RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 TSHZ2Q9NRE2 1034 aa20.97■□□□□ 0.95
CHRD-204ENST00000420973 BIVM-ERCC5R4GMW8 1640 aa20.93■□□□□ 0.94
CHRD-204ENST00000420973 FHOD3Q2V2M9 1422 aa20.92■□□□□ 0.94
CHRD-204ENST00000420973 POLA1P09884 1462 aaPredicted RBP20.9■□□□□ 0.94
CHRD-204ENST00000420973 TOPBP1Q92547 1522 aa20.88■□□□□ 0.93
CHRD-204ENST00000420973 PDS5BQ9NTI5 1447 aa20.88■□□□□ 0.93
CHRD-204ENST00000420973 ARHGAP35Q9NRY4 1499 aa20.87■□□□□ 0.93
CHRD-204ENST00000420973 CCDC136Q96JN2 1154 aa20.81■□□□□ 0.92
CHRD-204ENST00000420973 AQRO60306 1485 aaKnown RBP eCLIP20.81■□□□□ 0.925e-7■■■■□ 20.7
CHRD-204ENST00000420973 CHIC2Q9UKJ5 165 aa20.8■□□□□ 0.92
CHRD-204ENST00000420973 URB2Q14146 1524 aaKnown RBP20.78■□□□□ 0.92
CHRD-204ENST00000420973 ERICH3Q5RHP9 1530 aa20.78■□□□□ 0.92
CHRD-204ENST00000420973 ZNF316A6NFI3 1004 aaPredicted RBP20.77■□□□□ 0.92
CHRD-204ENST00000420973 SUPT16HQ9Y5B9 1047 aaKnown RBP20.77■□□□□ 0.92
CHRD-204ENST00000420973 ERCC6Q03468 1493 aa20.77■□□□□ 0.92
CHRD-204ENST00000420973 CCNB3Q8WWL7 1395 aa20.74■□□□□ 0.91
CHRD-204ENST00000420973 MTUS2Q5JR59 1369 aa20.73■□□□□ 0.91
CHRD-204ENST00000420973 CHMP7Q8WUX9 453 aaPredicted RBP20.72■□□□□ 0.91
CHRD-204ENST00000420973 GAPVD1Q14C86 1478 aa20.71■□□□□ 0.91
CHRD-204ENST00000420973 DNMBPQ6XZF7 1577 aa20.7■□□□□ 0.9
CHRD-204ENST00000420973 BCANQ96GW7 911 aa20.7■□□□□ 0.9
CHRD-204ENST00000420973 HIRIP3Q9BW71 556 aaPredicted RBP20.69■□□□□ 0.9
CHRD-204ENST00000420973 MIER1Q8N108 512 aa20.68■□□□□ 0.9
CHRD-204ENST00000420973 SIN3AQ96ST3 1273 aa20.68■□□□□ 0.9
CHRD-204ENST00000420973 EIF5BO60841 1220 aaKnown RBP20.67■□□□□ 0.9
CHRD-204ENST00000420973 SLC24A1O60721 1099 aa20.65■□□□□ 0.9
CHRD-204ENST00000420973 SALL2Q9Y467 1007 aaPredicted RBP20.65■□□□□ 0.9
CHRD-204ENST00000420973 RRP7BPQ9NSQ0 103 aa20.64■□□□□ 0.9
CHRD-204ENST00000420973 ZNF777Q9ULD5 760 aaPredicted RBP20.64■□□□□ 0.9
CHRD-204ENST00000420973 TRIM52Q96A61 297 aa20.63■□□□□ 0.89
CHRD-204ENST00000420973 PHLDB1Q86UU1 1377 aa20.63■□□□□ 0.89
CHRD-204ENST00000420973 ABCA10Q8WWZ4 1543 aa20.61■□□□□ 0.89
CHRD-204ENST00000420973 FHAD1B1AJZ9 1412 aa20.6■□□□□ 0.89
CHRD-204ENST00000420973 LAMC3Q9Y6N6 1575 aa20.58■□□□□ 0.89
CHRD-204ENST00000420973 RAB3GAP2Q9H2M9 1393 aa20.56■□□□□ 0.88
CHRD-204ENST00000420973 ZNF608Q9ULD9 1512 aaPredicted RBP20.55■□□□□ 0.88
CHRD-204ENST00000420973 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.54■□□□□ 0.88
CHRD-204ENST00000420973 KIF21AQ7Z4S6 1674 aa20.54■□□□□ 0.88
CHRD-204ENST00000420973 DHX57Q6P158 1386 aaKnown RBP20.54■□□□□ 0.88
CHRD-204ENST00000420973 PRDM2Q13029 1718 aa20.5■□□□□ 0.87
CHRD-204ENST00000420973 CNGB1Q14028 1251 aaPredicted RBP20.49■□□□□ 0.87
CHRD-204ENST00000420973 LRRC9Q6ZRR7 1453 aa20.49■□□□□ 0.87
CHRD-204ENST00000420973 DEKP35659 375 aaKnown RBP20.48■□□□□ 0.87
CHRD-204ENST00000420973 UBE2Q2Q8WVN8 375 aa20.47■□□□□ 0.87
CHRD-204ENST00000420973 RBM19Q9Y4C8 960 aaKnown RBP20.47■□□□□ 0.87
CHRD-204ENST00000420973 PCF11O94913 1555 aaKnown RBP20.45■□□□□ 0.86
CHRD-204ENST00000420973 FMN1Q68DA7 1419 aa20.44■□□□□ 0.86
CHRD-204ENST00000420973 MRC2Q9UBG0 1479 aa20.43■□□□□ 0.86
CHRD-204ENST00000420973 FOXD1Q16676 465 aa20.43■□□□□ 0.86
CHRD-204ENST00000420973 RTN4Q9NQC3 1192 aaKnown RBP20.42■□□□□ 0.86
CHRD-204ENST00000420973 TIAM1Q13009 1591 aa20.41■□□□□ 0.86
CHRD-204ENST00000420973 CLSPNQ9HAW4 1339 aa20.4■□□□□ 0.86
CHRD-204ENST00000420973 RRBP1Q9P2E9 1410 aaKnown RBP20.4■□□□□ 0.86
CHRD-204ENST00000420973 SETD5Q9C0A6 1442 aa20.38■□□□□ 0.85
CHRD-204ENST00000420973 ZNF644Q9H582 1327 aaPredicted RBP20.36■□□□□ 0.85
CHRD-204ENST00000420973 DDX10Q13206 875 aaKnown RBP20.36■□□□□ 0.85
CHRD-204ENST00000420973 PLEKHG5O94827 1062 aa20.34■□□□□ 0.85
CHRD-204ENST00000420973 ZNF326Q5BKZ1 582 aaKnown RBP20.34■□□□□ 0.85
CHRD-204ENST00000420973 CASKIN1Q8WXD9 1431 aa20.34■□□□□ 0.85
CHRD-204ENST00000420973 JPH4Q96JJ6 628 aa20.33■□□□□ 0.85
CHRD-204ENST00000420973 POLR3GLQ9BT43 218 aa20.33■□□□□ 0.85
CHRD-204ENST00000420973 SNAPC4Q5SXM2 1469 aa20.33■□□□□ 0.84
CHRD-204ENST00000420973 GRIN2BQ13224 1484 aa20.32■□□□□ 0.84
CHRD-204ENST00000420973 CDK11AQ9UQ88 783 aaPredicted RBP20.31■□□□□ 0.84
CHRD-204ENST00000420973 KCNH8Q96L42 1107 aa20.3■□□□□ 0.84
CHRD-204ENST00000420973 CDK13Q14004 1512 aaKnown RBP20.27■□□□□ 0.84
CHRD-204ENST00000420973 CUL7Q14999 1698 aa20.27■□□□□ 0.84
CHRD-204ENST00000420973 PKNOX2Q96KN3 472 aa20.27■□□□□ 0.84
CHRD-204ENST00000420973 CFDP1Q9UEE9 299 aaPredicted RBP20.26■□□□□ 0.83
CHRD-204ENST00000420973 TONSLQ96HA7 1378 aa20.26■□□□□ 0.83
CHRD-204ENST00000420973 FYCO1Q9BQS8 1478 aa20.26■□□□□ 0.83
CHRD-204ENST00000420973 FGD6Q6ZV73 1430 aa20.26■□□□□ 0.83
CHRD-204ENST00000420973 MSH5O43196 834 aa20.25■□□□□ 0.83
CHRD-204ENST00000420973 FKBP8Q14318 412 aa20.25■□□□□ 0.83
CHRD-204ENST00000420973 NCOA2Q15596 1464 aa20.24■□□□□ 0.83
CHRD-204ENST00000420973 MYT1LQ9UL68 1186 aa20.23■□□□□ 0.83
CHRD-204ENST00000420973 NBR1Q14596 966 aa20.22■□□□□ 0.83
CHRD-204ENST00000420973 IFT140Q96RY7 1462 aa20.22■□□□□ 0.83
CHRD-204ENST00000420973 ABCA5Q8WWZ7 1642 aa20.21■□□□□ 0.83
CHRD-204ENST00000420973 EFCAB5A4FU69 1503 aa20.2■□□□□ 0.82
CHRD-204ENST00000420973 PLEKHD1A6NEE1 506 aa20.2■□□□□ 0.82
CHRD-204ENST00000420973 TARBP1Q13395 1621 aaKnown RBP20.18■□□□□ 0.82
CHRD-204ENST00000420973 NEFLP07196 543 aa20.17■□□□□ 0.82
CHRD-204ENST00000420973 SLC4A1APQ9BWU0 796 aaKnown RBP20.17■□□□□ 0.82
CHRD-204ENST00000420973 CTTNBP2Q8WZ74 1663 aa20.16■□□□□ 0.82
CHRD-204ENST00000420973 PTPRKQ15262 1439 aa20.16■□□□□ 0.82
CHRD-204ENST00000420973 PODXL2Q9NZ53 605 aa20.15■□□□□ 0.82
CHRD-204ENST00000420973 IQGAP2Q13576 1575 aa20.15■□□□□ 0.82
CHRD-204ENST00000420973 MYOM3Q5VTT5 1437 aa20.14■□□□□ 0.82
CHRD-204ENST00000420973 ERICH6BQ5W0A0 696 aa20.14■□□□□ 0.81
CHRD-204ENST00000420973 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.13■□□□□ 0.812e-7■□□□□ 11.1
CHRD-204ENST00000420973 PLB1Q6P1J6 1458 aa20.11■□□□□ 0.81
CHRD-204ENST00000420973 PRG4Q92954 1404 aaPredicted RBP20.11■□□□□ 0.81
CHRD-204ENST00000420973 CCDC18Q5T9S5 1454 aa20.1■□□□□ 0.81
CHRD-204ENST00000420973 GRIN2AQ12879 1464 aa20.09■□□□□ 0.81
CHRD-204ENST00000420973 IL27Q8NEV9 243 aa20.09■□□□□ 0.81
CHRD-204ENST00000420973 EPRSP07814 1512 aaKnown RBP20.09■□□□□ 0.81
CHRD-204ENST00000420973 HNRNPMP52272 730 aaKnown RBP eCLIP20.08■□□□□ 0.81
CHRD-204ENST00000420973 MPHOSPH9Q99550 1183 aa20.06■□□□□ 0.8
CHRD-204ENST00000420973 WDR97A6NE52 1622 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms