437863 MSH5O43196 834 aa10.68□□□□□ -0.7
PTPN20-210ENST00000437863 PLEKHG5O94827 1062 aa10.67□□□□□ -0.7
PTPN20-210ENST00000437863 IGF1RP08069 1367 aa10.67□□□□□ -0.7
PTPN20-210ENST00000437863 ADAMTS12P58397 1594 aa10.66□□□□□ -0.7
PTPN20-210ENST00000437863 SAMD9Q5K651 1589 aa10.64□□□□□ -0.71
PTPN20-210ENST00000437863 CLSPNQ9HAW4 1339 aa10.62□□□□□ -0.71
PTPN20-210ENST00000437863 VPS8Q8N3P4 1428 aa10.62□□□□□ -0.71
PTPN20-210ENST00000437863 AQRO60306 1485 aaKnown RBP eCLIP10.61□□□□□ -0.71
PTPN20-210ENST00000437863 CFAP43Q8NDM7 1665 aa10.61□□□□□ -0.71
PTPN20-210ENST00000437863 RTN4Q9NQC3 1192 aaKnown RBP10.61□□□□□ -0.71
PTPN20-210ENST00000437863 GAPVD1Q14C86 1478 aa10.61□□□□□ -0.71
PTPN20-210ENST00000437863 CLIP1P30622 1438 aa10.6□□□□□ -0.71
PTPN20-210ENST00000437863 RAD54L2Q9Y4B4 1467 aa10.59□□□□□ -0.71
PTPN20-210ENST00000437863 ARAP1Q96P48 1450 aa10.59□□□□□ -0.71
PTPN20-210ENST00000437863 CARMIL1Q5VZK9 1371 aa10.59□□□□□ -0.71
PTPN20-210ENST00000437863 EIF4G3O43432 1585 aaKnown RBP10.58□□□□□ -0.72
PTPN20-210ENST00000437863 GRIN2BQ13224 1484 aa10.57□□□□□ -0.72
PTPN20-210ENST00000437863 PKNOX2Q96KN3 472 aa10.57□□□□□ -0.72
PTPN20-210ENST00000437863 FHAD1B1AJZ9 1412 aa10.56□□□□□ -0.72
PTPN20-210ENST00000437863 MAGI1Q96QZ7 1491 aaPredicted RBP10.56□□□□□ -0.72
PTPN20-210ENST00000437863 ITGAEP38570 1179 aa10.55□□□□□ -0.72
PTPN20-210ENST00000437863 ARHGAP35Q9NRY4 1499 aa10.55□□□□□ -0.72
PTPN20-210ENST00000437863 FKBP8Q14318 412 aa10.53□□□□□ -0.72
PTPN20-210ENST00000437863 UGGT2Q9NYU1 1516 aa10.53□□□□□ -0.72
PTPN20-210ENST00000437863 IL27Q8NEV9 243 aa10.53□□□□□ -0.72
PTPN20-210ENST00000437863 FYCO1Q9BQS8 1478 aa10.5□□□□□ -0.73
PTPN20-210ENST00000437863 ERICH6BQ5W0A0 696 aa10.5□□□□□ -0.73
PTPN20-210ENST00000437863 DNAJC5BQ9UF47 199 aa10.5□□□□□ -0.73
PTPN20-210ENST00000437863 IQGAP2Q13576 1575 aa10.5□□□□□ -0.73
PTPN20-210ENST00000437863 NBR1Q14596 966 aa10.49□□□□□ -0.73
PTPN20-210ENST00000437863 PODXL2Q9NZ53 605 aa10.49□□□□□ -0.73
PTPN20-210ENST00000437863 TIAM1Q13009 1591 aa10.48□□□□□ -0.73
PTPN20-210ENST00000437863 MYT1LQ9UL68 1186 aa10.48□□□□□ -0.73
PTPN20-210ENST00000437863 ERCC6Q03468 1493 aa10.47□□□□□ -0.73
PTPN20-210ENST00000437863 DAXXQ9UER7 740 aaPredicted RBP10.46□□□□□ -0.74
PTPN20-210ENST00000437863 SYNJ2O15056 1496 aa10.45□□□□□ -0.74
PTPN20-210ENST00000437863 CASKIN1Q8WXD9 1431 aa10.45□□□□□ -0.74
PTPN20-210ENST00000437863 PCF11O94913 1555 aaKnown RBP10.44□□□□□ -0.74
PTPN20-210ENST00000437863 SNAPC4Q5SXM2 1469 aa10.44□□□□□ -0.74
PTPN20-210ENST00000437863 KIAA0586Q9BVV6 1533 aa10.44□□□□□ -0.74
PTPN20-210ENST00000437863 LRRIQ1Q96JM4 1722 aa10.44□□□□□ -0.74
PTPN20-210ENST00000437863 UBTFP17480 764 aaKnown RBP10.43□□□□□ -0.74
PTPN20-210ENST00000437863 GRIN2AQ12879 1464 aa10.43□□□□□ -0.74
PTPN20-210ENST00000437863 SHROOM2Q13796 1616 aa10.43□□□□□ -0.74
PTPN20-210ENST00000437863 NUP160Q12769 1436 aa10.43□□□□□ -0.74
PTPN20-210ENST00000437863 FMN1Q68DA7 1419 aa10.43□□□□□ -0.74
PTPN20-210ENST00000437863 KIAA0556O60303 1618 aa10.42□□□□□ -0.74
PTPN20-210ENST00000437863 HECW1Q76N89 1606 aa10.41□□□□□ -0.74
PTPN20-210ENST00000437863 ZNF608Q9ULD9 1512 aaPredicted RBP10.4□□□□□ -0.74
PTPN20-210ENST00000437863 CCDC18Q5T9S5 1454 aa10.4□□□□□ -0.74
PTPN20-210ENST00000437863 FANCIQ9NVI1 1328 aa10.4□□□□□ -0.75
PTPN20-210ENST00000437863 RRBP1Q9P2E9 1410 aaKnown RBP10.39□□□□□ -0.75
PTPN20-210ENST00000437863 CEP170Q5SW79 1584 aa10.39□□□□□ -0.75
PTPN20-210ENST00000437863 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.39□□□□□ -0.75
PTPN20-210ENST00000437863 TDRD9Q8NDG6 1382 aaKnown RBP10.38□□□□□ -0.75
PTPN20-210ENST00000437863 ARHGEF11O15085 1522 aa10.38□□□□□ -0.75
PTPN20-210ENST00000437863 ADCY10Q96PN6 1610 aa10.37□□□□□ -0.75
PTPN20-210ENST00000437863 NEFLP07196 543 aa10.37□□□□□ -0.75
PTPN20-210ENST00000437863 EHBP1L1Q8N3D4 1523 aa10.36□□□□□ -0.75
PTPN20-210ENST00000437863 CHD1O14646 1710 aa10.36□□□□□ -0.75
PTPN20-210ENST00000437863 LRRC9Q6ZRR7 1453 aa10.35□□□□□ -0.75
PTPN20-210ENST00000437863 KCNH8Q96L42 1107 aa10.35□□□□□ -0.75
PTPN20-210ENST00000437863 DISP1Q96F81 1524 aa10.34□□□□□ -0.75
PTPN20-210ENST00000437863 SUPT6HQ7KZ85 1726 aaKnown RBP10.34□□□□□ -0.75
PTPN20-210ENST00000437863 TIMELESSQ9UNS1 1208 aa10.33□□□□□ -0.76
PTPN20-210ENST00000437863 RAPGEF6Q8TEU7 1601 aa10.33□□□□□ -0.76
PTPN20-210ENST00000437863 CLASP1Q7Z460 1538 aa10.31□□□□□ -0.76
PTPN20-210ENST00000437863 ABCA8O94911 1581 aa10.29□□□□□ -0.76
PTPN20-210ENST00000437863 CDK11AQ9UQ88 783 aaPredicted RBP10.29□□□□□ -0.76
PTPN20-210ENST00000437863 RTL5Q5HYW3 569 aaPredicted RBP10.29□□□□□ -0.76
PTPN20-210ENST00000437863 PAK3O75914 559 aaPredicted RBP10.27□□□□□ -0.76
PTPN20-210ENST00000437863 TCOF1Q13428 1488 aaKnown RBP10.26□□□□□ -0.77
PTPN20-210ENST00000437863 FHOD3Q2V2M9 1422 aa10.26□□□□□ -0.77
PTPN20-210ENST00000437863 ITSN2Q9NZM3 1697 aa10.26□□□□□ -0.77
PTPN20-210ENST00000437863 NOP58Q9Y2X3 529 aaKnown RBP10.25□□□□□ -0.77
PTPN20-210ENST00000437863 ZMYND15Q9H091 742 aa10.25□□□□□ -0.77
PTPN20-210ENST00000437863 VSIG10Q8N0Z9 540 aa10.24□□□□□ -0.77
PTPN20-210ENST00000437863 EPRSP07814 1512 aaKnown RBP10.24□□□□□ -0.77
PTPN20-210ENST00000437863 CARMIL2Q6F5E8 1435 aa10.23□□□□□ -0.77
PTPN20-210ENST00000437863 A0A0U1RQG5 324 aaPredicted RBP10.22□□□□□ -0.77
PTPN20-210ENST00000437863 IRX6P78412 446 aaPredicted RBP10.22□□□□□ -0.77
PTPN20-210ENST00000437863 GCC2Q8IWJ2 1684 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms