RNA–Protein interactions for RNA: ENST00000434054.6

CLCN2-204, Transcript of chloride voltage-gated channel 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCN2, Length 2,897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-204ENST00000434054 TDRD9Q8NDG6 1382 aaKnown RBP25.06■■□□□ 1.6
CLCN2-204ENST00000434054 IGF1RP08069 1367 aa25■■□□□ 1.59
CLCN2-204ENST00000434054 CLSPNQ9HAW4 1339 aa24.96■■□□□ 1.59
CLCN2-204ENST00000434054 BCANQ96GW7 911 aa24.95■■□□□ 1.59
CLCN2-204ENST00000434054 ARAP1Q96P48 1450 aa24.94■■□□□ 1.58
CLCN2-204ENST00000434054 PRXQ9BXM0 1461 aa24.94■■□□□ 1.58
CLCN2-204ENST00000434054 MRC2Q9UBG0 1479 aa24.93■■□□□ 1.58
CLCN2-204ENST00000434054 CARMIL1Q5VZK9 1371 aa24.92■■□□□ 1.58
CLCN2-204ENST00000434054 TSHZ2Q9NRE2 1034 aa24.91■■□□□ 1.58
CLCN2-204ENST00000434054 ABCA10Q8WWZ4 1543 aa24.89■■□□□ 1.57
CLCN2-204ENST00000434054 AQRO60306 1485 aaKnown RBP eCLIP24.82■■□□□ 1.561e-6■■■■■ 27.6
CLCN2-204ENST00000434054 CCNB3Q8WWL7 1395 aa24.81■■□□□ 1.56
CLCN2-204ENST00000434054 HIRIP3Q9BW71 556 aaPredicted RBP24.81■■□□□ 1.56
CLCN2-204ENST00000434054 DDX10Q13206 875 aaKnown RBP24.8■■□□□ 1.56
CLCN2-204ENST00000434054 RRBP1Q9P2E9 1410 aaKnown RBP24.78■■□□□ 1.56
CLCN2-204ENST00000434054 GAPVD1Q14C86 1478 aa24.78■■□□□ 1.56
CLCN2-204ENST00000434054 P3H3Q8IVL6 736 aa24.77■■□□□ 1.56
CLCN2-204ENST00000434054 SIN3AQ96ST3 1273 aa24.77■■□□□ 1.56
CLCN2-204ENST00000434054 ERICH3Q5RHP9 1530 aa24.77■■□□□ 1.56
CLCN2-204ENST00000434054 RAB3GAP2Q9H2M9 1393 aa24.74■■□□□ 1.55
CLCN2-204ENST00000434054 ZNF608Q9ULD9 1512 aaPredicted RBP24.73■■□□□ 1.55
CLCN2-204ENST00000434054 FKBP8Q14318 412 aa24.72■■□□□ 1.55
CLCN2-204ENST00000434054 WDR62O43379 1518 aa24.68■■□□□ 1.54
CLCN2-204ENST00000434054 TARBP1Q13395 1621 aaKnown RBP24.68■■□□□ 1.54
CLCN2-204ENST00000434054 FAM50AQ14320 339 aaKnown RBP24.68■■□□□ 1.54
CLCN2-204ENST00000434054 ATP1B4Q9UN42 357 aaPredicted RBP24.68■■□□□ 1.54
CLCN2-204ENST00000434054 ARHGAP35Q9NRY4 1499 aa24.67■■□□□ 1.54
CLCN2-204ENST00000434054 WDR97A6NE52 1622 aa24.64■■□□□ 1.54
CLCN2-204ENST00000434054 FBLN2P98095 1184 aa24.64■■□□□ 1.53
CLCN2-204ENST00000434054 TRIM52Q96A61 297 aa24.64■■□□□ 1.53
CLCN2-204ENST00000434054 ABCA5Q8WWZ7 1642 aa24.62■■□□□ 1.53
CLCN2-204ENST00000434054 IFT140Q96RY7 1462 aa24.61■■□□□ 1.53
CLCN2-204ENST00000434054 ANP32EQ9BTT0 268 aa24.6■■□□□ 1.53
CLCN2-204ENST00000434054 THOC2Q8NI27 1593 aaKnown RBP24.6■■□□□ 1.53
CLCN2-204ENST00000434054 MAPKBP1O60336 1514 aa24.6■■□□□ 1.53
CLCN2-204ENST00000434054 SETD5Q9C0A6 1442 aa24.51■■□□□ 1.51
CLCN2-204ENST00000434054 PHLDB1Q86UU1 1377 aa24.51■■□□□ 1.51
CLCN2-204ENST00000434054 CUL7Q14999 1698 aa24.51■■□□□ 1.51
CLCN2-204ENST00000434054 GRIN2BQ13224 1484 aa24.5■■□□□ 1.51
CLCN2-204ENST00000434054 PPP1R15AO75807 674 aaPredicted RBP24.47■■□□□ 1.51
CLCN2-204ENST00000434054 CHMP7Q8WUX9 453 aaPredicted RBP24.46■■□□□ 1.51
CLCN2-204ENST00000434054 SNAPC4Q5SXM2 1469 aa24.46■■□□□ 1.51
CLCN2-204ENST00000434054 PBRM1Q86U86 1689 aa24.44■■□□□ 1.5
CLCN2-204ENST00000434054 FHAD1B1AJZ9 1412 aa24.44■■□□□ 1.5
CLCN2-204ENST00000434054 FHOD3Q2V2M9 1422 aa24.44■■□□□ 1.5
CLCN2-204ENST00000434054 EIF4G3O43432 1585 aaKnown RBP24.44■■□□□ 1.5
CLCN2-204ENST00000434054 NEFLP07196 543 aa24.43■■□□□ 1.5
CLCN2-204ENST00000434054 RBM19Q9Y4C8 960 aaKnown RBP24.4■■□□□ 1.5
CLCN2-204ENST00000434054 ANP32CO43423 234 aa24.39■■□□□ 1.49
CLCN2-204ENST00000434054 TIAM1Q13009 1591 aa24.38■■□□□ 1.49
CLCN2-204ENST00000434054 LRRC9Q6ZRR7 1453 aa24.37■■□□□ 1.49
CLCN2-204ENST00000434054 ADAMTS12P58397 1594 aa24.35■■□□□ 1.49
CLCN2-204ENST00000434054 ARID3CA6NKF2 412 aa24.33■■□□□ 1.49
CLCN2-204ENST00000434054 IRX6P78412 446 aaPredicted RBP24.33■■□□□ 1.49
CLCN2-204ENST00000434054 CTTNBP2Q8WZ74 1663 aa24.28■■□□□ 1.48
CLCN2-204ENST00000434054 GRIN2AQ12879 1464 aa24.23■■□□□ 1.47
CLCN2-204ENST00000434054 CCER2I3L3R5 266 aa24.23■■□□□ 1.47
CLCN2-204ENST00000434054 BCL11AQ9H165 835 aa24.22■■□□□ 1.47
CLCN2-204ENST00000434054 TONSLQ96HA7 1378 aa24.21■■□□□ 1.47
CLCN2-204ENST00000434054 HNRNPUQ00839 825 aaKnown RBP eCLIP24.2■■□□□ 1.46
CLCN2-204ENST00000434054 MAGI1Q96QZ7 1491 aaPredicted RBP24.19■■□□□ 1.46
CLCN2-204ENST00000434054 SYNJ2O15056 1496 aa24.18■■□□□ 1.46
CLCN2-204ENST00000434054 PCF11O94913 1555 aaKnown RBP24.16■■□□□ 1.46
CLCN2-204ENST00000434054 IQGAP2Q13576 1575 aa24.16■■□□□ 1.46
CLCN2-204ENST00000434054 TIMELESSQ9UNS1 1208 aa24.16■■□□□ 1.46
CLCN2-204ENST00000434054 MAP3K1Q13233 1512 aa24.15■■□□□ 1.46
CLCN2-204ENST00000434054 MSH5O43196 834 aa24.15■■□□□ 1.46
CLCN2-204ENST00000434054 EFCAB5A4FU69 1503 aa24.14■■□□□ 1.45
CLCN2-204ENST00000434054 FMN1Q68DA7 1419 aa24.09■■□□□ 1.45
CLCN2-204ENST00000434054 KIAA0586Q9BVV6 1533 aa24.09■■□□□ 1.45
CLCN2-204ENST00000434054 JPH4Q96JJ6 628 aa24.08■■□□□ 1.45
CLCN2-204ENST00000434054 CEP170Q5SW79 1584 aa24.07■■□□□ 1.44
CLCN2-204ENST00000434054 PTPRKQ15262 1439 aa24.05■■□□□ 1.44
CLCN2-204ENST00000434054 SAMD9Q5K651 1589 aa24.04■■□□□ 1.44
CLCN2-204ENST00000434054 CHIC2Q9UKJ5 165 aa24.04■■□□□ 1.44
CLCN2-204ENST00000434054 CASKIN1Q8WXD9 1431 aa24.03■■□□□ 1.44
CLCN2-204ENST00000434054 CCDC18Q5T9S5 1454 aa24.02■■□□□ 1.44
CLCN2-204ENST00000434054 CCDC184Q52MB2 194 aa24.02■■□□□ 1.44
CLCN2-204ENST00000434054 RRP7BPQ9NSQ0 103 aa24.01■■□□□ 1.43
CLCN2-204ENST00000434054 MTUS2Q5JR59 1369 aa24■■□□□ 1.43
CLCN2-204ENST00000434054 FGD6Q6ZV73 1430 aa24■■□□□ 1.43
CLCN2-204ENST00000434054 CFAP43Q8NDM7 1665 aa23.99■■□□□ 1.43
CLCN2-204ENST00000434054 FYCO1Q9BQS8 1478 aa23.98■■□□□ 1.43
CLCN2-204ENST00000434054 HSPA5P11021 654 aaKnown RBP23.97■■□□□ 1.43
CLCN2-204ENST00000434054 WASHC2AQ641Q2 1341 aa23.97■■□□□ 1.43
CLCN2-204ENST00000434054 CDK11AQ9UQ88 783 aaPredicted RBP23.97■■□□□ 1.43
CLCN2-204ENST00000434054 DISP1Q96F81 1524 aa23.96■■□□□ 1.43
CLCN2-204ENST00000434054 NUP160Q12769 1436 aa23.95■■□□□ 1.43
CLCN2-204ENST00000434054 CNGB1Q14028 1251 aaPredicted RBP23.95■■□□□ 1.42
CLCN2-204ENST00000434054 UGGT2Q9NYU1 1516 aa23.94■■□□□ 1.42
CLCN2-204ENST00000434054 FAM9BQ8IZU0 186 aa23.94■■□□□ 1.42
CLCN2-204ENST00000434054 UACAQ9BZF9 1416 aa23.92■■□□□ 1.42
CLCN2-204ENST00000434054 FOXD1Q16676 465 aa23.92■■□□□ 1.42
CLCN2-204ENST00000434054 KIAA0556O60303 1618 aa23.89■■□□□ 1.42
CLCN2-204ENST00000434054 CHD1O14646 1710 aa23.89■■□□□ 1.41
CLCN2-204ENST00000434054 ERICH6Q7L0X2 663 aa23.89■■□□□ 1.41
CLCN2-204ENST00000434054 HFM1A2PYH4 1435 aa23.88■■□□□ 1.41
CLCN2-204ENST00000434054 NAIPQ13075 1403 aa23.88■■□□□ 1.41
CLCN2-204ENST00000434054 B4GALNT3Q6L9W6 998 aa23.87■■□□□ 1.41
CLCN2-204ENST00000434054 CARMIL2Q6F5E8 1435 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms