RNA–Protein interactions for RNA: ENST00000428870.6

KDM4C-205, Transcript of lysine demethylase 4C, humanhuman

TSL 2 BASIC

Gene KDM4C, Length 3,039 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4C-205ENST00000428870 FHAD1B1AJZ9 1412 aa12.16□□□□□ -0.46
KDM4C-205ENST00000428870 EFCAB5A4FU69 1503 aa12.16□□□□□ -0.46
KDM4C-205ENST00000428870 ZNF608Q9ULD9 1512 aaPredicted RBP12.14□□□□□ -0.47
KDM4C-205ENST00000428870 PCGF6Q9BYE7 350 aa12.12□□□□□ -0.47
KDM4C-205ENST00000428870 CARMIL1Q5VZK9 1371 aa12.12□□□□□ -0.47
KDM4C-205ENST00000428870 SYNJ2O15056 1496 aa12.11□□□□□ -0.47
KDM4C-205ENST00000428870 CHD1O14646 1710 aa12.1□□□□□ -0.47
KDM4C-205ENST00000428870 SHROOM2Q13796 1616 aa12.1□□□□□ -0.47
KDM4C-205ENST00000428870 UGGT2Q9NYU1 1516 aa12.08□□□□□ -0.48
KDM4C-205ENST00000428870 SNAPC4Q5SXM2 1469 aa12.08□□□□□ -0.48
KDM4C-205ENST00000428870 SCAF1Q9H7N4 1312 aaKnown RBP12.07□□□□□ -0.48
KDM4C-205ENST00000428870 GRIN2AQ12879 1464 aa12.07□□□□□ -0.48
KDM4C-205ENST00000428870 IQGAP2Q13576 1575 aa12.07□□□□□ -0.48
KDM4C-205ENST00000428870 MYT1Q01538 1121 aa12.07□□□□□ -0.48
KDM4C-205ENST00000428870 CEP162Q5TB80 1403 aa12.06□□□□□ -0.48
KDM4C-205ENST00000428870 NUP160Q12769 1436 aa12.06□□□□□ -0.48
KDM4C-205ENST00000428870 AQRO60306 1485 aaKnown RBP eCLIP12.06□□□□□ -0.483e-7■■■■■ 36.6
KDM4C-205ENST00000428870 CEP170Q5SW79 1584 aa12.06□□□□□ -0.48
KDM4C-205ENST00000428870 TDRD9Q8NDG6 1382 aaKnown RBP12.04□□□□□ -0.48
KDM4C-205ENST00000428870 MAP3K1Q13233 1512 aa12.03□□□□□ -0.48
KDM4C-205ENST00000428870 CFAP43Q8NDM7 1665 aa12.02□□□□□ -0.48
KDM4C-205ENST00000428870 CLASP1Q7Z460 1538 aa12.02□□□□□ -0.49
KDM4C-205ENST00000428870 KIAA0586Q9BVV6 1533 aa12.02□□□□□ -0.49
KDM4C-205ENST00000428870 ARAP1Q96P48 1450 aa12.01□□□□□ -0.49
KDM4C-205ENST00000428870 ARHGAP35Q9NRY4 1499 aa11.99□□□□□ -0.49
KDM4C-205ENST00000428870 KIAA0556O60303 1618 aa11.99□□□□□ -0.49
KDM4C-205ENST00000428870 CLIP1P30622 1438 aa11.97□□□□□ -0.49
KDM4C-205ENST00000428870 VPS8Q8N3P4 1428 aa11.96□□□□□ -0.5
KDM4C-205ENST00000428870 LRRIQ1Q96JM4 1722 aa11.96□□□□□ -0.5
KDM4C-205ENST00000428870 LOC105371045A0A1W2PR82 267 aa11.95□□□□□ -0.5
KDM4C-205ENST00000428870 FYCO1Q9BQS8 1478 aa11.92□□□□□ -0.5
KDM4C-205ENST00000428870 DISP1Q96F81 1524 aa11.91□□□□□ -0.5
KDM4C-205ENST00000428870 FAM9AQ8IZU1 332 aaPredicted RBP11.91□□□□□ -0.5
KDM4C-205ENST00000428870 PCF11O94913 1555 aaKnown RBP11.9□□□□□ -0.5
KDM4C-205ENST00000428870 HECW1Q76N89 1606 aa11.89□□□□□ -0.51
KDM4C-205ENST00000428870 TIMELESSQ9UNS1 1208 aa11.87□□□□□ -0.51
KDM4C-205ENST00000428870 CASKIN1Q8WXD9 1431 aa11.87□□□□□ -0.51
KDM4C-205ENST00000428870 TIAM1Q13009 1591 aa11.87□□□□□ -0.51
KDM4C-205ENST00000428870 FMN1Q68DA7 1419 aa11.86□□□□□ -0.51
KDM4C-205ENST00000428870 RAPGEF6Q8TEU7 1601 aa11.85□□□□□ -0.51
KDM4C-205ENST00000428870 ABCA8O94911 1581 aa11.85□□□□□ -0.51
KDM4C-205ENST00000428870 ADCY10Q96PN6 1610 aa11.85□□□□□ -0.51
KDM4C-205ENST00000428870 ARXQ96QS3 562 aa11.84□□□□□ -0.51
KDM4C-205ENST00000428870 CCDC18Q5T9S5 1454 aa11.83□□□□□ -0.52
KDM4C-205ENST00000428870 UBTFP17480 764 aaKnown RBP11.82□□□□□ -0.52
KDM4C-205ENST00000428870 ARHGEF11O15085 1522 aa11.78□□□□□ -0.52
KDM4C-205ENST00000428870 UHRF1BP1LA0JNW5 1464 aa11.77□□□□□ -0.52
KDM4C-205ENST00000428870 TRIM26Q12899 539 aaPredicted RBP11.77□□□□□ -0.53
KDM4C-205ENST00000428870 CARMIL2Q6F5E8 1435 aa11.77□□□□□ -0.53
KDM4C-205ENST00000428870 EHBP1L1Q8N3D4 1523 aa11.76□□□□□ -0.53
KDM4C-205ENST00000428870 SLC4A1APQ9BWU0 796 aaKnown RBP11.75□□□□□ -0.53
KDM4C-205ENST00000428870 TAOK2Q9UL54 1235 aa11.75□□□□□ -0.53
KDM4C-205ENST00000428870 SUPT6HQ7KZ85 1726 aaKnown RBP11.74□□□□□ -0.53
KDM4C-205ENST00000428870 FHOD3Q2V2M9 1422 aa11.74□□□□□ -0.53
KDM4C-205ENST00000428870 CHMP7Q8WUX9 453 aaPredicted RBP11.73□□□□□ -0.53
KDM4C-205ENST00000428870 DNAJC5Q9H3Z4 198 aa11.72□□□□□ -0.53
KDM4C-205ENST00000428870 LRRC9Q6ZRR7 1453 aa11.72□□□□□ -0.53
KDM4C-205ENST00000428870 EPRSP07814 1512 aaKnown RBP11.71□□□□□ -0.54
KDM4C-205ENST00000428870 ABCC2Q92887 1545 aa11.7□□□□□ -0.54
KDM4C-205ENST00000428870 NUP153P49790 1475 aaKnown RBP11.7□□□□□ -0.54
KDM4C-205ENST00000428870 ITSN2Q9NZM3 1697 aa11.69□□□□□ -0.54
KDM4C-205ENST00000428870 APLP2Q06481 763 aa11.68□□□□□ -0.54
KDM4C-205ENST00000428870 PRG4Q92954 1404 aaPredicted RBP11.68□□□□□ -0.54
KDM4C-205ENST00000428870 ERCC6L2Q5T890 1561 aa11.68□□□□□ -0.54
KDM4C-205ENST00000428870 KDM5BQ9UGL1 1544 aa11.67□□□□□ -0.54
KDM4C-205ENST00000428870 TULP1O00294 542 aaPredicted RBP11.67□□□□□ -0.54
KDM4C-205ENST00000428870 MAGI3Q5TCQ9 1506 aa11.66□□□□□ -0.54
KDM4C-205ENST00000428870 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.66□□□□□ -0.54
KDM4C-205ENST00000428870 ZCCHC11Q5TAX3 1644 aaKnown RBP11.66□□□□□ -0.54
KDM4C-205ENST00000428870 RRBP1Q9P2E9 1410 aaKnown RBP11.66□□□□□ -0.54
KDM4C-205ENST00000428870 JPH4Q96JJ6 628 aa11.65□□□□□ -0.55
KDM4C-205ENST00000428870 GTF3C3Q9Y5Q9 886 aa11.63□□□□□ -0.55
KDM4C-205ENST00000428870 TCOF1Q13428 1488 aaKnown RBP11.62□□□□□ -0.55
KDM4C-205ENST00000428870 CROCC2H7BZ55 1655 aa11.61□□□□□ -0.55
KDM4C-205ENST00000428870 CDC42BPAQ5VT25 1732 aa11.61□□□□□ -0.55
KDM4C-205ENST00000428870 KIF14Q15058 1648 aa11.61□□□□□ -0.55
KDM4C-205ENST00000428870 ARAP3Q8WWN8 1544 aa11.61□□□□□ -0.55
KDM4C-205ENST00000428870 UACAQ9BZF9 1416 aa11.61□□□□□ -0.55
KDM4C-205ENST00000428870 PREX2Q70Z35 1606 aa11.6□□□□□ -0.55
KDM4C-205ENST00000428870 NEUROD1Q13562 356 aa11.6□□□□□ -0.55
KDM4C-205ENST00000428870 PLB1Q6P1J6 1458 aa11.59□□□□□ -0.55
KDM4C-205ENST00000428870 RIMBP3CA6NJZ7 1639 aa11.58□□□□□ -0.56
KDM4C-205ENST00000428870 RIMBP3BA6NNM3 1639 aa11.58□□□□□ -0.56
KDM4C-205ENST00000428870 RIMBP3Q9UFD9 1639 aa11.58□□□□□ -0.56
KDM4C-205ENST00000428870 CDK13Q14004 1512 aaKnown RBP11.58□□□□□ -0.56
KDM4C-205ENST00000428870 BCL11AQ9H165 835 aa11.58□□□□□ -0.56
KDM4C-205ENST00000428870 MYO5CQ9NQX4 1742 aa11.58□□□□□ -0.56
KDM4C-205ENST00000428870 ATP10BO94823 1461 aa11.58□□□□□ -0.56
KDM4C-205ENST00000428870 PTPRGP23470 1445 aa11.57□□□□□ -0.56
KDM4C-205ENST00000428870 ABCC10Q5T3U5 1492 aa11.56□□□□□ -0.56
KDM4C-205ENST00000428870 TROQ12816 1431 aaPredicted RBP11.56□□□□□ -0.56
KDM4C-205ENST00000428870 MIA2Q96PC5 1412 aa11.56□□□□□ -0.56
KDM4C-205ENST00000428870 ABCA9Q8IUA7 1624 aa11.55□□□□□ -0.56
KDM4C-205ENST00000428870 PTPN23Q9H3S7 1636 aa11.55□□□□□ -0.56
KDM4C-205ENST00000428870 ADGBQ8N7X0 1667 aa11.55□□□□□ -0.56
KDM4C-205ENST00000428870 CDC42BPBQ9Y5S2 1711 aa11.55□□□□□ -0.56
KDM4C-205ENST00000428870 NCOA2Q15596 1464 aa11.55□□□□□ -0.56
KDM4C-205ENST00000428870 ZEB1P37275 1124 aaPredicted RBP11.55□□□□□ -0.56
KDM4C-205ENST00000428870 BCANQ96GW7 911 aa11.55□□□□□ -0.56
KDM4C-205ENST00000428870 ACIN1Q9UKV3 1341 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms