RNA–Protein interactions for RNA: ENST00000437003.3

TMEM116-202, Transcript of transmembrane protein 116, humanhuman

Gene TMEM116, Length 2,761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-202ENST00000437003 CARMIL1Q5VZK9 1371 aa17.87■□□□□ 0.45
TMEM116-202ENST00000437003 DHX57Q6P158 1386 aaKnown RBP17.86■□□□□ 0.45
TMEM116-202ENST00000437003 RRBP1Q9P2E9 1410 aaKnown RBP17.83■□□□□ 0.44
TMEM116-202ENST00000437003 FANCD2Q9BXW9 1451 aa17.82■□□□□ 0.44
TMEM116-202ENST00000437003 KCNH8Q96L42 1107 aa17.79■□□□□ 0.44
TMEM116-202ENST00000437003 CCNB3Q8WWL7 1395 aa17.79■□□□□ 0.44
TMEM116-202ENST00000437003 RAD54L2Q9Y4B4 1467 aa17.73■□□□□ 0.43
TMEM116-202ENST00000437003 ATP1B4Q9UN42 357 aaPredicted RBP17.72■□□□□ 0.43
TMEM116-202ENST00000437003 P3H3Q8IVL6 736 aa17.72■□□□□ 0.43
TMEM116-202ENST00000437003 DNMBPQ6XZF7 1577 aa17.71■□□□□ 0.43
TMEM116-202ENST00000437003 NESP48681 1621 aa17.71■□□□□ 0.43
TMEM116-202ENST00000437003 TIAM1Q13009 1591 aa17.7■□□□□ 0.42
TMEM116-202ENST00000437003 FKBP8Q14318 412 aa17.7■□□□□ 0.42
TMEM116-202ENST00000437003 TOPBP1Q92547 1522 aa17.69■□□□□ 0.42
TMEM116-202ENST00000437003 MAP3K1Q13233 1512 aa17.69■□□□□ 0.42
TMEM116-202ENST00000437003 POLA1P09884 1462 aaPredicted RBP17.69■□□□□ 0.42
TMEM116-202ENST00000437003 FHAD1B1AJZ9 1412 aa17.68■□□□□ 0.42
TMEM116-202ENST00000437003 ABCA10Q8WWZ4 1543 aa17.67■□□□□ 0.42
TMEM116-202ENST00000437003 LRRC9Q6ZRR7 1453 aa17.66■□□□□ 0.42
TMEM116-202ENST00000437003 FAM50AQ14320 339 aaKnown RBP17.64■□□□□ 0.41
TMEM116-202ENST00000437003 RAB3GAP2Q9H2M9 1393 aa17.63■□□□□ 0.41
TMEM116-202ENST00000437003 EIF5BO60841 1220 aaKnown RBP17.62■□□□□ 0.41
TMEM116-202ENST00000437003 PHLDB1Q86UU1 1377 aa17.61■□□□□ 0.41
TMEM116-202ENST00000437003 FHOD3Q2V2M9 1422 aa17.61■□□□□ 0.41
TMEM116-202ENST00000437003 RBM19Q9Y4C8 960 aaKnown RBP17.6■□□□□ 0.41
TMEM116-202ENST00000437003 PCF11O94913 1555 aaKnown RBP17.59■□□□□ 0.41
TMEM116-202ENST00000437003 CUL7Q14999 1698 aa17.57■□□□□ 0.4
TMEM116-202ENST00000437003 LAMC3Q9Y6N6 1575 aa17.56■□□□□ 0.4
TMEM116-202ENST00000437003 URB2Q14146 1524 aaKnown RBP17.55■□□□□ 0.4
TMEM116-202ENST00000437003 CFAP43Q8NDM7 1665 aa17.55■□□□□ 0.4
TMEM116-202ENST00000437003 EFCAB5A4FU69 1503 aa17.55■□□□□ 0.4
TMEM116-202ENST00000437003 SETD5Q9C0A6 1442 aa17.55■□□□□ 0.4
TMEM116-202ENST00000437003 DDX10Q13206 875 aaKnown RBP17.54■□□□□ 0.4
TMEM116-202ENST00000437003 NEFLP07196 543 aa17.53■□□□□ 0.4
TMEM116-202ENST00000437003 SIN3AQ96ST3 1273 aa17.53■□□□□ 0.4
TMEM116-202ENST00000437003 TDRD9Q8NDG6 1382 aaKnown RBP17.53■□□□□ 0.4
TMEM116-202ENST00000437003 FYCO1Q9BQS8 1478 aa17.53■□□□□ 0.4
TMEM116-202ENST00000437003 CASKIN1Q8WXD9 1431 aa17.52■□□□□ 0.39
TMEM116-202ENST00000437003 CTTNBP2Q8WZ74 1663 aa17.51■□□□□ 0.39
TMEM116-202ENST00000437003 MAPKBP1O60336 1514 aa17.51■□□□□ 0.39
TMEM116-202ENST00000437003 TRIM52Q96A61 297 aa17.5■□□□□ 0.39
TMEM116-202ENST00000437003 PDS5BQ9NTI5 1447 aa17.49■□□□□ 0.39
TMEM116-202ENST00000437003 FMN1Q68DA7 1419 aa17.48■□□□□ 0.39
TMEM116-202ENST00000437003 AQRO60306 1485 aaKnown RBP eCLIP17.48■□□□□ 0.39
TMEM116-202ENST00000437003 DNAJC5BQ9UF47 199 aa17.48■□□□□ 0.39
TMEM116-202ENST00000437003 WDR97A6NE52 1622 aa17.47■□□□□ 0.39
TMEM116-202ENST00000437003 GAPVD1Q14C86 1478 aa17.47■□□□□ 0.39
TMEM116-202ENST00000437003 HIRIP3Q9BW71 556 aaPredicted RBP17.45■□□□□ 0.38
TMEM116-202ENST00000437003 ABCA5Q8WWZ7 1642 aa17.44■□□□□ 0.38
TMEM116-202ENST00000437003 MSH5O43196 834 aa17.43■□□□□ 0.38
TMEM116-202ENST00000437003 MTUS2Q5JR59 1369 aa17.41■□□□□ 0.38
TMEM116-202ENST00000437003 NCBP3Q53F19 620 aaKnown RBP17.41■□□□□ 0.38
TMEM116-202ENST00000437003 SNAPC4Q5SXM2 1469 aa17.41■□□□□ 0.38
TMEM116-202ENST00000437003 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.4■□□□□ 0.38
TMEM116-202ENST00000437003 KIF21AQ7Z4S6 1674 aa17.38■□□□□ 0.37
TMEM116-202ENST00000437003 FGD6Q6ZV73 1430 aa17.38■□□□□ 0.37
TMEM116-202ENST00000437003 SAMD9Q5K651 1589 aa17.37■□□□□ 0.37
TMEM116-202ENST00000437003 IRX6P78412 446 aaPredicted RBP17.32■□□□□ 0.36
TMEM116-202ENST00000437003 PPP1R15AO75807 674 aaPredicted RBP17.32■□□□□ 0.36
TMEM116-202ENST00000437003 TARBP1Q13395 1621 aaKnown RBP17.31■□□□□ 0.36
TMEM116-202ENST00000437003 GRIN2BQ13224 1484 aa17.31■□□□□ 0.36
TMEM116-202ENST00000437003 TIMELESSQ9UNS1 1208 aa17.31■□□□□ 0.36
TMEM116-202ENST00000437003 ANP32CO43423 234 aa17.3■□□□□ 0.36
TMEM116-202ENST00000437003 LRRIQ1Q96JM4 1722 aa17.3■□□□□ 0.36
TMEM116-202ENST00000437003 PLEKHG5O94827 1062 aa17.3■□□□□ 0.36
TMEM116-202ENST00000437003 NCOA2Q15596 1464 aa17.3■□□□□ 0.36
TMEM116-202ENST00000437003 MYOM3Q5VTT5 1437 aa17.27■□□□□ 0.36
TMEM116-202ENST00000437003 PTPRKQ15262 1439 aa17.27■□□□□ 0.35
TMEM116-202ENST00000437003 THOC2Q8NI27 1593 aaKnown RBP17.26■□□□□ 0.35
TMEM116-202ENST00000437003 CCDC18Q5T9S5 1454 aa17.26■□□□□ 0.35
TMEM116-202ENST00000437003 TONSLQ96HA7 1378 aa17.25■□□□□ 0.35
TMEM116-202ENST00000437003 HFM1A2PYH4 1435 aa17.25■□□□□ 0.35
TMEM116-202ENST00000437003 SUPT6HQ7KZ85 1726 aaKnown RBP17.25■□□□□ 0.35
TMEM116-202ENST00000437003 CCER2I3L3R5 266 aa17.24■□□□□ 0.35
TMEM116-202ENST00000437003 EHBP1L1Q8N3D4 1523 aa17.24■□□□□ 0.35
TMEM116-202ENST00000437003 CDK11AQ9UQ88 783 aaPredicted RBP17.23■□□□□ 0.35
TMEM116-202ENST00000437003 PBRM1Q86U86 1689 aa17.23■□□□□ 0.35
TMEM116-202ENST00000437003 UACAQ9BZF9 1416 aa17.21■□□□□ 0.35
TMEM116-202ENST00000437003 ARID3CA6NKF2 412 aa17.21■□□□□ 0.35
TMEM116-202ENST00000437003 PTPN23Q9H3S7 1636 aa17.21■□□□□ 0.35
TMEM116-202ENST00000437003 FANCIQ9NVI1 1328 aa17.2■□□□□ 0.34
TMEM116-202ENST00000437003 NAIPQ13075 1403 aa17.2■□□□□ 0.34
TMEM116-202ENST00000437003 IQGAP2Q13576 1575 aa17.2■□□□□ 0.34
TMEM116-202ENST00000437003 PLPPR3Q6T4P5 718 aa17.2■□□□□ 0.34
TMEM116-202ENST00000437003 CHIC2Q9UKJ5 165 aa17.2■□□□□ 0.34
TMEM116-202ENST00000437003 MRC2Q9UBG0 1479 aa17.19■□□□□ 0.34
TMEM116-202ENST00000437003 MAGI3Q5TCQ9 1506 aa17.19■□□□□ 0.34
TMEM116-202ENST00000437003 HNRNPUQ00839 825 aaKnown RBP eCLIP17.19■□□□□ 0.34
TMEM116-202ENST00000437003 UGGT2Q9NYU1 1516 aa17.19■□□□□ 0.34
TMEM116-202ENST00000437003 RRP7BPQ9NSQ0 103 aa17.18■□□□□ 0.34
TMEM116-202ENST00000437003 ADAMTS12P58397 1594 aa17.17■□□□□ 0.34
TMEM116-202ENST00000437003 HECW1Q76N89 1606 aa17.16■□□□□ 0.34
TMEM116-202ENST00000437003 ARHGEF11O15085 1522 aa17.15■□□□□ 0.34
TMEM116-202ENST00000437003 EPRSP07814 1512 aaKnown RBP17.15■□□□□ 0.34
TMEM116-202ENST00000437003 CDK13Q14004 1512 aaKnown RBP17.12■□□□□ 0.33
TMEM116-202ENST00000437003 ZNF608Q9ULD9 1512 aaPredicted RBP17.11■□□□□ 0.33
TMEM116-202ENST00000437003 DEKP35659 375 aaKnown RBP17.1■□□□□ 0.33
TMEM116-202ENST00000437003 TCOF1Q13428 1488 aaKnown RBP17.09■□□□□ 0.33
TMEM116-202ENST00000437003 IFT140Q96RY7 1462 aa17.09■□□□□ 0.33
TMEM116-202ENST00000437003 RTN4Q9NQC3 1192 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms