RNA–Protein interactions for RNA: ENST00000431873.6

ALK-202, Transcript of ALK receptor tyrosine kinase, humanhuman

TSL 5

Gene ALK, Length 2,520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-202ENST00000431873 SUPT16HQ9Y5B9 1047 aaKnown RBP14.08□□□□□ -0.15
ALK-202ENST00000431873 TIAM1Q13009 1591 aa14.08□□□□□ -0.16
ALK-202ENST00000431873 RAB3GAP2Q9H2M9 1393 aa14.07□□□□□ -0.16
ALK-202ENST00000431873 FHAD1B1AJZ9 1412 aa14.07□□□□□ -0.16
ALK-202ENST00000431873 DNMBPQ6XZF7 1577 aa14.07□□□□□ -0.16
ALK-202ENST00000431873 MAPKBP1O60336 1514 aa14.05□□□□□ -0.16
ALK-202ENST00000431873 ABCA10Q8WWZ4 1543 aa14.05□□□□□ -0.16
ALK-202ENST00000431873 LRRC9Q6ZRR7 1453 aa14.03□□□□□ -0.16
ALK-202ENST00000431873 SETD5Q9C0A6 1442 aa14.03□□□□□ -0.16
ALK-202ENST00000431873 ITGAEP38570 1179 aa14.03□□□□□ -0.16
ALK-202ENST00000431873 TOPBP1Q92547 1522 aa14.01□□□□□ -0.17
ALK-202ENST00000431873 EFCAB5A4FU69 1503 aa14□□□□□ -0.17
ALK-202ENST00000431873 POLA1P09884 1462 aaPredicted RBP13.99□□□□□ -0.17
ALK-202ENST00000431873 CUL7Q14999 1698 aa13.99□□□□□ -0.17
ALK-202ENST00000431873 CFAP43Q8NDM7 1665 aa13.98□□□□□ -0.17
ALK-202ENST00000431873 TIMELESSQ9UNS1 1208 aa13.98□□□□□ -0.17
ALK-202ENST00000431873 AQRO60306 1485 aaKnown RBP eCLIP13.98□□□□□ -0.17
ALK-202ENST00000431873 PHLDB1Q86UU1 1377 aa13.97□□□□□ -0.17
ALK-202ENST00000431873 AEBP2Q6ZN18 517 aaPredicted RBP13.96□□□□□ -0.17
ALK-202ENST00000431873 FYCO1Q9BQS8 1478 aa13.96□□□□□ -0.17
ALK-202ENST00000431873 RAD54L2Q9Y4B4 1467 aa13.96□□□□□ -0.17
ALK-202ENST00000431873 PCF11O94913 1555 aaKnown RBP13.95□□□□□ -0.18
ALK-202ENST00000431873 LAMC3Q9Y6N6 1575 aa13.94□□□□□ -0.18
ALK-202ENST00000431873 CASKIN1Q8WXD9 1431 aa13.94□□□□□ -0.18
ALK-202ENST00000431873 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.93□□□□□ -0.18
ALK-202ENST00000431873 NCBP3Q53F19 620 aaKnown RBP13.93□□□□□ -0.18
ALK-202ENST00000431873 WDR97A6NE52 1622 aa13.93□□□□□ -0.18
ALK-202ENST00000431873 KCNH8Q96L42 1107 aa13.91□□□□□ -0.18
ALK-202ENST00000431873 NESP48681 1621 aa13.91□□□□□ -0.18
ALK-202ENST00000431873 CTTNBP2Q8WZ74 1663 aa13.91□□□□□ -0.18
ALK-202ENST00000431873 FAM50AQ14320 339 aaKnown RBP13.9□□□□□ -0.18
ALK-202ENST00000431873 FHOD3Q2V2M9 1422 aa13.9□□□□□ -0.18
ALK-202ENST00000431873 FMN1Q68DA7 1419 aa13.9□□□□□ -0.18
ALK-202ENST00000431873 TSHZ2Q9NRE2 1034 aa13.9□□□□□ -0.18
ALK-202ENST00000431873 SIN3AQ96ST3 1273 aa13.89□□□□□ -0.19
ALK-202ENST00000431873 PPP1R15AO75807 674 aaPredicted RBP13.88□□□□□ -0.19
ALK-202ENST00000431873 DDX10Q13206 875 aaKnown RBP13.88□□□□□ -0.19
ALK-202ENST00000431873 URB2Q14146 1524 aaKnown RBP13.87□□□□□ -0.19
ALK-202ENST00000431873 P3H3Q8IVL6 736 aa13.87□□□□□ -0.19
ALK-202ENST00000431873 ABCA5Q8WWZ7 1642 aa13.85□□□□□ -0.19
ALK-202ENST00000431873 PRKCSHP14314 528 aaPredicted RBP13.85□□□□□ -0.19
ALK-202ENST00000431873 PDS5BQ9NTI5 1447 aa13.85□□□□□ -0.19
ALK-202ENST00000431873 CCER2I3L3R5 266 aa13.84□□□□□ -0.19
ALK-202ENST00000431873 SNAPC4Q5SXM2 1469 aa13.83□□□□□ -0.2
ALK-202ENST00000431873 SAMD9Q5K651 1589 aa13.82□□□□□ -0.2
ALK-202ENST00000431873 ATP1B4Q9UN42 357 aaPredicted RBP13.82□□□□□ -0.2
ALK-202ENST00000431873 GAPVD1Q14C86 1478 aa13.82□□□□□ -0.2
ALK-202ENST00000431873 THOC2Q8NI27 1593 aaKnown RBP13.8□□□□□ -0.2
ALK-202ENST00000431873 FGD6Q6ZV73 1430 aa13.8□□□□□ -0.2
ALK-202ENST00000431873 TDRD9Q8NDG6 1382 aaKnown RBP13.78□□□□□ -0.2
ALK-202ENST00000431873 ANP32CO43423 234 aa13.78□□□□□ -0.2
ALK-202ENST00000431873 KCNA4P22459 653 aa13.78□□□□□ -0.2
ALK-202ENST00000431873 FKBP8Q14318 412 aa13.78□□□□□ -0.2
ALK-202ENST00000431873 MTUS2Q5JR59 1369 aa13.77□□□□□ -0.21
ALK-202ENST00000431873 GRIN2BQ13224 1484 aa13.76□□□□□ -0.21
ALK-202ENST00000431873 HFM1A2PYH4 1435 aa13.76□□□□□ -0.21
ALK-202ENST00000431873 UACAQ9BZF9 1416 aa13.76□□□□□ -0.21
ALK-202ENST00000431873 CCDC18Q5T9S5 1454 aa13.75□□□□□ -0.21
ALK-202ENST00000431873 TONSLQ96HA7 1378 aa13.75□□□□□ -0.21
ALK-202ENST00000431873 KIF21AQ7Z4S6 1674 aa13.74□□□□□ -0.21
ALK-202ENST00000431873 NEFLP07196 543 aa13.74□□□□□ -0.21
ALK-202ENST00000431873 ANP32EQ9BTT0 268 aa13.73□□□□□ -0.21
ALK-202ENST00000431873 TARBP1Q13395 1621 aaKnown RBP13.73□□□□□ -0.21
ALK-202ENST00000431873 HIRIP3Q9BW71 556 aaPredicted RBP13.72□□□□□ -0.21
ALK-202ENST00000431873 MYOM3Q5VTT5 1437 aa13.72□□□□□ -0.21
ALK-202ENST00000431873 EHBP1L1Q8N3D4 1523 aa13.72□□□□□ -0.21
ALK-202ENST00000431873 BCANQ96GW7 911 aa13.72□□□□□ -0.21
ALK-202ENST00000431873 PTPN23Q9H3S7 1636 aa13.71□□□□□ -0.21
ALK-202ENST00000431873 NCOA2Q15596 1464 aa13.71□□□□□ -0.21
ALK-202ENST00000431873 PTPRKQ15262 1439 aa13.71□□□□□ -0.22
ALK-202ENST00000431873 SUPT6HQ7KZ85 1726 aaKnown RBP13.7□□□□□ -0.22
ALK-202ENST00000431873 LRRIQ1Q96JM4 1722 aa13.7□□□□□ -0.22
ALK-202ENST00000431873 NAIPQ13075 1403 aa13.69□□□□□ -0.22
ALK-202ENST00000431873 TRIM52Q96A61 297 aa13.69□□□□□ -0.22
ALK-202ENST00000431873 ARHGEF11O15085 1522 aa13.69□□□□□ -0.22
ALK-202ENST00000431873 UGGT2Q9NYU1 1516 aa13.67□□□□□ -0.22
ALK-202ENST00000431873 KDM5BQ9UGL1 1544 aa13.65□□□□□ -0.22
ALK-202ENST00000431873 HECW1Q76N89 1606 aa13.64□□□□□ -0.23
ALK-202ENST00000431873 TCOF1Q13428 1488 aaKnown RBP13.64□□□□□ -0.23
ALK-202ENST00000431873 PBRM1Q86U86 1689 aa13.64□□□□□ -0.23
ALK-202ENST00000431873 AMER1Q5JTC6 1135 aaPredicted RBP13.63□□□□□ -0.23
ALK-202ENST00000431873 IQGAP2Q13576 1575 aa13.63□□□□□ -0.23
ALK-202ENST00000431873 ADAMTS12P58397 1594 aa13.62□□□□□ -0.23
ALK-202ENST00000431873 AKNAQ7Z591 1439 aa13.62□□□□□ -0.23
ALK-202ENST00000431873 RBM19Q9Y4C8 960 aaKnown RBP13.62□□□□□ -0.23
ALK-202ENST00000431873 MRC2Q9UBG0 1479 aa13.61□□□□□ -0.23
ALK-202ENST00000431873 MAGI3Q5TCQ9 1506 aa13.61□□□□□ -0.23
ALK-202ENST00000431873 MIA2Q96PC5 1412 aa13.6□□□□□ -0.23
ALK-202ENST00000431873 DNAJC5BQ9UF47 199 aa13.6□□□□□ -0.23
ALK-202ENST00000431873 EPRSP07814 1512 aaKnown RBP13.6□□□□□ -0.23
ALK-202ENST00000431873 PHF23Q9BUL5 403 aaPredicted RBP13.57□□□□□ -0.24
ALK-202ENST00000431873 WDR62O43379 1518 aa13.56□□□□□ -0.24
ALK-202ENST00000431873 GCC2Q8IWJ2 1684 aa13.56□□□□□ -0.24
ALK-202ENST00000431873 IFT140Q96RY7 1462 aa13.56□□□□□ -0.24
ALK-202ENST00000431873 WASHC2AQ641Q2 1341 aa13.56□□□□□ -0.24
ALK-202ENST00000431873 HNRNPUQ00839 825 aaKnown RBP eCLIP13.55□□□□□ -0.24
ALK-202ENST00000431873 DENND4BO75064 1496 aaPredicted RBP13.55□□□□□ -0.24
ALK-202ENST00000431873 HSPA5P11021 654 aaKnown RBP13.55□□□□□ -0.24
ALK-202ENST00000431873 EIF4G2P78344 907 aaKnown RBP eCLIP13.53□□□□□ -0.24
ALK-202ENST00000431873 ERICH6BQ5W0A0 696 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms