RNA–Protein interactions for RNA: ENST00000424439.2

NHLRC4-201, Transcript of NHL repeat containing 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene NHLRC4, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC4-201ENST00000424439 THOC2Q8NI27 1593 aaKnown RBP33.57■■■□□ 2.96
NHLRC4-201ENST00000424439 FGD5Q6ZNL6 1462 aa33.52■■■□□ 2.96
NHLRC4-201ENST00000424439 MAPKBP1O60336 1514 aa33.5■■■□□ 2.95
NHLRC4-201ENST00000424439 TIAM1Q13009 1591 aa33.48■■■□□ 2.95
NHLRC4-201ENST00000424439 DNMBPQ6XZF7 1577 aa33.48■■■□□ 2.95
NHLRC4-201ENST00000424439 RAB3GAP2Q9H2M9 1393 aa33.45■■■□□ 2.94
NHLRC4-201ENST00000424439 TOPBP1Q92547 1522 aa33.37■■■□□ 2.93
NHLRC4-201ENST00000424439 SETD5Q9C0A6 1442 aa33.37■■■□□ 2.93
NHLRC4-201ENST00000424439 IGF1RP08069 1367 aa33.31■■■□□ 2.92
NHLRC4-201ENST00000424439 LRRC9Q6ZRR7 1453 aa33.31■■■□□ 2.92
NHLRC4-201ENST00000424439 MRC2Q9UBG0 1479 aa33.31■■■□□ 2.92
NHLRC4-201ENST00000424439 TIMELESSQ9UNS1 1208 aa33.3■■■□□ 2.92
NHLRC4-201ENST00000424439 TSHZ2Q9NRE2 1034 aa33.3■■■□□ 2.92
NHLRC4-201ENST00000424439 POLA1P09884 1462 aaPredicted RBP33.26■■■□□ 2.91
NHLRC4-201ENST00000424439 CFAP43Q8NDM7 1665 aa33.26■■■□□ 2.91
NHLRC4-201ENST00000424439 WDR62O43379 1518 aa33.23■■■□□ 2.91
NHLRC4-201ENST00000424439 ABCA10Q8WWZ4 1543 aa33.23■■■□□ 2.91
NHLRC4-201ENST00000424439 FHAD1B1AJZ9 1412 aa33.22■■■□□ 2.91
NHLRC4-201ENST00000424439 URB2Q14146 1524 aaKnown RBP33.21■■■□□ 2.91
NHLRC4-201ENST00000424439 ITGAEP38570 1179 aa33.19■■■□□ 2.9
NHLRC4-201ENST00000424439 WDR97A6NE52 1622 aa33.19■■■□□ 2.9
NHLRC4-201ENST00000424439 RAD54L2Q9Y4B4 1467 aa33.17■■■□□ 2.9
NHLRC4-201ENST00000424439 CARMIL1Q5VZK9 1371 aa33.16■■■□□ 2.9
NHLRC4-201ENST00000424439 PHLDB1Q86UU1 1377 aa33.15■■■□□ 2.9
NHLRC4-201ENST00000424439 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.14■■■□□ 2.91e-6■■■■■ 39.4
NHLRC4-201ENST00000424439 KCNH8Q96L42 1107 aa33.09■■■□□ 2.89
NHLRC4-201ENST00000424439 PPP1R15AO75807 674 aaPredicted RBP33.08■■■□□ 2.89
NHLRC4-201ENST00000424439 CCER2I3L3R5 266 aa33.05■■■□□ 2.88
NHLRC4-201ENST00000424439 PCF11O94913 1555 aaKnown RBP33.05■■■□□ 2.88
NHLRC4-201ENST00000424439 ANP32EQ9BTT0 268 aa33.02■■■□□ 2.88
NHLRC4-201ENST00000424439 AQRO60306 1485 aaKnown RBP eCLIP32.99■■■□□ 2.87
NHLRC4-201ENST00000424439 DDX10Q13206 875 aaKnown RBP32.99■■■□□ 2.87
NHLRC4-201ENST00000424439 FYCO1Q9BQS8 1478 aa32.99■■■□□ 2.87
NHLRC4-201ENST00000424439 CUL7Q14999 1698 aa32.98■■■□□ 2.87
NHLRC4-201ENST00000424439 EFCAB5A4FU69 1503 aa32.98■■■□□ 2.87
NHLRC4-201ENST00000424439 SIN3AQ96ST3 1273 aa32.97■■■□□ 2.87
NHLRC4-201ENST00000424439 FAM50AQ14320 339 aaKnown RBP32.93■■■□□ 2.86
NHLRC4-201ENST00000424439 ABCA5Q8WWZ7 1642 aa32.92■■■□□ 2.86
NHLRC4-201ENST00000424439 CASKIN1Q8WXD9 1431 aa32.91■■■□□ 2.86
NHLRC4-201ENST00000424439 FKBP8Q14318 412 aa32.89■■■□□ 2.86
NHLRC4-201ENST00000424439 DNAJC5Q9H3Z4 198 aa32.89■■■□□ 2.86
NHLRC4-201ENST00000424439 TARBP1Q13395 1621 aaKnown RBP32.83■■■□□ 2.85
NHLRC4-201ENST00000424439 ANP32CO43423 234 aa32.82■■■□□ 2.85
NHLRC4-201ENST00000424439 NEFLP07196 543 aa32.81■■■□□ 2.84
NHLRC4-201ENST00000424439 GAPVD1Q14C86 1478 aa32.8■■■□□ 2.84
NHLRC4-201ENST00000424439 TDRD9Q8NDG6 1382 aaKnown RBP32.77■■■□□ 2.84
NHLRC4-201ENST00000424439 FGD6Q6ZV73 1430 aa32.75■■■□□ 2.83
NHLRC4-201ENST00000424439 CTTNBP2Q8WZ74 1663 aa32.75■■■□□ 2.83
NHLRC4-201ENST00000424439 FHOD3Q2V2M9 1422 aa32.74■■■□□ 2.83
NHLRC4-201ENST00000424439 BCANQ96GW7 911 aa32.72■■■□□ 2.83
NHLRC4-201ENST00000424439 UACAQ9BZF9 1416 aa32.72■■■□□ 2.83
NHLRC4-201ENST00000424439 HFM1A2PYH4 1435 aa32.71■■■□□ 2.83
NHLRC4-201ENST00000424439 FMN1Q68DA7 1419 aa32.7■■■□□ 2.83
NHLRC4-201ENST00000424439 CCDC18Q5T9S5 1454 aa32.7■■■□□ 2.82
NHLRC4-201ENST00000424439 TONSLQ96HA7 1378 aa32.69■■■□□ 2.82
NHLRC4-201ENST00000424439 PTPN23Q9H3S7 1636 aa32.66■■■□□ 2.82
NHLRC4-201ENST00000424439 SNAPC4Q5SXM2 1469 aa32.64■■■□□ 2.82
NHLRC4-201ENST00000424439 P3H3Q8IVL6 736 aa32.62■■■□□ 2.81
NHLRC4-201ENST00000424439 IFT140Q96RY7 1462 aa32.61■■■□□ 2.81
NHLRC4-201ENST00000424439 RBM19Q9Y4C8 960 aaKnown RBP32.6■■■□□ 2.81
NHLRC4-201ENST00000424439 PBRM1Q86U86 1689 aa32.58■■■□□ 2.81
NHLRC4-201ENST00000424439 ATP1B4Q9UN42 357 aaPredicted RBP32.57■■■□□ 2.8
NHLRC4-201ENST00000424439 TRIM52Q96A61 297 aa32.56■■■□□ 2.8
NHLRC4-201ENST00000424439 KDM5BQ9UGL1 1544 aa32.54■■■□□ 2.8
NHLRC4-201ENST00000424439 PTPRKQ15262 1439 aa32.54■■■□□ 2.8
NHLRC4-201ENST00000424439 HIRIP3Q9BW71 556 aaPredicted RBP32.54■■■□□ 2.8
NHLRC4-201ENST00000424439 ZNF608Q9ULD9 1512 aaPredicted RBP32.53■■■□□ 2.8
NHLRC4-201ENST00000424439 SAMD9Q5K651 1589 aa32.53■■■□□ 2.8
NHLRC4-201ENST00000424439 NAIPQ13075 1403 aa32.52■■■□□ 2.8
NHLRC4-201ENST00000424439 MTUS2Q5JR59 1369 aa32.49■■■□□ 2.79
NHLRC4-201ENST00000424439 MYOM3Q5VTT5 1437 aa32.49■■■□□ 2.79
NHLRC4-201ENST00000424439 SUPT6HQ7KZ85 1726 aaKnown RBP32.46■■■□□ 2.79
NHLRC4-201ENST00000424439 LRRIQ1Q96JM4 1722 aa32.45■■■□□ 2.79
NHLRC4-201ENST00000424439 GRIN2BQ13224 1484 aa32.45■■■□□ 2.78
NHLRC4-201ENST00000424439 NCOA2Q15596 1464 aa32.45■■■□□ 2.78
NHLRC4-201ENST00000424439 EHBP1L1Q8N3D4 1523 aa32.44■■■□□ 2.78
NHLRC4-201ENST00000424439 ADAMTS12P58397 1594 aa32.44■■■□□ 2.78
NHLRC4-201ENST00000424439 EIF4G3O43432 1585 aaKnown RBP32.4■■■□□ 2.78
NHLRC4-201ENST00000424439 ARHGEF11O15085 1522 aa32.4■■■□□ 2.78
NHLRC4-201ENST00000424439 ERICH6BQ5W0A0 696 aa32.39■■■□□ 2.78
NHLRC4-201ENST00000424439 GCC2Q8IWJ2 1684 aa32.37■■■□□ 2.77
NHLRC4-201ENST00000424439 HECW1Q76N89 1606 aa32.36■■■□□ 2.77
NHLRC4-201ENST00000424439 UGGT2Q9NYU1 1516 aa32.36■■■□□ 2.77
NHLRC4-201ENST00000424439 AKNAQ7Z591 1439 aa32.35■■■□□ 2.77
NHLRC4-201ENST00000424439 TCOF1Q13428 1488 aaKnown RBP32.34■■■□□ 2.77
NHLRC4-201ENST00000424439 FANCIQ9NVI1 1328 aa32.3■■■□□ 2.76
NHLRC4-201ENST00000424439 HNRNPUQ00839 825 aaKnown RBP eCLIP32.27■■■□□ 2.76
NHLRC4-201ENST00000424439 WASHC2AQ641Q2 1341 aa32.24■■■□□ 2.75
NHLRC4-201ENST00000424439 IQGAP2Q13576 1575 aa32.22■■■□□ 2.75
NHLRC4-201ENST00000424439 DENND4BO75064 1496 aaPredicted RBP32.22■■■□□ 2.75
NHLRC4-201ENST00000424439 CNTLNQ9NXG0 1405 aa32.21■■■□□ 2.75
NHLRC4-201ENST00000424439 HSPA5P11021 654 aaKnown RBP32.2■■■□□ 2.75
NHLRC4-201ENST00000424439 CDK11AQ9UQ88 783 aaPredicted RBP32.2■■■□□ 2.75
NHLRC4-201ENST00000424439 OSCARQ8IYS5 282 aa32.19■■■□□ 2.74
NHLRC4-201ENST00000424439 EIF4G2P78344 907 aaKnown RBP eCLIP32.16■■■□□ 2.74
NHLRC4-201ENST00000424439 BCL11AQ9H165 835 aa32.16■■■□□ 2.74
NHLRC4-201ENST00000424439 MAGI3Q5TCQ9 1506 aa32.15■■■□□ 2.74
NHLRC4-201ENST00000424439 MSH5O43196 834 aa32.14■■■□□ 2.74
NHLRC4-201ENST00000424439 MIA2Q96PC5 1412 aa32.12■■■□□ 2.73
NHLRC4-201ENST00000424439 NCOA1Q15788 1441 aa32.11■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms