RNA–Protein interactions for RNA: ENST00000424805.1

PNMA3-201, Transcript of PNMA family member 3, humanhuman

TSL 5

Gene PNMA3, Length 3,158 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3-201ENST00000424805 NISCHQ9Y2I1 1504 aa26.28■■□□□ 1.8
PNMA3-201ENST00000424805 SHROOM4Q9ULL8 1493 aa23.6■■□□□ 1.37
PNMA3-201ENST00000424805 SUPT5HO00267 1087 aaKnown RBP23.4■■□□□ 1.34
PNMA3-201ENST00000424805 HRCP23327 699 aa22.83■■□□□ 1.25
PNMA3-201ENST00000424805 PCGF6Q9BYE7 350 aa22.79■■□□□ 1.24
PNMA3-201ENST00000424805 PPARGC1BQ86YN6 1023 aaKnown RBP22.67■■□□□ 1.22
PNMA3-201ENST00000424805 MYO15BQ96JP2 1530 aa22.67■■□□□ 1.22
PNMA3-201ENST00000424805 DCAF8L2P0C7V8 631 aa22.63■■□□□ 1.21
PNMA3-201ENST00000424805 CHIC1Q5VXU3 224 aa22.63■■□□□ 1.21
PNMA3-201ENST00000424805 CCDC180Q9P1Z9 1646 aa22.46■■□□□ 1.19
PNMA3-201ENST00000424805 LOC105371045A0A1W2PR82 267 aa22.3■■□□□ 1.16
PNMA3-201ENST00000424805 ZCCHC6Q5VYS8 1495 aaKnown RBP22.25■■□□□ 1.15
PNMA3-201ENST00000424805 TRIM26Q12899 539 aaPredicted RBP21.89■■□□□ 1.1
PNMA3-201ENST00000424805 DCAF1Q9Y4B6 1507 aa21.87■■□□□ 1.09
PNMA3-201ENST00000424805 EHMT2Q96KQ7 1210 aa21.85■■□□□ 1.09
PNMA3-201ENST00000424805 FAM9AQ8IZU1 332 aaPredicted RBP21.74■■□□□ 1.07
PNMA3-201ENST00000424805 TRIM41Q8WV44 630 aa21.52■■□□□ 1.04
PNMA3-201ENST00000424805 SCAF1Q9H7N4 1312 aaKnown RBP21.52■■□□□ 1.04
PNMA3-201ENST00000424805 ABCC9O60706 1549 aa21.51■■□□□ 1.03
PNMA3-201ENST00000424805 ZEB1P37275 1124 aaPredicted RBP21.5■■□□□ 1.03
PNMA3-201ENST00000424805 PELP1Q8IZL8 1130 aaKnown RBP21.37■■□□□ 1.01
PNMA3-201ENST00000424805 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.24■□□□□ 0.99
PNMA3-201ENST00000424805 TTBK1Q5TCY1 1321 aaPredicted RBP21.22■□□□□ 0.99
PNMA3-201ENST00000424805 CCER1Q8TC90 406 aaPredicted RBP21.16■□□□□ 0.98
PNMA3-201ENST00000424805 RSF1Q96T23 1441 aaPredicted RBP21.15■□□□□ 0.98
PNMA3-201ENST00000424805 NEUROD1Q13562 356 aa21.09■□□□□ 0.97
PNMA3-201ENST00000424805 RB1CC1Q8TDY2 1594 aa21.07■□□□□ 0.96
PNMA3-201ENST00000424805 SCRIBQ14160 1630 aa21.06■□□□□ 0.96
PNMA3-201ENST00000424805 NACADO15069 1562 aa21.03■□□□□ 0.96
PNMA3-201ENST00000424805 ACIN1Q9UKV3 1341 aaKnown RBP21.03■□□□□ 0.96
PNMA3-201ENST00000424805 GTF3C3Q9Y5Q9 886 aa20.99■□□□□ 0.95
PNMA3-201ENST00000424805 DIEXFQ68CQ4 756 aaKnown RBP20.94■□□□□ 0.94
PNMA3-201ENST00000424805 CENPBP07199 599 aaPredicted RBP20.84■□□□□ 0.93
PNMA3-201ENST00000424805 YTHDC1Q96MU7 727 aaKnown RBP20.83■□□□□ 0.93
PNMA3-201ENST00000424805 CECR2Q9BXF3 1484 aa20.75■□□□□ 0.91
PNMA3-201ENST00000424805 UNC13AQ9UPW8 1703 aa20.67■□□□□ 0.9
PNMA3-201ENST00000424805 MROH2BQ7Z745 1585 aa20.62■□□□□ 0.89
PNMA3-201ENST00000424805 UBTFP17480 764 aaKnown RBP20.55■□□□□ 0.88
PNMA3-201ENST00000424805 WIZO95785 1651 aa20.54■□□□□ 0.88
PNMA3-201ENST00000424805 ZNF316A6NFI3 1004 aaPredicted RBP20.52■□□□□ 0.88
PNMA3-201ENST00000424805 HNRNPUL2Q1KMD3 747 aaKnown RBP20.5■□□□□ 0.87
PNMA3-201ENST00000424805 MIER1Q8N108 512 aa20.46■□□□□ 0.87
PNMA3-201ENST00000424805 CEP162Q5TB80 1403 aa20.44■□□□□ 0.86
PNMA3-201ENST00000424805 BICRAQ9NZM4 1560 aa20.44■□□□□ 0.86
PNMA3-201ENST00000424805 ABCC8Q09428 1581 aa20.43■□□□□ 0.86
PNMA3-201ENST00000424805 CCDC88BA6NC98 1476 aa20.41■□□□□ 0.86
PNMA3-201ENST00000424805 RANGAP1P46060 587 aaPredicted RBP20.4■□□□□ 0.86
PNMA3-201ENST00000424805 SOGA1O94964 1423 aa20.38■□□□□ 0.85
PNMA3-201ENST00000424805 MYT1Q01538 1121 aa20.34■□□□□ 0.85
PNMA3-201ENST00000424805 CSRNP3Q8WYN3 585 aa20.3■□□□□ 0.84
PNMA3-201ENST00000424805 WRNQ14191 1432 aaPredicted RBP eCLIP20.27■□□□□ 0.84
PNMA3-201ENST00000424805 RUSC2Q8N2Y8 1516 aa20.27■□□□□ 0.83
PNMA3-201ENST00000424805 TNIKQ9UKE5 1360 aa20.22■□□□□ 0.83
PNMA3-201ENST00000424805 BAZ1AQ9NRL2 1556 aaPredicted RBP20.2■□□□□ 0.82
PNMA3-201ENST00000424805 EIF4G1Q04637 1599 aaKnown RBP20.15■□□□□ 0.82
PNMA3-201ENST00000424805 APLP2Q06481 763 aa20.14■□□□□ 0.81
PNMA3-201ENST00000424805 DNAJC5BQ9UF47 199 aa20.11■□□□□ 0.81
PNMA3-201ENST00000424805 GOLGA3Q08378 1498 aa20.03■□□□□ 0.8
PNMA3-201ENST00000424805 TOP2AP11388 1531 aaKnown RBP20■□□□□ 0.79
PNMA3-201ENST00000424805 SMARCA2P51531 1590 aa19.99■□□□□ 0.79
PNMA3-201ENST00000424805 CLIP1P30622 1438 aa19.97■□□□□ 0.79
PNMA3-201ENST00000424805 SUPT16HQ9Y5B9 1047 aaKnown RBP19.95■□□□□ 0.78
PNMA3-201ENST00000424805 PABPN1Q86U42 306 aaKnown RBP eCLIP19.94■□□□□ 0.78
PNMA3-201ENST00000424805 EEA1Q15075 1411 aa19.93■□□□□ 0.78
PNMA3-201ENST00000424805 ITGAEP38570 1179 aa19.89■□□□□ 0.77
PNMA3-201ENST00000424805 SMARCA4P51532 1647 aa19.88■□□□□ 0.77
PNMA3-201ENST00000424805 BCANQ96GW7 911 aa19.87■□□□□ 0.77
PNMA3-201ENST00000424805 CC2D2AQ9P2K1 1620 aa19.83■□□□□ 0.77
PNMA3-201ENST00000424805 CEP164Q9UPV0 1460 aa19.82■□□□□ 0.76
PNMA3-201ENST00000424805 VPS8Q8N3P4 1428 aa19.82■□□□□ 0.76
PNMA3-201ENST00000424805 KCNH8Q96L42 1107 aa19.81■□□□□ 0.76
PNMA3-201ENST00000424805 RAPGEF2Q9Y4G8 1499 aa19.78■□□□□ 0.76
PNMA3-201ENST00000424805 TSHZ2Q9NRE2 1034 aa19.77■□□□□ 0.75
PNMA3-201ENST00000424805 KANK4Q5T7N3 995 aaPredicted RBP19.75■□□□□ 0.75
PNMA3-201ENST00000424805 DHX57Q6P158 1386 aaKnown RBP19.75■□□□□ 0.75
PNMA3-201ENST00000424805 SYNJ1O43426 1573 aa19.71■□□□□ 0.75
PNMA3-201ENST00000424805 KIF21BO75037 1637 aa19.64■□□□□ 0.73
PNMA3-201ENST00000424805 FKBP8Q14318 412 aa19.62■□□□□ 0.73
PNMA3-201ENST00000424805 ANP32EQ9BTT0 268 aa19.61■□□□□ 0.73
PNMA3-201ENST00000424805 CLSPNQ9HAW4 1339 aa19.6■□□□□ 0.73
PNMA3-201ENST00000424805 HIRIP3Q9BW71 556 aaPredicted RBP19.6■□□□□ 0.73
PNMA3-201ENST00000424805 DDX10Q13206 875 aaKnown RBP19.59■□□□□ 0.73
PNMA3-201ENST00000424805 BAZ1BQ9UIG0 1483 aaKnown RBP19.52■□□□□ 0.72
PNMA3-201ENST00000424805 TRIM52Q96A61 297 aa19.52■□□□□ 0.71
PNMA3-201ENST00000424805 SIN3AQ96ST3 1273 aa19.49■□□□□ 0.71
PNMA3-201ENST00000424805 ARAP1Q96P48 1450 aa19.45■□□□□ 0.7
PNMA3-201ENST00000424805 ATP1B4Q9UN42 357 aaPredicted RBP19.45■□□□□ 0.7
PNMA3-201ENST00000424805 NEFLP07196 543 aa19.44■□□□□ 0.7
PNMA3-201ENST00000424805 CCNB3Q8WWL7 1395 aa19.44■□□□□ 0.7
PNMA3-201ENST00000424805 FAM50AQ14320 339 aaKnown RBP19.42■□□□□ 0.7
PNMA3-201ENST00000424805 BCL11AQ9H165 835 aa19.42■□□□□ 0.7
PNMA3-201ENST00000424805 RAB3GAP2Q9H2M9 1393 aa19.4■□□□□ 0.7
PNMA3-201ENST00000424805 RBM19Q9Y4C8 960 aaKnown RBP19.36■□□□□ 0.69
PNMA3-201ENST00000424805 RRBP1Q9P2E9 1410 aaKnown RBP19.34■□□□□ 0.69
PNMA3-201ENST00000424805 ATAD2BQ9ULI0 1458 aa19.34■□□□□ 0.69
PNMA3-201ENST00000424805 P3H3Q8IVL6 736 aa19.33■□□□□ 0.69
PNMA3-201ENST00000424805 IRX6P78412 446 aaPredicted RBP19.32■□□□□ 0.68
PNMA3-201ENST00000424805 HMGXB3Q12766 1538 aa19.3■□□□□ 0.68
PNMA3-201ENST00000424805 PRXQ9BXM0 1461 aa19.29■□□□□ 0.68
PNMA3-201ENST00000424805 PEG3Q9GZU2 1588 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms