RNA–Protein interactions for RNA: ENST00000420732.6

MS4A6A-202, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 1 (best) BASIC

Gene MS4A6A, Length 863 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-202ENST00000420732 EHMT2Q96KQ7 1210 aa11.03□□□□□ -0.64
MS4A6A-202ENST00000420732 SMARCA2P51531 1590 aa11.01□□□□□ -0.65
MS4A6A-202ENST00000420732 PRKAR2AP13861 404 aaKnown RBP11□□□□□ -0.65
MS4A6A-202ENST00000420732 TOP2AP11388 1531 aaKnown RBP10.97□□□□□ -0.65
MS4A6A-202ENST00000420732 HMGXB3Q12766 1538 aa10.97□□□□□ -0.65
MS4A6A-202ENST00000420732 SUPT5HO00267 1087 aaKnown RBP10.96□□□□□ -0.65
MS4A6A-202ENST00000420732 PRR29P0C7W0 189 aa10.93□□□□□ -0.66
MS4A6A-202ENST00000420732 KIF21AQ7Z4S6 1674 aa10.92□□□□□ -0.66
MS4A6A-202ENST00000420732 RIMBP3CA6NJZ7 1639 aa10.91□□□□□ -0.66
MS4A6A-202ENST00000420732 RIMBP3BA6NNM3 1639 aa10.91□□□□□ -0.66
MS4A6A-202ENST00000420732 RIMBP3Q9UFD9 1639 aa10.91□□□□□ -0.66
MS4A6A-202ENST00000420732 BAZ1BQ9UIG0 1483 aaKnown RBP10.88□□□□□ -0.67
MS4A6A-202ENST00000420732 CHADLQ6NUI6 762 aa10.86□□□□□ -0.67
MS4A6A-202ENST00000420732 CCDC88BA6NC98 1476 aa10.85□□□□□ -0.67
MS4A6A-202ENST00000420732 LAMC3Q9Y6N6 1575 aa10.85□□□□□ -0.67
MS4A6A-202ENST00000420732 C19orf67A6NJJ6 358 aa10.83□□□□□ -0.68
MS4A6A-202ENST00000420732 WDR62O43379 1518 aa10.83□□□□□ -0.68
MS4A6A-202ENST00000420732 ARHGEF11O15085 1522 aa10.8□□□□□ -0.68
MS4A6A-202ENST00000420732 MRC2Q9UBG0 1479 aa10.8□□□□□ -0.68
MS4A6A-202ENST00000420732 PDS5BQ9NTI5 1447 aa10.79□□□□□ -0.68
MS4A6A-202ENST00000420732 STAG3Q9UJ98 1225 aa10.78□□□□□ -0.68
MS4A6A-202ENST00000420732 SPDYE4A6NLX3 237 aa10.75□□□□□ -0.69
MS4A6A-202ENST00000420732 CYB5RLQ6IPT4 315 aa10.72□□□□□ -0.69
MS4A6A-202ENST00000420732 ILDR1Q86SU0 546 aaPredicted RBP10.72□□□□□ -0.69
MS4A6A-202ENST00000420732 FARP1Q9Y4F1 1045 aaPredicted RBP10.72□□□□□ -0.69
MS4A6A-202ENST00000420732 CFTRP13569 1480 aa10.72□□□□□ -0.69
MS4A6A-202ENST00000420732 ARAP1Q96P48 1450 aa10.69□□□□□ -0.7
MS4A6A-202ENST00000420732 GABBR2O75899 941 aa10.67□□□□□ -0.7
MS4A6A-202ENST00000420732 CADPSQ9ULU8 1353 aa10.66□□□□□ -0.7
MS4A6A-202ENST00000420732 CD44P16070 742 aaKnown RBP10.65□□□□□ -0.7
MS4A6A-202ENST00000420732 CLCN6P51797 869 aa10.64□□□□□ -0.71
MS4A6A-202ENST00000420732 PRDM2Q13029 1718 aa10.64□□□□□ -0.71
MS4A6A-202ENST00000420732 CREBZFQ9NS37 354 aa10.59□□□□□ -0.71
MS4A6A-202ENST00000420732 CEP164Q9UPV0 1460 aa10.59□□□□□ -0.71
MS4A6A-202ENST00000420732 URB2Q14146 1524 aaKnown RBP10.58□□□□□ -0.72
MS4A6A-202ENST00000420732 ZNF608Q9ULD9 1512 aaPredicted RBP10.57□□□□□ -0.72
MS4A6A-202ENST00000420732 FANCD2Q9BXW9 1451 aa10.55□□□□□ -0.72
MS4A6A-202ENST00000420732 POTEIP0CG38 1075 aa10.54□□□□□ -0.72
MS4A6A-202ENST00000420732 NPM1P06748 294 aaKnown RBP eCLIP10.51□□□□□ -0.73
MS4A6A-202ENST00000420732 PAK3O75914 559 aaPredicted RBP10.5□□□□□ -0.73
MS4A6A-202ENST00000420732 ZRANB1Q9UGI0 708 aa10.5□□□□□ -0.73
MS4A6A-202ENST00000420732 ABCC8Q09428 1581 aa10.49□□□□□ -0.73
MS4A6A-202ENST00000420732 ZNF579Q8NAF0 562 aaKnown RBP10.49□□□□□ -0.73
MS4A6A-202ENST00000420732 BIVM-ERCC5R4GMW8 1640 aa10.48□□□□□ -0.73
MS4A6A-202ENST00000420732 CUX1P39880 1505 aa10.48□□□□□ -0.73
MS4A6A-202ENST00000420732 SYNJ1O43426 1573 aa10.48□□□□□ -0.73
MS4A6A-202ENST00000420732 TOP2BQ02880 1626 aa10.47□□□□□ -0.73
MS4A6A-202ENST00000420732 WRNQ14191 1432 aaPredicted RBP eCLIP10.47□□□□□ -0.73
MS4A6A-202ENST00000420732 PROM2Q8N271 834 aa10.45□□□□□ -0.74
MS4A6A-202ENST00000420732 DCBLD2Q96PD2 775 aa10.44□□□□□ -0.74
MS4A6A-202ENST00000420732 LHX8Q68G74 356 aa10.43□□□□□ -0.74
MS4A6A-202ENST00000420732 CHD1O14646 1710 aa10.43□□□□□ -0.74
MS4A6A-202ENST00000420732 DNMBPQ6XZF7 1577 aa10.42□□□□□ -0.74
MS4A6A-202ENST00000420732 IFT140Q96RY7 1462 aa10.42□□□□□ -0.74
MS4A6A-202ENST00000420732 TOPBP1Q92547 1522 aa10.41□□□□□ -0.74
MS4A6A-202ENST00000420732 EIF4G3O43432 1585 aaKnown RBP10.4□□□□□ -0.74
MS4A6A-202ENST00000420732 MNX1P50219 401 aaPredicted RBP10.39□□□□□ -0.75
MS4A6A-202ENST00000420732 KDM4FA0A1W2PPD8 638 aa10.37□□□□□ -0.75
MS4A6A-202ENST00000420732 CLASP1Q7Z460 1538 aa10.37□□□□□ -0.75
MS4A6A-202ENST00000420732 PLEKHG5O94827 1062 aa10.36□□□□□ -0.75
MS4A6A-202ENST00000420732 GALR2O43603 387 aaPredicted RBP10.34□□□□□ -0.75
MS4A6A-202ENST00000420732 AQRO60306 1485 aaKnown RBP eCLIP10.34□□□□□ -0.75
MS4A6A-202ENST00000420732 POLA1P09884 1462 aaPredicted RBP10.34□□□□□ -0.75
MS4A6A-202ENST00000420732 FGD5Q6ZNL6 1462 aa10.33□□□□□ -0.76
MS4A6A-202ENST00000420732 PHF12Q96QT6 1004 aa10.32□□□□□ -0.76
MS4A6A-202ENST00000420732 TARBP1Q13395 1621 aaKnown RBP10.32□□□□□ -0.76
MS4A6A-202ENST00000420732 WDR97A6NE52 1622 aa10.31□□□□□ -0.76
MS4A6A-202ENST00000420732 ABCA10Q8WWZ4 1543 aa10.31□□□□□ -0.76
MS4A6A-202ENST00000420732 SOGA1O94964 1423 aa10.3□□□□□ -0.76
MS4A6A-202ENST00000420732 RUSC2Q8N2Y8 1516 aa10.28□□□□□ -0.76
MS4A6A-202ENST00000420732 EEA1Q15075 1411 aa10.28□□□□□ -0.76
MS4A6A-202ENST00000420732 MIER1Q8N108 512 aa10.28□□□□□ -0.76
MS4A6A-202ENST00000420732 RAD54L2Q9Y4B4 1467 aa10.26□□□□□ -0.77
MS4A6A-202ENST00000420732 GAPVD1Q14C86 1478 aa10.25□□□□□ -0.77
MS4A6A-202ENST00000420732 ABCA5Q8WWZ7 1642 aa10.24□□□□□ -0.77
MS4A6A-202ENST00000420732 TSPYL2Q9H2G4 693 aaPredicted RBP10.23□□□□□ -0.77
MS4A6A-202ENST00000420732 IGF1RP08069 1367 aa10.22□□□□□ -0.77
MS4A6A-202ENST00000420732 PRXQ9BXM0 1461 aa10.22□□□□□ -0.77
MS4A6A-202ENST00000420732 POTEB2H3BUK9 544 aa10.21□□□□□ -0.77
MS4A6A-202ENST00000420732 PLCD3Q8N3E9 789 aa10.21□□□□□ -0.77
MS4A6A-202ENST00000420732 KIF27Q86VH2 1401 aa10.21□□□□□ -0.78
MS4A6A-202ENST00000420732 ERCC6L2Q5T890 1561 aa10.21□□□□□ -0.78
MS4A6A-202ENST00000420732 KIF13AQ9H1H9 1805 aa10.21□□□□□ -0.78
MS4A6A-202ENST00000420732 SNAPC4Q5SXM2 1469 aa10.2□□□□□ -0.78
MS4A6A-202ENST00000420732 PELP1Q8IZL8 1130 aaKnown RBP10.2□□□□□ -0.78
MS4A6A-202ENST00000420732 ZBTB47Q9UFB7 747 aaPredicted RBP10.2□□□□□ -0.78
MS4A6A-202ENST00000420732 MS4A3Q96HJ5 214 aa10.18□□□□□ -0.78
MS4A6A-202ENST00000420732 ERICH3Q5RHP9 1530 aa10.17□□□□□ -0.78
MS4A6A-202ENST00000420732 FKBP8Q14318 412 aa10.17□□□□□ -0.78
MS4A6A-202ENST00000420732 CCDC61Q9Y6R9 512 aa10.17□□□□□ -0.78
MS4A6A-202ENST00000420732 KIF21BO75037 1637 aa10.17□□□□□ -0.78
MS4A6A-202ENST00000420732 TDRD9Q8NDG6 1382 aaKnown RBP10.16□□□□□ -0.78
MS4A6A-202ENST00000420732 HECW2Q9P2P5 1572 aa10.16□□□□□ -0.78
MS4A6A-202ENST00000420732 ASTLQ6HA08 431 aaPredicted RBP10.14□□□□□ -0.79
MS4A6A-202ENST00000420732 FBXO41Q8TF61 875 aa10.13□□□□□ -0.79
MS4A6A-202ENST00000420732 KIF12Q96FN5 646 aa10.13□□□□□ -0.79
MS4A6A-202ENST00000420732 OTUD5Q96G74 571 aa10.12□□□□□ -0.79
MS4A6A-202ENST00000420732 CUL7Q14999 1698 aa10.12□□□□□ -0.79
MS4A6A-202ENST00000420732 PBRM1Q86U86 1689 aa10.12□□□□□ -0.79
MS4A6A-202ENST00000420732 GRIN2BQ13224 1484 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms