RNA–Protein interactions for RNA: ENST00000424805.1

PNMA3-201, Transcript of PNMA family member 3, humanhuman

TSL 5

Gene PNMA3, Length 3,158 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3-201ENST00000424805 ANP32CO43423 234 aa19.28■□□□□ 0.68
PNMA3-201ENST00000424805 NCAPD3P42695 1498 aa19.28■□□□□ 0.68
PNMA3-201ENST00000424805 WDR97A6NE52 1622 aa19.26■□□□□ 0.67
PNMA3-201ENST00000424805 TOP2BQ02880 1626 aa19.25■□□□□ 0.67
PNMA3-201ENST00000424805 MAPKBP1O60336 1514 aa19.24■□□□□ 0.67
PNMA3-201ENST00000424805 ARHGAP35Q9NRY4 1499 aa19.22■□□□□ 0.67
PNMA3-201ENST00000424805 PPP1R15AO75807 674 aaPredicted RBP19.22■□□□□ 0.67
PNMA3-201ENST00000424805 KIF27Q86VH2 1401 aa19.2■□□□□ 0.66
PNMA3-201ENST00000424805 SETD5Q9C0A6 1442 aa19.2■□□□□ 0.66
PNMA3-201ENST00000424805 CUX2O14529 1486 aa19.2■□□□□ 0.66
PNMA3-201ENST00000424805 ERICH3Q5RHP9 1530 aa19.2■□□□□ 0.66
PNMA3-201ENST00000424805 HNRNPUQ00839 825 aaKnown RBP eCLIP19.16■□□□□ 0.66
PNMA3-201ENST00000424805 PHLDB1Q86UU1 1377 aa19.15■□□□□ 0.66
PNMA3-201ENST00000424805 MSH5O43196 834 aa19.14■□□□□ 0.66
PNMA3-201ENST00000424805 ERICH6Q7L0X2 663 aa19.13■□□□□ 0.65
PNMA3-201ENST00000424805 CUX1P39880 1505 aa19.11■□□□□ 0.65
PNMA3-201ENST00000424805 CCER2I3L3R5 266 aa19.08■□□□□ 0.64
PNMA3-201ENST00000424805 BIVM-ERCC5R4GMW8 1640 aa19.07■□□□□ 0.64
PNMA3-201ENST00000424805 TONSLQ96HA7 1378 aa19.07■□□□□ 0.64
PNMA3-201ENST00000424805 CDK11AQ9UQ88 783 aaPredicted RBP19.05■□□□□ 0.64
PNMA3-201ENST00000424805 CNGB1Q14028 1251 aaPredicted RBP19.02■□□□□ 0.64
PNMA3-201ENST00000424805 LRRC9Q6ZRR7 1453 aa19.02■□□□□ 0.63
PNMA3-201ENST00000424805 TIAM1Q13009 1591 aa19.01■□□□□ 0.63
PNMA3-201ENST00000424805 IGF1RP08069 1367 aa18.99■□□□□ 0.63
PNMA3-201ENST00000424805 CARMIL1Q5VZK9 1371 aa18.97■□□□□ 0.63
PNMA3-201ENST00000424805 LAMC3Q9Y6N6 1575 aa18.95■□□□□ 0.62
PNMA3-201ENST00000424805 FAM9BQ8IZU0 186 aa18.94■□□□□ 0.62
PNMA3-201ENST00000424805 TIMELESSQ9UNS1 1208 aa18.93■□□□□ 0.62
PNMA3-201ENST00000424805 FHOD3Q2V2M9 1422 aa18.92■□□□□ 0.62
PNMA3-201ENST00000424805 B4GALNT3Q6L9W6 998 aa18.92■□□□□ 0.62
PNMA3-201ENST00000424805 SENP3-EIF4A1A0A087X0R7 540 aa18.91■□□□□ 0.62
PNMA3-201ENST00000424805 CCDC184Q52MB2 194 aa18.91■□□□□ 0.62
PNMA3-201ENST00000424805 THOC2Q8NI27 1593 aaKnown RBP18.89■□□□□ 0.61
PNMA3-201ENST00000424805 CHIC2Q9UKJ5 165 aa18.89■□□□□ 0.61
PNMA3-201ENST00000424805 RRP7BPQ9NSQ0 103 aa18.85■□□□□ 0.61
PNMA3-201ENST00000424805 FHAD1B1AJZ9 1412 aa18.85■□□□□ 0.61
PNMA3-201ENST00000424805 HSPA5P11021 654 aaKnown RBP18.85■□□□□ 0.61
PNMA3-201ENST00000424805 NBR1Q14596 966 aa18.84■□□□□ 0.61
PNMA3-201ENST00000424805 FANCIQ9NVI1 1328 aa18.84■□□□□ 0.61
PNMA3-201ENST00000424805 PCF11O94913 1555 aaKnown RBP18.84■□□□□ 0.61
PNMA3-201ENST00000424805 WASHC2AQ641Q2 1341 aa18.83■□□□□ 0.6
PNMA3-201ENST00000424805 CCDC18Q5T9S5 1454 aa18.82■□□□□ 0.6
PNMA3-201ENST00000424805 DNAJC5Q9H3Z4 198 aa18.8■□□□□ 0.6
PNMA3-201ENST00000424805 MTUS2Q5JR59 1369 aa18.8■□□□□ 0.6
PNMA3-201ENST00000424805 CFTRP13569 1480 aa18.8■□□□□ 0.6
PNMA3-201ENST00000424805 MRS2Q9HD23 443 aa18.8■□□□□ 0.6
PNMA3-201ENST00000424805 FOXD1Q16676 465 aa18.79■□□□□ 0.6
PNMA3-201ENST00000424805 PPP4R2Q9NY27 417 aa18.79■□□□□ 0.6
PNMA3-201ENST00000424805 POLR3GLQ9BT43 218 aa18.78■□□□□ 0.6
PNMA3-201ENST00000424805 ARID3CA6NKF2 412 aa18.78■□□□□ 0.6
PNMA3-201ENST00000424805 MAP3K1Q13233 1512 aa18.77■□□□□ 0.6
PNMA3-201ENST00000424805 PTPRKQ15262 1439 aa18.77■□□□□ 0.6
PNMA3-201ENST00000424805 FGD5Q6ZNL6 1462 aa18.76■□□□□ 0.59
PNMA3-201ENST00000424805 DEKP35659 375 aaKnown RBP18.75■□□□□ 0.59
PNMA3-201ENST00000424805 FGD6Q6ZV73 1430 aa18.74■□□□□ 0.59
PNMA3-201ENST00000424805 EIF4G2P78344 907 aaKnown RBP eCLIP18.74■□□□□ 0.59
PNMA3-201ENST00000424805 AQRO60306 1485 aaKnown RBP eCLIP18.73■□□□□ 0.59
PNMA3-201ENST00000424805 C11orf95C9JLR9 678 aaPredicted RBP18.73■□□□□ 0.59
PNMA3-201ENST00000424805 UACAQ9BZF9 1416 aa18.71■□□□□ 0.59
PNMA3-201ENST00000424805 PAK3O75914 559 aaPredicted RBP18.69■□□□□ 0.58
PNMA3-201ENST00000424805 PRKRIP1Q9H875 184 aaPredicted RBP18.67■□□□□ 0.58
PNMA3-201ENST00000424805 L3MBTL2Q969R5 705 aa18.67■□□□□ 0.58
PNMA3-201ENST00000424805 CFAP43Q8NDM7 1665 aa18.66■□□□□ 0.58
PNMA3-201ENST00000424805 RAD54L2Q9Y4B4 1467 aa18.66■□□□□ 0.58
PNMA3-201ENST00000424805 PRDM2Q13029 1718 aa18.65■□□□□ 0.58
PNMA3-201ENST00000424805 HFM1A2PYH4 1435 aa18.65■□□□□ 0.58
PNMA3-201ENST00000424805 NAIPQ13075 1403 aa18.65■□□□□ 0.58
PNMA3-201ENST00000424805 KIF21AQ7Z4S6 1674 aa18.65■□□□□ 0.58
PNMA3-201ENST00000424805 ERCC6Q03468 1493 aa18.64■□□□□ 0.58
PNMA3-201ENST00000424805 NOP58Q9Y2X3 529 aaKnown RBP18.64■□□□□ 0.57
PNMA3-201ENST00000424805 CASKIN1Q8WXD9 1431 aa18.64■□□□□ 0.57
PNMA3-201ENST00000424805 FYCO1Q9BQS8 1478 aa18.63■□□□□ 0.57
PNMA3-201ENST00000424805 ZNF326Q5BKZ1 582 aaKnown RBP18.62■□□□□ 0.57
PNMA3-201ENST00000424805 WDR62O43379 1518 aa18.62■□□□□ 0.57
PNMA3-201ENST00000424805 PTPN23Q9H3S7 1636 aa18.61■□□□□ 0.57
PNMA3-201ENST00000424805 CADPSQ9ULU8 1353 aa18.61■□□□□ 0.57
PNMA3-201ENST00000424805 FMN1Q68DA7 1419 aa18.6■□□□□ 0.57
PNMA3-201ENST00000424805 CCDC136Q96JN2 1154 aa18.59■□□□□ 0.57
PNMA3-201ENST00000424805 CNTLNQ9NXG0 1405 aa18.59■□□□□ 0.57
PNMA3-201ENST00000424805 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.58■□□□□ 0.57
PNMA3-201ENST00000424805 MPHOSPH9Q99550 1183 aa18.58■□□□□ 0.56
PNMA3-201ENST00000424805 AKNAQ7Z591 1439 aa18.58■□□□□ 0.56
PNMA3-201ENST00000424805 ZBED9Q6R2W3 1325 aa18.58■□□□□ 0.56
PNMA3-201ENST00000424805 ERICH6BQ5W0A0 696 aa18.57■□□□□ 0.56
PNMA3-201ENST00000424805 NCOA2Q15596 1464 aa18.57■□□□□ 0.56
PNMA3-201ENST00000424805 PDS5BQ9NTI5 1447 aa18.57■□□□□ 0.56
PNMA3-201ENST00000424805 NPM2Q86SE8 214 aaKnown RBP18.56■□□□□ 0.56
PNMA3-201ENST00000424805 CCDC7Q96M83 1385 aa18.56■□□□□ 0.56
PNMA3-201ENST00000424805 NBPF8Q3BBV2 869 aa18.55■□□□□ 0.56
PNMA3-201ENST00000424805 KDM5BQ9UGL1 1544 aa18.55■□□□□ 0.56
PNMA3-201ENST00000424805 MYOM3Q5VTT5 1437 aa18.54■□□□□ 0.56
PNMA3-201ENST00000424805 ANP32AP39687 249 aaKnown RBP18.52■□□□□ 0.56
PNMA3-201ENST00000424805 KIF7Q2M1P5 1343 aa18.52■□□□□ 0.55
PNMA3-201ENST00000424805 SALL2Q9Y467 1007 aaPredicted RBP18.52■□□□□ 0.55
PNMA3-201ENST00000424805 NESP48681 1621 aa18.51■□□□□ 0.55
PNMA3-201ENST00000424805 RTL5Q5HYW3 569 aaPredicted RBP18.5■□□□□ 0.55
PNMA3-201ENST00000424805 TDRD9Q8NDG6 1382 aaKnown RBP18.5■□□□□ 0.55
PNMA3-201ENST00000424805 MRC2Q9UBG0 1479 aa18.48■□□□□ 0.55
PNMA3-201ENST00000424805 ZBTB47Q9UFB7 747 aaPredicted RBP18.48■□□□□ 0.55
PNMA3-201ENST00000424805 MYT1LQ9UL68 1186 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms