RNA–Protein interactions for RNA: ENST00000423041.6

PAPD4-202, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAPD4, Length 3,223 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-202ENST00000423041 GLIPR1L2Q4G1C9 344 aa13.11□□□□□ -0.31
PAPD4-202ENST00000423041 CDK11AQ9UQ88 783 aaPredicted RBP13.11□□□□□ -0.31
PAPD4-202ENST00000423041 KIF21AQ7Z4S6 1674 aa13.1□□□□□ -0.31
PAPD4-202ENST00000423041 SYNJ1O43426 1573 aa13.08□□□□□ -0.32
PAPD4-202ENST00000423041 CUX1P39880 1505 aa13.07□□□□□ -0.32
PAPD4-202ENST00000423041 NOP58Q9Y2X3 529 aaKnown RBP13.06□□□□□ -0.32
PAPD4-202ENST00000423041 ZMYND15Q9H091 742 aa13.05□□□□□ -0.32
PAPD4-202ENST00000423041 URB2Q14146 1524 aaKnown RBP13.05□□□□□ -0.32
PAPD4-202ENST00000423041 MRC2Q9UBG0 1479 aa13.04□□□□□ -0.32
PAPD4-202ENST00000423041 TOPBP1Q92547 1522 aa13.04□□□□□ -0.32
PAPD4-202ENST00000423041 FGD5Q6ZNL6 1462 aa13.03□□□□□ -0.32
PAPD4-202ENST00000423041 SOGA1O94964 1423 aa13.03□□□□□ -0.32
PAPD4-202ENST00000423041 RAD54L2Q9Y4B4 1467 aa13.03□□□□□ -0.32
PAPD4-202ENST00000423041 VSIG10Q8N0Z9 540 aa13.02□□□□□ -0.33
PAPD4-202ENST00000423041 TIMELESSQ9UNS1 1208 aa13.02□□□□□ -0.33
PAPD4-202ENST00000423041 PRDM2Q13029 1718 aa13.02□□□□□ -0.33
PAPD4-202ENST00000423041 RANGAP1P46060 587 aaPredicted RBP13.01□□□□□ -0.33
PAPD4-202ENST00000423041 TDRD9Q8NDG6 1382 aaKnown RBP13.01□□□□□ -0.33
PAPD4-202ENST00000423041 POLA1P09884 1462 aaPredicted RBP12.98□□□□□ -0.33
PAPD4-202ENST00000423041 DNMBPQ6XZF7 1577 aa12.98□□□□□ -0.33
PAPD4-202ENST00000423041 RUSC2Q8N2Y8 1516 aa12.98□□□□□ -0.33
PAPD4-202ENST00000423041 CUX2O14529 1486 aa12.98□□□□□ -0.33
PAPD4-202ENST00000423041 TOP2BQ02880 1626 aa12.98□□□□□ -0.33
PAPD4-202ENST00000423041 FBLN2P98095 1184 aa12.97□□□□□ -0.33
PAPD4-202ENST00000423041 PAK3O75914 559 aaPredicted RBP12.96□□□□□ -0.33
PAPD4-202ENST00000423041 UBTFP17480 764 aaKnown RBP12.96□□□□□ -0.33
PAPD4-202ENST00000423041 RSPH6AQ9H0K4 717 aa12.95□□□□□ -0.34
PAPD4-202ENST00000423041 KCNH8Q96L42 1107 aa12.94□□□□□ -0.34
PAPD4-202ENST00000423041 A0A0U1RQG5 324 aaPredicted RBP12.92□□□□□ -0.34
PAPD4-202ENST00000423041 KIF27Q86VH2 1401 aa12.91□□□□□ -0.34
PAPD4-202ENST00000423041 AQRO60306 1485 aaKnown RBP eCLIP12.91□□□□□ -0.34
PAPD4-202ENST00000423041 C11orf95C9JLR9 678 aaPredicted RBP12.91□□□□□ -0.34
PAPD4-202ENST00000423041 BIVM-ERCC5R4GMW8 1640 aa12.9□□□□□ -0.34
PAPD4-202ENST00000423041 PDE4CQ08493 712 aa12.9□□□□□ -0.34
PAPD4-202ENST00000423041 WDR62O43379 1518 aa12.88□□□□□ -0.35
PAPD4-202ENST00000423041 THOC2Q8NI27 1593 aaKnown RBP12.88□□□□□ -0.35
PAPD4-202ENST00000423041 ZNF608Q9ULD9 1512 aaPredicted RBP12.87□□□□□ -0.35
PAPD4-202ENST00000423041 BRPF3Q9ULD4 1205 aa12.85□□□□□ -0.35
PAPD4-202ENST00000423041 FGD1P98174 961 aa12.84□□□□□ -0.35
PAPD4-202ENST00000423041 IFT140Q96RY7 1462 aa12.84□□□□□ -0.35
PAPD4-202ENST00000423041 GAPVD1Q14C86 1478 aa12.83□□□□□ -0.36
PAPD4-202ENST00000423041 WASHC2AQ641Q2 1341 aa12.83□□□□□ -0.36
PAPD4-202ENST00000423041 CHMP7Q8WUX9 453 aaPredicted RBP12.82□□□□□ -0.36
PAPD4-202ENST00000423041 ZBTB47Q9UFB7 747 aaPredicted RBP12.82□□□□□ -0.36
PAPD4-202ENST00000423041 RBM10P98175 930 aaKnown RBP12.82□□□□□ -0.36
PAPD4-202ENST00000423041 ABCA10Q8WWZ4 1543 aa12.81□□□□□ -0.36
PAPD4-202ENST00000423041 WASHC2CQ9Y4E1 1318 aa12.81□□□□□ -0.36
PAPD4-202ENST00000423041 IGF1RP08069 1367 aa12.81□□□□□ -0.36
PAPD4-202ENST00000423041 EEA1Q15075 1411 aa12.8□□□□□ -0.36
PAPD4-202ENST00000423041 CARMIL1Q5VZK9 1371 aa12.8□□□□□ -0.36
PAPD4-202ENST00000423041 PDIA4P13667 645 aaKnown RBP12.8□□□□□ -0.36
PAPD4-202ENST00000423041 ANP32AP39687 249 aaKnown RBP12.79□□□□□ -0.36
PAPD4-202ENST00000423041 AAMPQ13685 434 aa12.79□□□□□ -0.36
PAPD4-202ENST00000423041 TRIM52Q96A61 297 aa12.79□□□□□ -0.36
PAPD4-202ENST00000423041 NEFMP07197 916 aa12.79□□□□□ -0.36
PAPD4-202ENST00000423041 IPO9Q96P70 1041 aaKnown RBP12.79□□□□□ -0.36
PAPD4-202ENST00000423041 IRX6P78412 446 aaPredicted RBP12.77□□□□□ -0.36
PAPD4-202ENST00000423041 HNRNPUL2Q1KMD3 747 aaKnown RBP12.77□□□□□ -0.37
PAPD4-202ENST00000423041 TARBP1Q13395 1621 aaKnown RBP12.76□□□□□ -0.37
PAPD4-202ENST00000423041 USP35Q9P2H5 1018 aa12.75□□□□□ -0.37
PAPD4-202ENST00000423041 RAPGEF2Q9Y4G8 1499 aa12.74□□□□□ -0.37
PAPD4-202ENST00000423041 GRIN2BQ13224 1484 aa12.73□□□□□ -0.37
PAPD4-202ENST00000423041 P3H3Q8IVL6 736 aa12.73□□□□□ -0.37
PAPD4-202ENST00000423041 SNAPC4Q5SXM2 1469 aa12.72□□□□□ -0.37
PAPD4-202ENST00000423041 BCL11BQ9C0K0 894 aaPredicted RBP12.71□□□□□ -0.37
PAPD4-202ENST00000423041 PPP4R2Q9NY27 417 aa12.71□□□□□ -0.37
PAPD4-202ENST00000423041 HSP90AA2PQ14568 343 aaPredicted RBP12.71□□□□□ -0.38
PAPD4-202ENST00000423041 EIF4G3O43432 1585 aaKnown RBP12.71□□□□□ -0.38
PAPD4-202ENST00000423041 FAM43AQ8N2R8 423 aa12.7□□□□□ -0.38
PAPD4-202ENST00000423041 GOLGA3Q08378 1498 aa12.7□□□□□ -0.38
PAPD4-202ENST00000423041 ATP1B4Q9UN42 357 aaPredicted RBP12.67□□□□□ -0.38
PAPD4-202ENST00000423041 LAS1LQ9Y4W2 734 aaKnown RBP12.66□□□□□ -0.38
PAPD4-202ENST00000423041 ABCA5Q8WWZ7 1642 aa12.66□□□□□ -0.38
PAPD4-202ENST00000423041 GSE1Q14687 1217 aa12.66□□□□□ -0.38
PAPD4-202ENST00000423041 RRP9O43818 475 aaKnown RBP12.66□□□□□ -0.38
PAPD4-202ENST00000423041 PRXQ9BXM0 1461 aa12.65□□□□□ -0.38
PAPD4-202ENST00000423041 FHAD1B1AJZ9 1412 aa12.65□□□□□ -0.39
PAPD4-202ENST00000423041 WDR97A6NE52 1622 aa12.64□□□□□ -0.39
PAPD4-202ENST00000423041 ERICH3Q5RHP9 1530 aa12.63□□□□□ -0.39
PAPD4-202ENST00000423041 B4GALNT3Q6L9W6 998 aa12.63□□□□□ -0.39
PAPD4-202ENST00000423041 AEBP2Q6ZN18 517 aaPredicted RBP12.62□□□□□ -0.39
PAPD4-202ENST00000423041 PPM1GO15355 546 aaPredicted RBP12.62□□□□□ -0.39
PAPD4-202ENST00000423041 PBRM1Q86U86 1689 aa12.61□□□□□ -0.39
PAPD4-202ENST00000423041 HSP90AA1P07900 732 aaKnown RBP12.6□□□□□ -0.39
PAPD4-202ENST00000423041 TNIKQ9UKE5 1360 aa12.6□□□□□ -0.39
PAPD4-202ENST00000423041 MAGI1Q96QZ7 1491 aaPredicted RBP12.59□□□□□ -0.39
PAPD4-202ENST00000423041 DDX10Q13206 875 aaKnown RBP12.59□□□□□ -0.39
PAPD4-202ENST00000423041 SYNJ2O15056 1496 aa12.58□□□□□ -0.4
PAPD4-202ENST00000423041 CCER2I3L3R5 266 aa12.58□□□□□ -0.4
PAPD4-202ENST00000423041 CEP162Q5TB80 1403 aa12.58□□□□□ -0.4
PAPD4-202ENST00000423041 ARID3CA6NKF2 412 aa12.58□□□□□ -0.4
PAPD4-202ENST00000423041 KIF21BO75037 1637 aa12.57□□□□□ -0.4
PAPD4-202ENST00000423041 GRIN2AQ12879 1464 aa12.57□□□□□ -0.4
PAPD4-202ENST00000423041 CLIP1P30622 1438 aa12.56□□□□□ -0.4
PAPD4-202ENST00000423041 OSCARQ8IYS5 282 aa12.56□□□□□ -0.4
PAPD4-202ENST00000423041 CUL7Q14999 1698 aa12.56□□□□□ -0.4
PAPD4-202ENST00000423041 ADAMTS12P58397 1594 aa12.56□□□□□ -0.4
PAPD4-202ENST00000423041 NAP1L5Q96NT1 182 aaPredicted RBP12.55□□□□□ -0.4
PAPD4-202ENST00000423041 FRAT1Q92837 279 aaPredicted RBP12.55□□□□□ -0.4
PAPD4-202ENST00000423041 JPH4Q96JJ6 628 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms