RNA–Protein interactions for RNA: ENST00000422863.1

HLA-DQA1-204, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-204ENST00000422863 CLASP1Q7Z460 1538 aa14.16□□□□□ -0.14
HLA-DQA1-204ENST00000422863 CHMP7Q8WUX9 453 aaPredicted RBP14.16□□□□□ -0.14
HLA-DQA1-204ENST00000422863 SNAPC4Q5SXM2 1469 aa14.16□□□□□ -0.14
HLA-DQA1-204ENST00000422863 SOGA1O94964 1423 aa14.15□□□□□ -0.14
HLA-DQA1-204ENST00000422863 ZNF219Q9P2Y4 722 aaPredicted RBP14.13□□□□□ -0.15
HLA-DQA1-204ENST00000422863 SYNJ1O43426 1573 aa14.13□□□□□ -0.15
HLA-DQA1-204ENST00000422863 CHRDL2Q6WN34 429 aa14.08□□□□□ -0.16
HLA-DQA1-204ENST00000422863 GAPVD1Q14C86 1478 aa14.06□□□□□ -0.16
HLA-DQA1-204ENST00000422863 FGD5Q6ZNL6 1462 aa14.06□□□□□ -0.16
HLA-DQA1-204ENST00000422863 APLP2Q06481 763 aa14.06□□□□□ -0.16
HLA-DQA1-204ENST00000422863 RBM42Q9BTD8 480 aaKnown RBP14.06□□□□□ -0.16
HLA-DQA1-204ENST00000422863 PBRM1Q86U86 1689 aa14.06□□□□□ -0.16
HLA-DQA1-204ENST00000422863 MAGI1Q96QZ7 1491 aaPredicted RBP14.04□□□□□ -0.16
HLA-DQA1-204ENST00000422863 ERCC6L2Q5T890 1561 aa14.02□□□□□ -0.16
HLA-DQA1-204ENST00000422863 SYNJ2O15056 1496 aa14.02□□□□□ -0.16
HLA-DQA1-204ENST00000422863 GRIN2BQ13224 1484 aa14.02□□□□□ -0.16
HLA-DQA1-204ENST00000422863 WDR97A6NE52 1622 aa14.01□□□□□ -0.17
HLA-DQA1-204ENST00000422863 SP7Q8TDD2 431 aaPredicted RBP14□□□□□ -0.17
HLA-DQA1-204ENST00000422863 KIF13AQ9H1H9 1805 aa13.99□□□□□ -0.17
HLA-DQA1-204ENST00000422863 CUX1P39880 1505 aa13.99□□□□□ -0.17
HLA-DQA1-204ENST00000422863 SLC4A2P04920 1241 aa13.95□□□□□ -0.18
HLA-DQA1-204ENST00000422863 CEP170Q5SW79 1584 aa13.89□□□□□ -0.19
HLA-DQA1-204ENST00000422863 ABCA5Q8WWZ7 1642 aa13.88□□□□□ -0.19
HLA-DQA1-204ENST00000422863 GRIN2AQ12879 1464 aa13.86□□□□□ -0.19
HLA-DQA1-204ENST00000422863 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.85□□□□□ -0.19
HLA-DQA1-204ENST00000422863 HNRNPUL2Q1KMD3 747 aaKnown RBP13.85□□□□□ -0.19
HLA-DQA1-204ENST00000422863 TSPOAP1O95153 1857 aa13.84□□□□□ -0.19
HLA-DQA1-204ENST00000422863 ILDR1Q86SU0 546 aaPredicted RBP13.84□□□□□ -0.19
HLA-DQA1-204ENST00000422863 ABCA10Q8WWZ4 1543 aa13.83□□□□□ -0.2
HLA-DQA1-204ENST00000422863 SHROOM2Q13796 1616 aa13.82□□□□□ -0.2
HLA-DQA1-204ENST00000422863 FAM69CQ0P6D2 419 aa13.81□□□□□ -0.2
HLA-DQA1-204ENST00000422863 ADAMTS12P58397 1594 aa13.8□□□□□ -0.2
HLA-DQA1-204ENST00000422863 KDM4FA0A1W2PPD8 638 aa13.8□□□□□ -0.2
HLA-DQA1-204ENST00000422863 NUP160Q12769 1436 aa13.79□□□□□ -0.2
HLA-DQA1-204ENST00000422863 PRG4Q92954 1404 aaPredicted RBP13.75□□□□□ -0.21
HLA-DQA1-204ENST00000422863 SAMD1Q6SPF0 538 aaPredicted RBP13.75□□□□□ -0.21
HLA-DQA1-204ENST00000422863 KDM6BO15054 1643 aa13.73□□□□□ -0.21
HLA-DQA1-204ENST00000422863 NPM1P06748 294 aaKnown RBP eCLIP13.73□□□□□ -0.21
HLA-DQA1-204ENST00000422863 JPH4Q96JJ6 628 aa13.73□□□□□ -0.21
HLA-DQA1-204ENST00000422863 ABCC10Q5T3U5 1492 aa13.73□□□□□ -0.21
HLA-DQA1-204ENST00000422863 FHAD1B1AJZ9 1412 aa13.72□□□□□ -0.21
HLA-DQA1-204ENST00000422863 DIP2BQ9P265 1576 aa13.71□□□□□ -0.21
HLA-DQA1-204ENST00000422863 WRNQ14191 1432 aaPredicted RBP eCLIP13.69□□□□□ -0.22
HLA-DQA1-204ENST00000422863 ADCY10Q96PN6 1610 aa13.68□□□□□ -0.22
HLA-DQA1-204ENST00000422863 BIVM-ERCC5R4GMW8 1640 aa13.67□□□□□ -0.22
HLA-DQA1-204ENST00000422863 MAPKBP1O60336 1514 aa13.64□□□□□ -0.23
HLA-DQA1-204ENST00000422863 ERICH3Q5RHP9 1530 aa13.64□□□□□ -0.23
HLA-DQA1-204ENST00000422863 TOP2BQ02880 1626 aa13.64□□□□□ -0.23
HLA-DQA1-204ENST00000422863 TTBK1Q5TCY1 1321 aaPredicted RBP13.63□□□□□ -0.23
HLA-DQA1-204ENST00000422863 RUSC2Q8N2Y8 1516 aa13.62□□□□□ -0.23
HLA-DQA1-204ENST00000422863 POLA2Q14181 598 aa13.61□□□□□ -0.23
HLA-DQA1-204ENST00000422863 SUPT5HO00267 1087 aaKnown RBP13.58□□□□□ -0.24
HLA-DQA1-204ENST00000422863 AKT1S1Q96B36 256 aa13.58□□□□□ -0.24
HLA-DQA1-204ENST00000422863 PIP4P2Q8N4L2 257 aa13.57□□□□□ -0.24
HLA-DQA1-204ENST00000422863 PPRC1Q5VV67 1664 aaKnown RBP13.56□□□□□ -0.24
HLA-DQA1-204ENST00000422863 ADGRL1O94910 1474 aa13.55□□□□□ -0.24
HLA-DQA1-204ENST00000422863 HAX1O00165 279 aa13.53□□□□□ -0.24
HLA-DQA1-204ENST00000422863 HECW2Q9P2P5 1572 aa13.52□□□□□ -0.25
HLA-DQA1-204ENST00000422863 CUL7Q14999 1698 aa13.52□□□□□ -0.25
HLA-DQA1-204ENST00000422863 KIAA0586Q9BVV6 1533 aa13.47□□□□□ -0.25
HLA-DQA1-204ENST00000422863 COL17A1Q9UMD9 1497 aaPredicted RBP13.47□□□□□ -0.25
HLA-DQA1-204ENST00000422863 PTPRGP23470 1445 aa13.47□□□□□ -0.25
HLA-DQA1-204ENST00000422863 ASXL2Q76L83 1435 aa13.46□□□□□ -0.26
HLA-DQA1-204ENST00000422863 REM2Q8IYK8 340 aaPredicted RBP13.45□□□□□ -0.26
HLA-DQA1-204ENST00000422863 GLI2P10070 1586 aa13.43□□□□□ -0.26
HLA-DQA1-204ENST00000422863 ABCC2Q92887 1545 aa13.42□□□□□ -0.26
HLA-DQA1-204ENST00000422863 IGF1RP08069 1367 aa13.41□□□□□ -0.26
HLA-DQA1-204ENST00000422863 PLB1Q6P1J6 1458 aa13.41□□□□□ -0.26
HLA-DQA1-204ENST00000422863 MAP3K4Q9Y6R4 1608 aa13.39□□□□□ -0.27
HLA-DQA1-204ENST00000422863 TNIKQ9UKE5 1360 aa13.39□□□□□ -0.27
HLA-DQA1-204ENST00000422863 KCNA4P22459 653 aa13.38□□□□□ -0.27
HLA-DQA1-204ENST00000422863 FXR2P51116 673 aaKnown RBP eCLIP13.38□□□□□ -0.27
HLA-DQA1-204ENST00000422863 EPRSP07814 1512 aaKnown RBP13.37□□□□□ -0.27
HLA-DQA1-204ENST00000422863 ZCCHC11Q5TAX3 1644 aaKnown RBP13.36□□□□□ -0.27
HLA-DQA1-204ENST00000422863 CARMIL2Q6F5E8 1435 aa13.36□□□□□ -0.27
HLA-DQA1-204ENST00000422863 UACAQ9BZF9 1416 aa13.34□□□□□ -0.27
HLA-DQA1-204ENST00000422863 EVX2Q03828 476 aa13.34□□□□□ -0.27
HLA-DQA1-204ENST00000422863 FBXO41Q8TF61 875 aa13.34□□□□□ -0.27
HLA-DQA1-204ENST00000422863 KIF27Q86VH2 1401 aa13.33□□□□□ -0.28
HLA-DQA1-204ENST00000422863 CARMIL1Q5VZK9 1371 aa13.32□□□□□ -0.28
HLA-DQA1-204ENST00000422863 IQGAP2Q13576 1575 aa13.32□□□□□ -0.28
HLA-DQA1-204ENST00000422863 UHRF1BP1LA0JNW5 1464 aa13.32□□□□□ -0.28
HLA-DQA1-204ENST00000422863 TEX14Q8IWB6 1497 aa13.32□□□□□ -0.28
HLA-DQA1-204ENST00000422863 PITPNM1O00562 1244 aa13.31□□□□□ -0.28
HLA-DQA1-204ENST00000422863 KIF21BO75037 1637 aa13.31□□□□□ -0.28
HLA-DQA1-204ENST00000422863 MYCNP04198 464 aaPredicted RBP13.3□□□□□ -0.28
HLA-DQA1-204ENST00000422863 DISP1Q96F81 1524 aa13.29□□□□□ -0.28
HLA-DQA1-204ENST00000422863 KDM5BQ9UGL1 1544 aa13.29□□□□□ -0.28
HLA-DQA1-204ENST00000422863 KCNH8Q96L42 1107 aa13.28□□□□□ -0.28
HLA-DQA1-204ENST00000422863 ZBTB12Q9Y330 459 aaPredicted RBP13.27□□□□□ -0.29
HLA-DQA1-204ENST00000422863 CFAP43Q8NDM7 1665 aa13.24□□□□□ -0.29
HLA-DQA1-204ENST00000422863 WDR7Q9Y4E6 1490 aa13.23□□□□□ -0.29
HLA-DQA1-204ENST00000422863 CD109Q6YHK3 1445 aa13.22□□□□□ -0.29
HLA-DQA1-204ENST00000422863 KIAA0556O60303 1618 aa13.21□□□□□ -0.29
HLA-DQA1-204ENST00000422863 UGGT2Q9NYU1 1516 aa13.19□□□□□ -0.3
HLA-DQA1-204ENST00000422863 MAGI3Q5TCQ9 1506 aa13.18□□□□□ -0.3
HLA-DQA1-204ENST00000422863 ADAMTSL3P82987 1691 aa13.17□□□□□ -0.3
HLA-DQA1-204ENST00000422863 PTPRMP28827 1452 aa13.16□□□□□ -0.3
HLA-DQA1-204ENST00000422863 ARID3CA6NKF2 412 aa13.16□□□□□ -0.3
HLA-DQA1-204ENST00000422863 CTTNBP2Q8WZ74 1663 aa13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms