RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 DNMBPQ6XZF7 1577 aa19.48■□□□□ 0.71
SNRNP200-202ENST00000429650 ITGAEP38570 1179 aa19.46■□□□□ 0.71
SNRNP200-202ENST00000429650 FHAD1B1AJZ9 1412 aa19.46■□□□□ 0.71
SNRNP200-202ENST00000429650 CFAP43Q8NDM7 1665 aa19.44■□□□□ 0.7
SNRNP200-202ENST00000429650 ABCA10Q8WWZ4 1543 aa19.44■□□□□ 0.7
SNRNP200-202ENST00000429650 RAD54L2Q9Y4B4 1467 aa19.43■□□□□ 0.7
SNRNP200-202ENST00000429650 RAB3GAP2Q9H2M9 1393 aa19.43■□□□□ 0.7
SNRNP200-202ENST00000429650 PCF11O94913 1555 aaKnown RBP19.43■□□□□ 0.7
SNRNP200-202ENST00000429650 TOPBP1Q92547 1522 aa19.42■□□□□ 0.7
SNRNP200-202ENST00000429650 POLA1P09884 1462 aaPredicted RBP19.42■□□□□ 0.7
SNRNP200-202ENST00000429650 PHLDB1Q86UU1 1377 aa19.41■□□□□ 0.7
SNRNP200-202ENST00000429650 MAPKBP1O60336 1514 aa19.38■□□□□ 0.69
SNRNP200-202ENST00000429650 NESP48681 1621 aa19.37■□□□□ 0.69
SNRNP200-202ENST00000429650 CUL7Q14999 1698 aa19.37■□□□□ 0.69
SNRNP200-202ENST00000429650 EFCAB5A4FU69 1503 aa19.36■□□□□ 0.69
SNRNP200-202ENST00000429650 SETD5Q9C0A6 1442 aa19.36■□□□□ 0.69
SNRNP200-202ENST00000429650 P3H3Q8IVL6 736 aa19.36■□□□□ 0.69
SNRNP200-202ENST00000429650 FHOD3Q2V2M9 1422 aa19.35■□□□□ 0.69
SNRNP200-202ENST00000429650 FYCO1Q9BQS8 1478 aa19.34■□□□□ 0.69
SNRNP200-202ENST00000429650 CTTNBP2Q8WZ74 1663 aa19.33■□□□□ 0.69
SNRNP200-202ENST00000429650 AQRO60306 1485 aaKnown RBP eCLIP19.31■□□□□ 0.686e-7■■■■■ 33
SNRNP200-202ENST00000429650 CASKIN1Q8WXD9 1431 aa19.3■□□□□ 0.68
SNRNP200-202ENST00000429650 FAM50AQ14320 339 aaKnown RBP19.3■□□□□ 0.68
SNRNP200-202ENST00000429650 WDR97A6NE52 1622 aa19.29■□□□□ 0.68
SNRNP200-202ENST00000429650 ERICH6Q7L0X2 663 aa19.29■□□□□ 0.68
SNRNP200-202ENST00000429650 ATP1B4Q9UN42 357 aaPredicted RBP19.28■□□□□ 0.68
SNRNP200-202ENST00000429650 LAMC3Q9Y6N6 1575 aa19.26■□□□□ 0.67
SNRNP200-202ENST00000429650 URB2Q14146 1524 aaKnown RBP19.26■□□□□ 0.67
SNRNP200-202ENST00000429650 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.23■□□□□ 0.67
SNRNP200-202ENST00000429650 FMN1Q68DA7 1419 aa19.22■□□□□ 0.67
SNRNP200-202ENST00000429650 ABCA5Q8WWZ7 1642 aa19.21■□□□□ 0.67
SNRNP200-202ENST00000429650 SNAPC4Q5SXM2 1469 aa19.21■□□□□ 0.67
SNRNP200-202ENST00000429650 SAMD9Q5K651 1589 aa19.17■□□□□ 0.66
SNRNP200-202ENST00000429650 SIN3AQ96ST3 1273 aa19.17■□□□□ 0.66
SNRNP200-202ENST00000429650 DNAJC5BQ9UF47 199 aa19.16■□□□□ 0.66
SNRNP200-202ENST00000429650 TDRD9Q8NDG6 1382 aaKnown RBP19.16■□□□□ 0.66
SNRNP200-202ENST00000429650 FGD6Q6ZV73 1430 aa19.16■□□□□ 0.66
SNRNP200-202ENST00000429650 GAPVD1Q14C86 1478 aa19.15■□□□□ 0.66
SNRNP200-202ENST00000429650 LRRIQ1Q96JM4 1722 aa19.13■□□□□ 0.65
SNRNP200-202ENST00000429650 TIMELESSQ9UNS1 1208 aa19.12■□□□□ 0.65
SNRNP200-202ENST00000429650 PDS5BQ9NTI5 1447 aa19.11■□□□□ 0.65
SNRNP200-202ENST00000429650 MTUS2Q5JR59 1369 aa19.11■□□□□ 0.65
SNRNP200-202ENST00000429650 GRIN2BQ13224 1484 aa19.1■□□□□ 0.65
SNRNP200-202ENST00000429650 DAXXQ9UER7 740 aaPredicted RBP19.09■□□□□ 0.65
SNRNP200-202ENST00000429650 THOC2Q8NI27 1593 aaKnown RBP19.08■□□□□ 0.65
SNRNP200-202ENST00000429650 KIF21AQ7Z4S6 1674 aa19.07■□□□□ 0.64
SNRNP200-202ENST00000429650 NCOA2Q15596 1464 aa19.05■□□□□ 0.64
SNRNP200-202ENST00000429650 PTPRKQ15262 1439 aa19.05■□□□□ 0.64
SNRNP200-202ENST00000429650 CCDC18Q5T9S5 1454 aa19.05■□□□□ 0.64
SNRNP200-202ENST00000429650 HFM1A2PYH4 1435 aa19.05■□□□□ 0.64
SNRNP200-202ENST00000429650 TARBP1Q13395 1621 aaKnown RBP19.04■□□□□ 0.64
SNRNP200-202ENST00000429650 MYOM3Q5VTT5 1437 aa19.03■□□□□ 0.64
SNRNP200-202ENST00000429650 SUPT6HQ7KZ85 1726 aaKnown RBP19.03■□□□□ 0.64
SNRNP200-202ENST00000429650 PPP1R15AO75807 674 aaPredicted RBP19.03■□□□□ 0.64
SNRNP200-202ENST00000429650 EHBP1L1Q8N3D4 1523 aa19.03■□□□□ 0.64
SNRNP200-202ENST00000429650 PTPN23Q9H3S7 1636 aa19.03■□□□□ 0.64
SNRNP200-202ENST00000429650 KCNH8Q96L42 1107 aa19.01■□□□□ 0.63
SNRNP200-202ENST00000429650 UACAQ9BZF9 1416 aa19■□□□□ 0.63
SNRNP200-202ENST00000429650 DDX10Q13206 875 aaKnown RBP19■□□□□ 0.63
SNRNP200-202ENST00000429650 SUPT16HQ9Y5B9 1047 aaKnown RBP18.99■□□□□ 0.63
SNRNP200-202ENST00000429650 NAIPQ13075 1403 aa18.98■□□□□ 0.63
SNRNP200-202ENST00000429650 UGGT2Q9NYU1 1516 aa18.98■□□□□ 0.63
SNRNP200-202ENST00000429650 ARHGEF11O15085 1522 aa18.97■□□□□ 0.63
SNRNP200-202ENST00000429650 MAGI3Q5TCQ9 1506 aa18.96■□□□□ 0.63
SNRNP200-202ENST00000429650 PBRM1Q86U86 1689 aa18.96■□□□□ 0.63
SNRNP200-202ENST00000429650 TONSLQ96HA7 1378 aa18.95■□□□□ 0.62
SNRNP200-202ENST00000429650 HECW1Q76N89 1606 aa18.92■□□□□ 0.62
SNRNP200-202ENST00000429650 HIRIP3Q9BW71 556 aaPredicted RBP18.91■□□□□ 0.62
SNRNP200-202ENST00000429650 IQGAP2Q13576 1575 aa18.91■□□□□ 0.62
SNRNP200-202ENST00000429650 ADAMTS12P58397 1594 aa18.9■□□□□ 0.62
SNRNP200-202ENST00000429650 TCOF1Q13428 1488 aaKnown RBP18.9■□□□□ 0.62
SNRNP200-202ENST00000429650 EPRSP07814 1512 aaKnown RBP18.87■□□□□ 0.61
SNRNP200-202ENST00000429650 GCC2Q8IWJ2 1684 aa18.86■□□□□ 0.61
SNRNP200-202ENST00000429650 KDM5BQ9UGL1 1544 aa18.85■□□□□ 0.61
SNRNP200-202ENST00000429650 CCER2I3L3R5 266 aa18.83■□□□□ 0.61
SNRNP200-202ENST00000429650 MRC2Q9UBG0 1479 aa18.83■□□□□ 0.61
SNRNP200-202ENST00000429650 WDR62O43379 1518 aa18.83■□□□□ 0.6
SNRNP200-202ENST00000429650 CDK13Q14004 1512 aaKnown RBP18.83■□□□□ 0.6
SNRNP200-202ENST00000429650 AKNAQ7Z591 1439 aa18.82■□□□□ 0.6
SNRNP200-202ENST00000429650 RRP7BPQ9NSQ0 103 aa18.82■□□□□ 0.6
SNRNP200-202ENST00000429650 ANP32CO43423 234 aa18.81■□□□□ 0.6
SNRNP200-202ENST00000429650 ARID3CA6NKF2 412 aa18.81■□□□□ 0.6
SNRNP200-202ENST00000429650 MIA2Q96PC5 1412 aa18.8■□□□□ 0.6
SNRNP200-202ENST00000429650 CHIC2Q9UKJ5 165 aa18.8■□□□□ 0.6
SNRNP200-202ENST00000429650 DENND4BO75064 1496 aaPredicted RBP18.79■□□□□ 0.6
SNRNP200-202ENST00000429650 KDM6BO15054 1643 aa18.78■□□□□ 0.6
SNRNP200-202ENST00000429650 IFT140Q96RY7 1462 aa18.73■□□□□ 0.59
SNRNP200-202ENST00000429650 TRIM52Q96A61 297 aa18.73■□□□□ 0.59
SNRNP200-202ENST00000429650 ZNF608Q9ULD9 1512 aaPredicted RBP18.73■□□□□ 0.59
SNRNP200-202ENST00000429650 KIAA0556O60303 1618 aa18.71■□□□□ 0.59
SNRNP200-202ENST00000429650 KIAA0586Q9BVV6 1533 aa18.7■□□□□ 0.58
SNRNP200-202ENST00000429650 DISP1Q96F81 1524 aa18.7■□□□□ 0.58
SNRNP200-202ENST00000429650 MPHOSPH9Q99550 1183 aa18.69■□□□□ 0.58
SNRNP200-202ENST00000429650 DAPK1P53355 1430 aa18.67■□□□□ 0.58
SNRNP200-202ENST00000429650 NUP153P49790 1475 aaKnown RBP18.66■□□□□ 0.58
SNRNP200-202ENST00000429650 FKBP8Q14318 412 aa18.66■□□□□ 0.58
SNRNP200-202ENST00000429650 ROCK1Q13464 1354 aa18.66■□□□□ 0.58
SNRNP200-202ENST00000429650 DNMT1P26358 1616 aaKnown RBP18.66■□□□□ 0.58
SNRNP200-202ENST00000429650 HSPA5P11021 654 aaKnown RBP18.65■□□□□ 0.58
SNRNP200-202ENST00000429650 TSHZ2Q9NRE2 1034 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms