RNA–Protein interactions for RNA: ENST00000429163.6

PDE6B-202, Transcript of phosphodiesterase 6B, humanhuman

TSL 2 BASIC

Gene PDE6B, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-202ENST00000429163 LRRC9Q6ZRR7 1453 aa27.49■■□□□ 1.99
PDE6B-202ENST00000429163 RAD54L2Q9Y4B4 1467 aa27.49■■□□□ 1.99
PDE6B-202ENST00000429163 NESP48681 1621 aa27.47■■□□□ 1.99
PDE6B-202ENST00000429163 PDS5BQ9NTI5 1447 aa27.47■■□□□ 1.99
PDE6B-202ENST00000429163 CTTNBP2Q8WZ74 1663 aa27.46■■□□□ 1.99
PDE6B-202ENST00000429163 FYCO1Q9BQS8 1478 aa27.44■■□□□ 1.98
PDE6B-202ENST00000429163 URB2Q14146 1524 aaKnown RBP27.43■■□□□ 1.98
PDE6B-202ENST00000429163 ABCA5Q8WWZ7 1642 aa27.41■■□□□ 1.98
PDE6B-202ENST00000429163 CENPBP07199 599 aaPredicted RBP27.41■■□□□ 1.98
PDE6B-202ENST00000429163 CASKIN1Q8WXD9 1431 aa27.38■■□□□ 1.97
PDE6B-202ENST00000429163 PCF11O94913 1555 aaKnown RBP27.38■■□□□ 1.97
PDE6B-202ENST00000429163 ACIN1Q9UKV3 1341 aaKnown RBP27.38■■□□□ 1.97
PDE6B-202ENST00000429163 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.35■■□□□ 1.97
PDE6B-202ENST00000429163 FMN1Q68DA7 1419 aa27.34■■□□□ 1.97
PDE6B-202ENST00000429163 SCAF1Q9H7N4 1312 aaKnown RBP27.33■■□□□ 1.97
PDE6B-202ENST00000429163 GAPVD1Q14C86 1478 aa27.28■■□□□ 1.96
PDE6B-202ENST00000429163 SAMD9Q5K651 1589 aa27.26■■□□□ 1.95
PDE6B-202ENST00000429163 PHLDB1Q86UU1 1377 aa27.24■■□□□ 1.95
PDE6B-202ENST00000429163 FHOD3Q2V2M9 1422 aa27.24■■□□□ 1.95
PDE6B-202ENST00000429163 THOC2Q8NI27 1593 aaKnown RBP27.23■■□□□ 1.95
PDE6B-202ENST00000429163 SETD5Q9C0A6 1442 aa27.22■■□□□ 1.95
PDE6B-202ENST00000429163 RAB3GAP2Q9H2M9 1393 aa27.2■■□□□ 1.94
PDE6B-202ENST00000429163 SNAPC4Q5SXM2 1469 aa27.19■■□□□ 1.94
PDE6B-202ENST00000429163 TARBP1Q13395 1621 aaKnown RBP27.19■■□□□ 1.94
PDE6B-202ENST00000429163 KIF21AQ7Z4S6 1674 aa27.18■■□□□ 1.94
PDE6B-202ENST00000429163 NEUROD1Q13562 356 aa27.17■■□□□ 1.94
PDE6B-202ENST00000429163 TDRD9Q8NDG6 1382 aaKnown RBP27.12■■□□□ 1.93
PDE6B-202ENST00000429163 MAPKBP1O60336 1514 aa27.1■■□□□ 1.93
PDE6B-202ENST00000429163 P3H3Q8IVL6 736 aa27.08■■□□□ 1.93
PDE6B-202ENST00000429163 TIMELESSQ9UNS1 1208 aa27.08■■□□□ 1.93
PDE6B-202ENST00000429163 GRIN2BQ13224 1484 aa27.06■■□□□ 1.92
PDE6B-202ENST00000429163 PELP1Q8IZL8 1130 aaKnown RBP27.04■■□□□ 1.92
PDE6B-202ENST00000429163 MIER1Q8N108 512 aa27.04■■□□□ 1.92
PDE6B-202ENST00000429163 FGD6Q6ZV73 1430 aa27.02■■□□□ 1.92
PDE6B-202ENST00000429163 PBRM1Q86U86 1689 aa27.02■■□□□ 1.92
PDE6B-202ENST00000429163 MRC2Q9UBG0 1479 aa27.02■■□□□ 1.92
PDE6B-202ENST00000429163 ITGAEP38570 1179 aa27.01■■□□□ 1.91
PDE6B-202ENST00000429163 EHBP1L1Q8N3D4 1523 aa27■■□□□ 1.91
PDE6B-202ENST00000429163 CCDC18Q5T9S5 1454 aa27■■□□□ 1.91
PDE6B-202ENST00000429163 FAM50AQ14320 339 aaKnown RBP26.99■■□□□ 1.91
PDE6B-202ENST00000429163 MTUS2Q5JR59 1369 aa26.98■■□□□ 1.91
PDE6B-202ENST00000429163 ADAMTS12P58397 1594 aa26.96■■□□□ 1.91
PDE6B-202ENST00000429163 ATP1B4Q9UN42 357 aaPredicted RBP26.96■■□□□ 1.91
PDE6B-202ENST00000429163 SUPT6HQ7KZ85 1726 aaKnown RBP26.95■■□□□ 1.91
PDE6B-202ENST00000429163 LRRIQ1Q96JM4 1722 aa26.93■■□□□ 1.9
PDE6B-202ENST00000429163 IQGAP2Q13576 1575 aa26.92■■□□□ 1.9
PDE6B-202ENST00000429163 ARHGEF11O15085 1522 aa26.91■■□□□ 1.9
PDE6B-202ENST00000429163 MYOM3Q5VTT5 1437 aa26.91■■□□□ 1.9
PDE6B-202ENST00000429163 HECW1Q76N89 1606 aa26.9■■□□□ 1.9
PDE6B-202ENST00000429163 NCOA2Q15596 1464 aa26.89■■□□□ 1.9
PDE6B-202ENST00000429163 IFT140Q96RY7 1462 aa26.89■■□□□ 1.9
PDE6B-202ENST00000429163 HFM1A2PYH4 1435 aa26.89■■□□□ 1.89
PDE6B-202ENST00000429163 GTF3C3Q9Y5Q9 886 aa26.88■■□□□ 1.89
PDE6B-202ENST00000429163 UGGT2Q9NYU1 1516 aa26.86■■□□□ 1.89
PDE6B-202ENST00000429163 WDR62O43379 1518 aa26.85■■□□□ 1.89
PDE6B-202ENST00000429163 TCOF1Q13428 1488 aaKnown RBP26.8■■□□□ 1.88
PDE6B-202ENST00000429163 UACAQ9BZF9 1416 aa26.79■■□□□ 1.88
PDE6B-202ENST00000429163 PTPN23Q9H3S7 1636 aa26.78■■□□□ 1.88
PDE6B-202ENST00000429163 AKNAQ7Z591 1439 aa26.77■■□□□ 1.88
PDE6B-202ENST00000429163 MIA2Q96PC5 1412 aa26.75■■□□□ 1.87
PDE6B-202ENST00000429163 EPRSP07814 1512 aaKnown RBP26.74■■□□□ 1.87
PDE6B-202ENST00000429163 KIAA0586Q9BVV6 1533 aa26.73■■□□□ 1.87
PDE6B-202ENST00000429163 NAIPQ13075 1403 aa26.71■■□□□ 1.87
PDE6B-202ENST00000429163 PTPRKQ15262 1439 aa26.71■■□□□ 1.87
PDE6B-202ENST00000429163 MAGI3Q5TCQ9 1506 aa26.7■■□□□ 1.87
PDE6B-202ENST00000429163 ERCC6Q03468 1493 aa26.69■■□□□ 1.86
PDE6B-202ENST00000429163 YTHDC1Q96MU7 727 aaKnown RBP26.68■■□□□ 1.86
PDE6B-202ENST00000429163 PPP1R15AO75807 674 aaPredicted RBP26.65■■□□□ 1.86
PDE6B-202ENST00000429163 GCC2Q8IWJ2 1684 aa26.65■■□□□ 1.86
PDE6B-202ENST00000429163 SIN3AQ96ST3 1273 aa26.63■■□□□ 1.85
PDE6B-202ENST00000429163 KIAA0556O60303 1618 aa26.62■■□□□ 1.85
PDE6B-202ENST00000429163 ZNF608Q9ULD9 1512 aaPredicted RBP26.6■■□□□ 1.85
PDE6B-202ENST00000429163 MAGI1Q96QZ7 1491 aaPredicted RBP26.6■■□□□ 1.85
PDE6B-202ENST00000429163 GRIN2AQ12879 1464 aa26.59■■□□□ 1.85
PDE6B-202ENST00000429163 DISP1Q96F81 1524 aa26.57■■□□□ 1.84
PDE6B-202ENST00000429163 EIF4G3O43432 1585 aaKnown RBP26.57■■□□□ 1.84
PDE6B-202ENST00000429163 TONSLQ96HA7 1378 aa26.55■■□□□ 1.84
PDE6B-202ENST00000429163 CDK13Q14004 1512 aaKnown RBP26.52■■□□□ 1.84
PDE6B-202ENST00000429163 ROCK1Q13464 1354 aa26.51■■□□□ 1.83
PDE6B-202ENST00000429163 RAPGEF6Q8TEU7 1601 aa26.5■■□□□ 1.83
PDE6B-202ENST00000429163 SYNJ2O15056 1496 aa26.47■■□□□ 1.83
PDE6B-202ENST00000429163 CDK11AQ9UQ88 783 aaPredicted RBP26.47■■□□□ 1.83
PDE6B-202ENST00000429163 NUP153P49790 1475 aaKnown RBP26.46■■□□□ 1.83
PDE6B-202ENST00000429163 DNMT1P26358 1616 aaKnown RBP26.42■■□□□ 1.82
PDE6B-202ENST00000429163 KDM5BQ9UGL1 1544 aa26.38■■□□□ 1.81
PDE6B-202ENST00000429163 DAPK1P53355 1430 aa26.38■■□□□ 1.81
PDE6B-202ENST00000429163 NUP160Q12769 1436 aa26.37■■□□□ 1.81
PDE6B-202ENST00000429163 CCER2I3L3R5 266 aa26.36■■□□□ 1.81
PDE6B-202ENST00000429163 ADCY10Q96PN6 1610 aa26.35■■□□□ 1.81
PDE6B-202ENST00000429163 TROQ12816 1431 aaPredicted RBP26.35■■□□□ 1.81
PDE6B-202ENST00000429163 CEP170Q5SW79 1584 aa26.35■■□□□ 1.81
PDE6B-202ENST00000429163 CARMIL2Q6F5E8 1435 aa26.35■■□□□ 1.81
PDE6B-202ENST00000429163 ITSN2Q9NZM3 1697 aa26.34■■□□□ 1.81
PDE6B-202ENST00000429163 DENND4BO75064 1496 aaPredicted RBP26.33■■□□□ 1.81
PDE6B-202ENST00000429163 RRP7BPQ9NSQ0 103 aa26.32■■□□□ 1.8
PDE6B-202ENST00000429163 DDX10Q13206 875 aaKnown RBP26.31■■□□□ 1.8
PDE6B-202ENST00000429163 ABCC5O15440 1437 aa26.31■■□□□ 1.8
PDE6B-202ENST00000429163 CHMP7Q8WUX9 453 aaPredicted RBP26.29■■□□□ 1.8
PDE6B-202ENST00000429163 KDM6BO15054 1643 aa26.27■■□□□ 1.8
PDE6B-202ENST00000429163 MPHOSPH9Q99550 1183 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms