RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 GRIN2BQ13224 1484 aa9.85□□□□□ -0.83
HMGB3P24-201ENST00000433260 TRIM41Q8WV44 630 aa9.83□□□□□ -0.84
HMGB3P24-201ENST00000433260 ABCA5Q8WWZ7 1642 aa9.82□□□□□ -0.84
HMGB3P24-201ENST00000433260 ZBTB22O15209 634 aa9.8□□□□□ -0.84
HMGB3P24-201ENST00000433260 MAGI1Q96QZ7 1491 aaPredicted RBP9.79□□□□□ -0.84
HMGB3P24-201ENST00000433260 SYNJ2O15056 1496 aa9.79□□□□□ -0.84
HMGB3P24-201ENST00000433260 KIF27Q86VH2 1401 aa9.75□□□□□ -0.85
HMGB3P24-201ENST00000433260 SLC4A2P04920 1241 aa9.75□□□□□ -0.85
HMGB3P24-201ENST00000433260 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.75□□□□□ -0.85
HMGB3P24-201ENST00000433260 ERICH3Q5RHP9 1530 aa9.74□□□□□ -0.85
HMGB3P24-201ENST00000433260 RUSC2Q8N2Y8 1516 aa9.74□□□□□ -0.85
HMGB3P24-201ENST00000433260 RIMBP3CA6NJZ7 1639 aa9.74□□□□□ -0.85
HMGB3P24-201ENST00000433260 RIMBP3BA6NNM3 1639 aa9.74□□□□□ -0.85
HMGB3P24-201ENST00000433260 RIMBP3Q9UFD9 1639 aa9.74□□□□□ -0.85
HMGB3P24-201ENST00000433260 IGF1RP08069 1367 aa9.74□□□□□ -0.85
HMGB3P24-201ENST00000433260 FHAD1B1AJZ9 1412 aa9.73□□□□□ -0.85
HMGB3P24-201ENST00000433260 ADAMTS12P58397 1594 aa9.73□□□□□ -0.85
HMGB3P24-201ENST00000433260 CYB5RLQ6IPT4 315 aa9.73□□□□□ -0.85
HMGB3P24-201ENST00000433260 GRIN2AQ12879 1464 aa9.72□□□□□ -0.85
HMGB3P24-201ENST00000433260 ARHGEF11O15085 1522 aa9.71□□□□□ -0.86
HMGB3P24-201ENST00000433260 CLASP1Q7Z460 1538 aa9.7□□□□□ -0.86
HMGB3P24-201ENST00000433260 CEP170Q5SW79 1584 aa9.69□□□□□ -0.86
HMGB3P24-201ENST00000433260 FAM9AQ8IZU1 332 aaPredicted RBP9.69□□□□□ -0.86
HMGB3P24-201ENST00000433260 CARMIL1Q5VZK9 1371 aa9.68□□□□□ -0.86
HMGB3P24-201ENST00000433260 MYCNP04198 464 aaPredicted RBP9.67□□□□□ -0.86
HMGB3P24-201ENST00000433260 CUL7Q14999 1698 aa9.67□□□□□ -0.86
HMGB3P24-201ENST00000433260 POTEDQ86YR6 584 aa9.66□□□□□ -0.86
HMGB3P24-201ENST00000433260 NUP160Q12769 1436 aa9.65□□□□□ -0.86
HMGB3P24-201ENST00000433260 JPH4Q96JJ6 628 aa9.65□□□□□ -0.86
HMGB3P24-201ENST00000433260 ERCC6L2Q5T890 1561 aa9.63□□□□□ -0.87
HMGB3P24-201ENST00000433260 TTBK1Q5TCY1 1321 aaPredicted RBP9.63□□□□□ -0.87
HMGB3P24-201ENST00000433260 ARAP1Q96P48 1450 aa9.63□□□□□ -0.87
HMGB3P24-201ENST00000433260 RAPGEF2Q9Y4G8 1499 aa9.61□□□□□ -0.87
HMGB3P24-201ENST00000433260 PRG4Q92954 1404 aaPredicted RBP9.61□□□□□ -0.87
HMGB3P24-201ENST00000433260 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.59□□□□□ -0.87
HMGB3P24-201ENST00000433260 HNRNPUL2Q1KMD3 747 aaKnown RBP9.59□□□□□ -0.87
HMGB3P24-201ENST00000433260 KIAA0586Q9BVV6 1533 aa9.59□□□□□ -0.87
HMGB3P24-201ENST00000433260 SHROOM2Q13796 1616 aa9.59□□□□□ -0.87
HMGB3P24-201ENST00000433260 TRHP20396 242 aaPredicted RBP9.57□□□□□ -0.88
HMGB3P24-201ENST00000433260 RANGAP1P46060 587 aaPredicted RBP9.57□□□□□ -0.88
HMGB3P24-201ENST00000433260 PRXQ9BXM0 1461 aa9.54□□□□□ -0.88
HMGB3P24-201ENST00000433260 ATXN8OSP0DMR3 200 aa9.54□□□□□ -0.88
HMGB3P24-201ENST00000433260 IQGAP2Q13576 1575 aa9.54□□□□□ -0.88
HMGB3P24-201ENST00000433260 CTTNBP2Q8WZ74 1663 aa9.53□□□□□ -0.88
HMGB3P24-201ENST00000433260 SAMD1Q6SPF0 538 aaPredicted RBP9.53□□□□□ -0.88
HMGB3P24-201ENST00000433260 P3H3Q8IVL6 736 aa9.53□□□□□ -0.88
HMGB3P24-201ENST00000433260 EEA1Q15075 1411 aa9.52□□□□□ -0.89
HMGB3P24-201ENST00000433260 U3KPZ7 1027 aaPredicted RBP9.52□□□□□ -0.89
HMGB3P24-201ENST00000433260 CARMIL2Q6F5E8 1435 aa9.51□□□□□ -0.89
HMGB3P24-201ENST00000433260 NPM1P06748 294 aaKnown RBP eCLIP9.51□□□□□ -0.89
HMGB3P24-201ENST00000433260 UBTFP17480 764 aaKnown RBP9.5□□□□□ -0.89
HMGB3P24-201ENST00000433260 APLP2Q06481 763 aa9.5□□□□□ -0.89
HMGB3P24-201ENST00000433260 PTPRGP23470 1445 aa9.49□□□□□ -0.89
HMGB3P24-201ENST00000433260 TNIKQ9UKE5 1360 aa9.48□□□□□ -0.89
HMGB3P24-201ENST00000433260 DISP1Q96F81 1524 aa9.47□□□□□ -0.89
HMGB3P24-201ENST00000433260 UGGT2Q9NYU1 1516 aa9.46□□□□□ -0.9
HMGB3P24-201ENST00000433260 KIAA0556O60303 1618 aa9.45□□□□□ -0.9
HMGB3P24-201ENST00000433260 KIF21BO75037 1637 aa9.44□□□□□ -0.9
HMGB3P24-201ENST00000433260 ADCY10Q96PN6 1610 aa9.43□□□□□ -0.9
HMGB3P24-201ENST00000433260 GOLGA3Q08378 1498 aa9.43□□□□□ -0.9
HMGB3P24-201ENST00000433260 ARID3CA6NKF2 412 aa9.42□□□□□ -0.9
HMGB3P24-201ENST00000433260 UACAQ9BZF9 1416 aa9.41□□□□□ -0.9
HMGB3P24-201ENST00000433260 FAM69CQ0P6D2 419 aa9.4□□□□□ -0.9
HMGB3P24-201ENST00000433260 PLB1Q6P1J6 1458 aa9.39□□□□□ -0.91
HMGB3P24-201ENST00000433260 RNF39Q9H2S5 420 aa9.38□□□□□ -0.91
HMGB3P24-201ENST00000433260 ATP1B4Q9UN42 357 aaPredicted RBP9.38□□□□□ -0.91
HMGB3P24-201ENST00000433260 KIF13AQ9H1H9 1805 aa9.38□□□□□ -0.91
HMGB3P24-201ENST00000433260 LOC105371045A0A1W2PR82 267 aa9.37□□□□□ -0.91
HMGB3P24-201ENST00000433260 KCNH8Q96L42 1107 aa9.37□□□□□ -0.91
HMGB3P24-201ENST00000433260 SAMD9Q5K651 1589 aa9.37□□□□□ -0.91
HMGB3P24-201ENST00000433260 ABCC2Q92887 1545 aa9.36□□□□□ -0.91
HMGB3P24-201ENST00000433260 UHRF1BP1LA0JNW5 1464 aa9.36□□□□□ -0.91
HMGB3P24-201ENST00000433260 FHOD3Q2V2M9 1422 aa9.36□□□□□ -0.91
HMGB3P24-201ENST00000433260 ZCCHC11Q5TAX3 1644 aaKnown RBP9.35□□□□□ -0.91
HMGB3P24-201ENST00000433260 TSPOAP1O95153 1857 aa9.35□□□□□ -0.91
HMGB3P24-201ENST00000433260 ASXL2Q76L83 1435 aa9.34□□□□□ -0.91
HMGB3P24-201ENST00000433260 C1QBPQ07021 282 aaKnown RBP9.34□□□□□ -0.91
HMGB3P24-201ENST00000433260 ABCA8O94911 1581 aa9.33□□□□□ -0.92
HMGB3P24-201ENST00000433260 MAPKBP1O60336 1514 aa9.33□□□□□ -0.92
HMGB3P24-201ENST00000433260 KDM5BQ9UGL1 1544 aa9.33□□□□□ -0.92
HMGB3P24-201ENST00000433260 ABCC10Q5T3U5 1492 aa9.32□□□□□ -0.92
HMGB3P24-201ENST00000433260 RAPGEF6Q8TEU7 1601 aa9.31□□□□□ -0.92
HMGB3P24-201ENST00000433260 ARHGAP35Q9NRY4 1499 aa9.31□□□□□ -0.92
HMGB3P24-201ENST00000433260 DIP2BQ9P265 1576 aa9.31□□□□□ -0.92
HMGB3P24-201ENST00000433260 EFCAB5A4FU69 1503 aa9.31□□□□□ -0.92
HMGB3P24-201ENST00000433260 ATP10BO94823 1461 aa9.3□□□□□ -0.92
HMGB3P24-201ENST00000433260 ATF5Q9Y2D1 282 aaPredicted RBP9.28□□□□□ -0.92
HMGB3P24-201ENST00000433260 PLEKHD1A6NEE1 506 aa9.27□□□□□ -0.93
HMGB3P24-201ENST00000433260 EPRSP07814 1512 aaKnown RBP9.26□□□□□ -0.93
HMGB3P24-201ENST00000433260 CLIP1P30622 1438 aa9.26□□□□□ -0.93
HMGB3P24-201ENST00000433260 NUP153P49790 1475 aaKnown RBP9.26□□□□□ -0.93
HMGB3P24-201ENST00000433260 WDR7Q9Y4E6 1490 aa9.26□□□□□ -0.93
HMGB3P24-201ENST00000433260 FMN1Q68DA7 1419 aa9.25□□□□□ -0.93
HMGB3P24-201ENST00000433260 ZNF219Q9P2Y4 722 aaPredicted RBP9.25□□□□□ -0.93
HMGB3P24-201ENST00000433260 GLI2P10070 1586 aa9.24□□□□□ -0.93
HMGB3P24-201ENST00000433260 CAPN15O75808 1086 aa9.24□□□□□ -0.93
HMGB3P24-201ENST00000433260 CDK13Q14004 1512 aaKnown RBP9.23□□□□□ -0.93
HMGB3P24-201ENST00000433260 MAP3K4Q9Y6R4 1608 aa9.22□□□□□ -0.93
HMGB3P24-201ENST00000433260 PPRC1Q5VV67 1664 aaKnown RBP9.22□□□□□ -0.93
HMGB3P24-201ENST00000433260 LRRIQ1Q96JM4 1722 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms