RNA–Protein interactions for RNA: ENST00000429436.6

MARK3-205, Transcript of microtubule affinity regulating kinase 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene MARK3, Length 3,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-205ENST00000429436 CLSPNQ9HAW4 1339 aa20.98■□□□□ 0.95
MARK3-205ENST00000429436 RAB3GAP2Q9H2M9 1393 aa20.96■□□□□ 0.95
MARK3-205ENST00000429436 ARHGAP35Q9NRY4 1499 aa20.93■□□□□ 0.94
MARK3-205ENST00000429436 RBM19Q9Y4C8 960 aaKnown RBP20.93■□□□□ 0.94
MARK3-205ENST00000429436 CUX2O14529 1486 aa20.92■□□□□ 0.94
MARK3-205ENST00000429436 ERICH3Q5RHP9 1530 aa20.89■□□□□ 0.93
MARK3-205ENST00000429436 RRBP1Q9P2E9 1410 aaKnown RBP20.88■□□□□ 0.93
MARK3-205ENST00000429436 BIVM-ERCC5R4GMW8 1640 aa20.85■□□□□ 0.93
MARK3-205ENST00000429436 TRIM52Q96A61 297 aa20.85■□□□□ 0.93
MARK3-205ENST00000429436 SALL2Q9Y467 1007 aaPredicted RBP20.85■□□□□ 0.93
MARK3-205ENST00000429436 IGF1RP08069 1367 aa20.84■□□□□ 0.93
MARK3-205ENST00000429436 CARMIL1Q5VZK9 1371 aa20.83■□□□□ 0.93
MARK3-205ENST00000429436 PHLDB1Q86UU1 1377 aa20.8■□□□□ 0.92
MARK3-205ENST00000429436 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.79■□□□□ 0.92
MARK3-205ENST00000429436 DAXXQ9UER7 740 aaPredicted RBP20.79■□□□□ 0.92
MARK3-205ENST00000429436 NCAPD3P42695 1498 aa20.79■□□□□ 0.92
MARK3-205ENST00000429436 MSH5O43196 834 aa20.77■□□□□ 0.91
MARK3-205ENST00000429436 SETD5Q9C0A6 1442 aa20.76■□□□□ 0.91
MARK3-205ENST00000429436 CFTRP13569 1480 aa20.75■□□□□ 0.91
MARK3-205ENST00000429436 NEFLP07196 543 aa20.74■□□□□ 0.91
MARK3-205ENST00000429436 UBE2Q2Q8WVN8 375 aa20.72■□□□□ 0.91
MARK3-205ENST00000429436 PODXL2Q9NZ53 605 aa20.71■□□□□ 0.91
MARK3-205ENST00000429436 FHOD3Q2V2M9 1422 aa20.7■□□□□ 0.9
MARK3-205ENST00000429436 ARID3CA6NKF2 412 aa20.69■□□□□ 0.9
MARK3-205ENST00000429436 MAPKBP1O60336 1514 aa20.67■□□□□ 0.9
MARK3-205ENST00000429436 WDR97A6NE52 1622 aa20.67■□□□□ 0.9
MARK3-205ENST00000429436 FGD5Q6ZNL6 1462 aa20.67■□□□□ 0.9
MARK3-205ENST00000429436 ANP32CO43423 234 aa20.66■□□□□ 0.9
MARK3-205ENST00000429436 LRRC9Q6ZRR7 1453 aa20.65■□□□□ 0.9
MARK3-205ENST00000429436 IRX6P78412 446 aaPredicted RBP20.65■□□□□ 0.9
MARK3-205ENST00000429436 CADPSQ9ULU8 1353 aa20.64■□□□□ 0.89
MARK3-205ENST00000429436 HMGXB3Q12766 1538 aa20.63■□□□□ 0.89
MARK3-205ENST00000429436 PKNOX2Q96KN3 472 aa20.63■□□□□ 0.89
MARK3-205ENST00000429436 CHIC2Q9UKJ5 165 aa20.63■□□□□ 0.89
MARK3-205ENST00000429436 TIAM1Q13009 1591 aa20.62■□□□□ 0.89
MARK3-205ENST00000429436 RAD54L2Q9Y4B4 1467 aa20.61■□□□□ 0.89
MARK3-205ENST00000429436 PPP1R15AO75807 674 aaPredicted RBP20.61■□□□□ 0.89
MARK3-205ENST00000429436 CNGB1Q14028 1251 aaPredicted RBP20.59■□□□□ 0.89
MARK3-205ENST00000429436 TONSLQ96HA7 1378 aa20.59■□□□□ 0.89
MARK3-205ENST00000429436 RTN4Q9NQC3 1192 aaKnown RBP20.58■□□□□ 0.88
MARK3-205ENST00000429436 NBR1Q14596 966 aa20.57■□□□□ 0.88
MARK3-205ENST00000429436 DEKP35659 375 aaKnown RBP20.57■□□□□ 0.88
MARK3-205ENST00000429436 RRP7BPQ9NSQ0 103 aa20.56■□□□□ 0.88
MARK3-205ENST00000429436 FHAD1B1AJZ9 1412 aa20.55■□□□□ 0.88
MARK3-205ENST00000429436 MTUS2Q5JR59 1369 aa20.54■□□□□ 0.88
MARK3-205ENST00000429436 PCF11O94913 1555 aaKnown RBP20.49■□□□□ 0.87
MARK3-205ENST00000429436 HNRNPUQ00839 825 aaKnown RBP eCLIP20.49■□□□□ 0.87
MARK3-205ENST00000429436 TDRD9Q8NDG6 1382 aaKnown RBP20.47■□□□□ 0.87
MARK3-205ENST00000429436 FANCD2Q9BXW9 1451 aa20.46■□□□□ 0.87
MARK3-205ENST00000429436 FOXD1Q16676 465 aa20.45■□□□□ 0.86
MARK3-205ENST00000429436 NESP48681 1621 aa20.44■□□□□ 0.86
MARK3-205ENST00000429436 CDK11AQ9UQ88 783 aaPredicted RBP20.4■□□□□ 0.86
MARK3-205ENST00000429436 SENP3-EIF4A1A0A087X0R7 540 aa20.38■□□□□ 0.85
MARK3-205ENST00000429436 PTPRKQ15262 1439 aa20.38■□□□□ 0.85
MARK3-205ENST00000429436 TIMELESSQ9UNS1 1208 aa20.37■□□□□ 0.85
MARK3-205ENST00000429436 POLR3GLQ9BT43 218 aa20.37■□□□□ 0.85
MARK3-205ENST00000429436 FGD6Q6ZV73 1430 aa20.37■□□□□ 0.85
MARK3-205ENST00000429436 CCDC18Q5T9S5 1454 aa20.36■□□□□ 0.85
MARK3-205ENST00000429436 CCER2I3L3R5 266 aa20.36■□□□□ 0.85
MARK3-205ENST00000429436 MAP3K1Q13233 1512 aa20.35■□□□□ 0.85
MARK3-205ENST00000429436 FAM9BQ8IZU0 186 aa20.34■□□□□ 0.85
MARK3-205ENST00000429436 POLA1P09884 1462 aaPredicted RBP20.34■□□□□ 0.85
MARK3-205ENST00000429436 HSPA5P11021 654 aaKnown RBP20.34■□□□□ 0.85
MARK3-205ENST00000429436 DNAJC5BQ9UF47 199 aa20.33■□□□□ 0.85
MARK3-205ENST00000429436 CASKIN1Q8WXD9 1431 aa20.33■□□□□ 0.84
MARK3-205ENST00000429436 CCDC184Q52MB2 194 aa20.29■□□□□ 0.84
MARK3-205ENST00000429436 FYCO1Q9BQS8 1478 aa20.29■□□□□ 0.84
MARK3-205ENST00000429436 FMN1Q68DA7 1419 aa20.28■□□□□ 0.84
MARK3-205ENST00000429436 AQRO60306 1485 aaKnown RBP eCLIP20.28■□□□□ 0.845e-8■■■□□ 18.4
MARK3-205ENST00000429436 CC2D2AQ9P2K1 1620 aa20.27■□□□□ 0.84
MARK3-205ENST00000429436 TOPBP1Q92547 1522 aa20.27■□□□□ 0.84
MARK3-205ENST00000429436 ZNF326Q5BKZ1 582 aaKnown RBP20.26■□□□□ 0.83
MARK3-205ENST00000429436 WASHC2AQ641Q2 1341 aa20.24■□□□□ 0.83
MARK3-205ENST00000429436 UACAQ9BZF9 1416 aa20.23■□□□□ 0.83
MARK3-205ENST00000429436 NCOA2Q15596 1464 aa20.23■□□□□ 0.83
MARK3-205ENST00000429436 CFAP43Q8NDM7 1665 aa20.23■□□□□ 0.83
MARK3-205ENST00000429436 EIF4G2P78344 907 aaKnown RBP eCLIP20.23■□□□□ 0.831e-6■□□□□ 9.8
MARK3-205ENST00000429436 IL27Q8NEV9 243 aa20.23■□□□□ 0.83
MARK3-205ENST00000429436 L3MBTL2Q969R5 705 aa20.22■□□□□ 0.83
MARK3-205ENST00000429436 NAIPQ13075 1403 aa20.22■□□□□ 0.83
MARK3-205ENST00000429436 FANCIQ9NVI1 1328 aa20.21■□□□□ 0.83
MARK3-205ENST00000429436 ABCA10Q8WWZ4 1543 aa20.21■□□□□ 0.83
MARK3-205ENST00000429436 HFM1A2PYH4 1435 aa20.2■□□□□ 0.82
MARK3-205ENST00000429436 MPHOSPH9Q99550 1183 aa20.19■□□□□ 0.82
MARK3-205ENST00000429436 C11orf95C9JLR9 678 aaPredicted RBP20.19■□□□□ 0.82
MARK3-205ENST00000429436 MRS2Q9HD23 443 aa20.19■□□□□ 0.82
MARK3-205ENST00000429436 MYOM3Q5VTT5 1437 aa20.18■□□□□ 0.82
MARK3-205ENST00000429436 A0A0U1RQG5 324 aaPredicted RBP20.18■□□□□ 0.82
MARK3-205ENST00000429436 PAK3O75914 559 aaPredicted RBP20.18■□□□□ 0.82
MARK3-205ENST00000429436 PRDM2Q13029 1718 aa20.17■□□□□ 0.82
MARK3-205ENST00000429436 DNMBPQ6XZF7 1577 aa20.17■□□□□ 0.82
MARK3-205ENST00000429436 B4GALNT3Q6L9W6 998 aa20.15■□□□□ 0.82
MARK3-205ENST00000429436 EFCAB5A4FU69 1503 aa20.14■□□□□ 0.82
MARK3-205ENST00000429436 ZNF777Q9ULD5 760 aaPredicted RBP20.14■□□□□ 0.82
MARK3-205ENST00000429436 ZNF644Q9H582 1327 aaPredicted RBP20.14■□□□□ 0.81
MARK3-205ENST00000429436 SNAPC4Q5SXM2 1469 aa20.14■□□□□ 0.81
MARK3-205ENST00000429436 PTPN23Q9H3S7 1636 aa20.13■□□□□ 0.81
MARK3-205ENST00000429436 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.13■□□□□ 0.81
MARK3-205ENST00000429436 GAPVD1Q14C86 1478 aa20.13■□□□□ 0.81
MARK3-205ENST00000429436 SLC4A1APQ9BWU0 796 aaKnown RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms