RNA–Protein interactions for RNA: ENST00000425230.2

SHC1P1-201, Transcript of SHC adaptor protein 1 pseudogene 1, humanhuman

BASIC

Gene SHC1P1, Length 1,745 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P1-201ENST00000425230 KIF21BO75037 1637 aa24.43■■□□□ 1.5
SHC1P1-201ENST00000425230 SHROOM2Q13796 1616 aa24.42■■□□□ 1.5
SHC1P1-201ENST00000425230 RIMBP3CA6NJZ7 1639 aa24.4■■□□□ 1.5
SHC1P1-201ENST00000425230 RIMBP3BA6NNM3 1639 aa24.4■■□□□ 1.5
SHC1P1-201ENST00000425230 RIMBP3Q9UFD9 1639 aa24.4■■□□□ 1.5
SHC1P1-201ENST00000425230 JPH4Q96JJ6 628 aa24.39■■□□□ 1.5
SHC1P1-201ENST00000425230 CTTNBP2Q8WZ74 1663 aa24.38■■□□□ 1.49
SHC1P1-201ENST00000425230 IQGAP2Q13576 1575 aa24.38■■□□□ 1.49
SHC1P1-201ENST00000425230 PRG4Q92954 1404 aaPredicted RBP24.32■■□□□ 1.48
SHC1P1-201ENST00000425230 GOLGA3Q08378 1498 aa24.3■■□□□ 1.48
SHC1P1-201ENST00000425230 ERCC6L2Q5T890 1561 aa24.29■■□□□ 1.48
SHC1P1-201ENST00000425230 EHMT2Q96KQ7 1210 aa24.26■■□□□ 1.47
SHC1P1-201ENST00000425230 UGGT2Q9NYU1 1516 aa24.25■■□□□ 1.47
SHC1P1-201ENST00000425230 ARAP1Q96P48 1450 aa24.24■■□□□ 1.47
SHC1P1-201ENST00000425230 UBTFP17480 764 aaKnown RBP24.22■■□□□ 1.47
SHC1P1-201ENST00000425230 CARMIL2Q6F5E8 1435 aa24.2■■□□□ 1.47
SHC1P1-201ENST00000425230 CYB5RLQ6IPT4 315 aa24.19■■□□□ 1.46
SHC1P1-201ENST00000425230 DISP1Q96F81 1524 aa24.17■■□□□ 1.46
SHC1P1-201ENST00000425230 KIAA0556O60303 1618 aa24.14■■□□□ 1.45
SHC1P1-201ENST00000425230 TNIKQ9UKE5 1360 aa24.1■■□□□ 1.45
SHC1P1-201ENST00000425230 RANGAP1P46060 587 aaPredicted RBP24.07■■□□□ 1.44
SHC1P1-201ENST00000425230 PTPRGP23470 1445 aa24.07■■□□□ 1.44
SHC1P1-201ENST00000425230 SAMD9Q5K651 1589 aa24.06■■□□□ 1.44
SHC1P1-201ENST00000425230 TTBK1Q5TCY1 1321 aaPredicted RBP24.03■■□□□ 1.44
SHC1P1-201ENST00000425230 EFCAB5A4FU69 1503 aa24.01■■□□□ 1.43
SHC1P1-201ENST00000425230 P3H3Q8IVL6 736 aa24■■□□□ 1.43
SHC1P1-201ENST00000425230 LOC105371045A0A1W2PR82 267 aa23.97■■□□□ 1.43
SHC1P1-201ENST00000425230 FHOD3Q2V2M9 1422 aa23.93■■□□□ 1.42
SHC1P1-201ENST00000425230 ARHGAP35Q9NRY4 1499 aa23.92■■□□□ 1.42
SHC1P1-201ENST00000425230 ADCY10Q96PN6 1610 aa23.92■■□□□ 1.42
SHC1P1-201ENST00000425230 UACAQ9BZF9 1416 aa23.91■■□□□ 1.42
SHC1P1-201ENST00000425230 UHRF1BP1LA0JNW5 1464 aa23.88■■□□□ 1.41
SHC1P1-201ENST00000425230 PLB1Q6P1J6 1458 aa23.87■■□□□ 1.41
SHC1P1-201ENST00000425230 CLIP1P30622 1438 aa23.87■■□□□ 1.41
SHC1P1-201ENST00000425230 ABCC2Q92887 1545 aa23.87■■□□□ 1.41
SHC1P1-201ENST00000425230 ABCA8O94911 1581 aa23.85■■□□□ 1.41
SHC1P1-201ENST00000425230 NPM1P06748 294 aaKnown RBP eCLIP23.83■■□□□ 1.41
SHC1P1-201ENST00000425230 CEP162Q5TB80 1403 aa23.82■■□□□ 1.4
SHC1P1-201ENST00000425230 FMN1Q68DA7 1419 aa23.79■■□□□ 1.4
SHC1P1-201ENST00000425230 RAPGEF6Q8TEU7 1601 aa23.79■■□□□ 1.4
SHC1P1-201ENST00000425230 KDM5BQ9UGL1 1544 aa23.76■■□□□ 1.39
SHC1P1-201ENST00000425230 ZCCHC11Q5TAX3 1644 aaKnown RBP23.72■■□□□ 1.39
SHC1P1-201ENST00000425230 MAPKBP1O60336 1514 aa23.72■■□□□ 1.39
SHC1P1-201ENST00000425230 NUP153P49790 1475 aaKnown RBP23.69■■□□□ 1.38
SHC1P1-201ENST00000425230 ATP10BO94823 1461 aa23.66■■□□□ 1.38
SHC1P1-201ENST00000425230 ARID3CA6NKF2 412 aa23.65■■□□□ 1.38
SHC1P1-201ENST00000425230 HECW1Q76N89 1606 aa23.65■■□□□ 1.38
SHC1P1-201ENST00000425230 ASXL2Q76L83 1435 aa23.64■■□□□ 1.37
SHC1P1-201ENST00000425230 ATP1B4Q9UN42 357 aaPredicted RBP23.63■■□□□ 1.37
SHC1P1-201ENST00000425230 PCF11O94913 1555 aaKnown RBP23.62■■□□□ 1.37
SHC1P1-201ENST00000425230 TRHP20396 242 aaPredicted RBP23.62■■□□□ 1.37
SHC1P1-201ENST00000425230 CASKIN1Q8WXD9 1431 aa23.62■■□□□ 1.37
SHC1P1-201ENST00000425230 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.59■■□□□ 1.37
SHC1P1-201ENST00000425230 HNRNPUL2Q1KMD3 747 aaKnown RBP23.59■■□□□ 1.37
SHC1P1-201ENST00000425230 FYCO1Q9BQS8 1478 aa23.59■■□□□ 1.37
SHC1P1-201ENST00000425230 ABCC10Q5T3U5 1492 aa23.57■■□□□ 1.36
SHC1P1-201ENST00000425230 EPRSP07814 1512 aaKnown RBP23.57■■□□□ 1.36
SHC1P1-201ENST00000425230 WDR7Q9Y4E6 1490 aa23.56■■□□□ 1.36
SHC1P1-201ENST00000425230 CDK13Q14004 1512 aaKnown RBP23.55■■□□□ 1.36
SHC1P1-201ENST00000425230 LRRIQ1Q96JM4 1722 aa23.54■■□□□ 1.36
SHC1P1-201ENST00000425230 DIP2BQ9P265 1576 aa23.54■■□□□ 1.36
SHC1P1-201ENST00000425230 KIF13AQ9H1H9 1805 aa23.54■■□□□ 1.36
SHC1P1-201ENST00000425230 VPS8Q8N3P4 1428 aa23.52■■□□□ 1.36
SHC1P1-201ENST00000425230 CCDC18Q5T9S5 1454 aa23.51■■□□□ 1.35
SHC1P1-201ENST00000425230 FAM69CQ0P6D2 419 aa23.51■■□□□ 1.35
SHC1P1-201ENST00000425230 PLEKHD1A6NEE1 506 aa23.49■■□□□ 1.35
SHC1P1-201ENST00000425230 CDK11AQ9UQ88 783 aaPredicted RBP23.47■■□□□ 1.35
SHC1P1-201ENST00000425230 GLI2P10070 1586 aa23.47■■□□□ 1.35
SHC1P1-201ENST00000425230 KCNH8Q96L42 1107 aa23.46■■□□□ 1.35
SHC1P1-201ENST00000425230 MAP3K4Q9Y6R4 1608 aa23.38■■□□□ 1.33
SHC1P1-201ENST00000425230 TROQ12816 1431 aaPredicted RBP23.37■■□□□ 1.33
SHC1P1-201ENST00000425230 CFAP43Q8NDM7 1665 aa23.36■■□□□ 1.33
SHC1P1-201ENST00000425230 TSPOAP1O95153 1857 aa23.35■■□□□ 1.33
SHC1P1-201ENST00000425230 ABCA9Q8IUA7 1624 aa23.35■■□□□ 1.33
SHC1P1-201ENST00000425230 MAGI3Q5TCQ9 1506 aa23.34■■□□□ 1.33
SHC1P1-201ENST00000425230 KIF14Q15058 1648 aa23.32■■□□□ 1.32
SHC1P1-201ENST00000425230 CD109Q6YHK3 1445 aa23.32■■□□□ 1.32
SHC1P1-201ENST00000425230 TIAM1Q13009 1591 aa23.32■■□□□ 1.32
SHC1P1-201ENST00000425230 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.3■■□□□ 1.32
SHC1P1-201ENST00000425230 MAP3K1Q13233 1512 aa23.3■■□□□ 1.32
SHC1P1-201ENST00000425230 MTUS2Q5JR59 1369 aa23.3■■□□□ 1.32
SHC1P1-201ENST00000425230 PPRC1Q5VV67 1664 aaKnown RBP23.28■■□□□ 1.32
SHC1P1-201ENST00000425230 TTC37Q6PGP7 1564 aa23.27■■□□□ 1.32
SHC1P1-201ENST00000425230 APLP2Q06481 763 aa23.27■■□□□ 1.32
SHC1P1-201ENST00000425230 EHBP1L1Q8N3D4 1523 aa23.26■■□□□ 1.31
SHC1P1-201ENST00000425230 TEX14Q8IWB6 1497 aa23.26■■□□□ 1.31
SHC1P1-201ENST00000425230 LRRC9Q6ZRR7 1453 aa23.21■■□□□ 1.31
SHC1P1-201ENST00000425230 MYO5CQ9NQX4 1742 aa23.2■■□□□ 1.3
SHC1P1-201ENST00000425230 PLCH2O75038 1416 aa23.17■■□□□ 1.3
SHC1P1-201ENST00000425230 KANK4Q5T7N3 995 aaPredicted RBP23.17■■□□□ 1.3
SHC1P1-201ENST00000425230 SUPT6HQ7KZ85 1726 aaKnown RBP23.16■■□□□ 1.3
SHC1P1-201ENST00000425230 ARAP3Q8WWN8 1544 aa23.14■■□□□ 1.3
SHC1P1-201ENST00000425230 FANCAO15360 1455 aa23.13■■□□□ 1.29
SHC1P1-201ENST00000425230 NEO1Q92859 1461 aa23.13■■□□□ 1.29
SHC1P1-201ENST00000425230 CFAP74Q9C0B2 1584 aa23.13■■□□□ 1.29
SHC1P1-201ENST00000425230 CDC42BPAQ5VT25 1732 aa23.12■■□□□ 1.29
SHC1P1-201ENST00000425230 PREX2Q70Z35 1606 aa23.12■■□□□ 1.29
SHC1P1-201ENST00000425230 PHLDB1Q86UU1 1377 aa23.11■■□□□ 1.29
SHC1P1-201ENST00000425230 KDM6BO15054 1643 aa23.11■■□□□ 1.29
SHC1P1-201ENST00000425230 NCOA2Q15596 1464 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms