RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 ARHGAP35Q9NRY4 1499 aa20.16■□□□□ 0.82
AP000550.1-201ENST00000420508 NPM1P06748 294 aaKnown RBP eCLIP20.16■□□□□ 0.82
AP000550.1-201ENST00000420508 MIER1Q8N108 512 aa20.13■□□□□ 0.81
AP000550.1-201ENST00000420508 BCANQ96GW7 911 aa20.12■□□□□ 0.81
AP000550.1-201ENST00000420508 SETD5Q9C0A6 1442 aa20.12■□□□□ 0.81
AP000550.1-201ENST00000420508 HNRNPUQ00839 825 aaKnown RBP eCLIP20.08■□□□□ 0.81
AP000550.1-201ENST00000420508 NEFMP07197 916 aa20.08■□□□□ 0.81
AP000550.1-201ENST00000420508 ERCC6Q03468 1493 aa20.08■□□□□ 0.8
AP000550.1-201ENST00000420508 NCAPD3P42695 1498 aa20.07■□□□□ 0.8
AP000550.1-201ENST00000420508 CFDP1Q9UEE9 299 aaPredicted RBP20.06■□□□□ 0.8
AP000550.1-201ENST00000420508 RRP7BPQ9NSQ0 103 aa20.05■□□□□ 0.8
AP000550.1-201ENST00000420508 FKBP8Q14318 412 aa20.02■□□□□ 0.8
AP000550.1-201ENST00000420508 EIF4G1Q04637 1599 aaKnown RBP20.01■□□□□ 0.79
AP000550.1-201ENST00000420508 KIF21BO75037 1637 aa20.01■□□□□ 0.79
AP000550.1-201ENST00000420508 TMC1Q8TDI8 760 aa19.99■□□□□ 0.79
AP000550.1-201ENST00000420508 CARMIL2Q6F5E8 1435 aa19.97■□□□□ 0.79
AP000550.1-201ENST00000420508 CANXP27824 592 aaKnown RBP19.97■□□□□ 0.79
AP000550.1-201ENST00000420508 ANP32AP39687 249 aaKnown RBP19.97■□□□□ 0.79
AP000550.1-201ENST00000420508 SCAF1Q9H7N4 1312 aaKnown RBP19.97■□□□□ 0.79
AP000550.1-201ENST00000420508 MRS2Q9HD23 443 aa19.97■□□□□ 0.79
AP000550.1-201ENST00000420508 ERICH3Q5RHP9 1530 aa19.95■□□□□ 0.78
AP000550.1-201ENST00000420508 ZBTB47Q9UFB7 747 aaPredicted RBP19.93■□□□□ 0.78
AP000550.1-201ENST00000420508 FANCD2Q9BXW9 1451 aa19.93■□□□□ 0.78
AP000550.1-201ENST00000420508 CDCA8Q53HL2 280 aa19.92■□□□□ 0.78
AP000550.1-201ENST00000420508 FAM9BQ8IZU0 186 aa19.92■□□□□ 0.78
AP000550.1-201ENST00000420508 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.92■□□□□ 0.78
AP000550.1-201ENST00000420508 HMGXB3Q12766 1538 aa19.92■□□□□ 0.78
AP000550.1-201ENST00000420508 KANK4Q5T7N3 995 aaPredicted RBP19.89■□□□□ 0.78
AP000550.1-201ENST00000420508 SLC24A1O60721 1099 aa19.89■□□□□ 0.77
AP000550.1-201ENST00000420508 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.88■□□□□ 0.77
AP000550.1-201ENST00000420508 CCER2I3L3R5 266 aa19.88■□□□□ 0.77
AP000550.1-201ENST00000420508 RUSC2Q8N2Y8 1516 aa19.87■□□□□ 0.77
AP000550.1-201ENST00000420508 ESF1Q9H501 851 aaKnown RBP19.87■□□□□ 0.77
AP000550.1-201ENST00000420508 RAB3GAP2Q9H2M9 1393 aa19.87■□□□□ 0.77
AP000550.1-201ENST00000420508 WDR43Q15061 677 aaKnown RBP eCLIP19.83■□□□□ 0.77
AP000550.1-201ENST00000420508 CCDC18Q5T9S5 1454 aa19.83■□□□□ 0.77
AP000550.1-201ENST00000420508 TDRD9Q8NDG6 1382 aaKnown RBP19.81■□□□□ 0.76
AP000550.1-201ENST00000420508 KDM2AQ9Y2K7 1162 aa19.81■□□□□ 0.76
AP000550.1-201ENST00000420508 CHGAP10645 457 aaKnown RBP19.79■□□□□ 0.76
AP000550.1-201ENST00000420508 CFTRP13569 1480 aa19.79■□□□□ 0.76
AP000550.1-201ENST00000420508 SIN3AQ96ST3 1273 aa19.79■□□□□ 0.76
AP000550.1-201ENST00000420508 FGD5Q6ZNL6 1462 aa19.79■□□□□ 0.76
AP000550.1-201ENST00000420508 STAG3Q9UJ98 1225 aa19.78■□□□□ 0.76
AP000550.1-201ENST00000420508 TOP2BQ02880 1626 aa19.78■□□□□ 0.76
AP000550.1-201ENST00000420508 FHOD3Q2V2M9 1422 aa19.77■□□□□ 0.75
AP000550.1-201ENST00000420508 CCDC136Q96JN2 1154 aa19.76■□□□□ 0.75
AP000550.1-201ENST00000420508 IGF1RP08069 1367 aa19.75■□□□□ 0.75
AP000550.1-201ENST00000420508 CARD11Q9BXL7 1154 aa19.75■□□□□ 0.75
AP000550.1-201ENST00000420508 ANKRD30AQ9BXX3 1397 aa19.73■□□□□ 0.75
AP000550.1-201ENST00000420508 CUX1P39880 1505 aa19.72■□□□□ 0.75
AP000550.1-201ENST00000420508 RSPH4AQ5TD94 716 aa19.72■□□□□ 0.75
AP000550.1-201ENST00000420508 SYNJ1O43426 1573 aa19.72■□□□□ 0.75
AP000550.1-201ENST00000420508 DHX57Q6P158 1386 aaKnown RBP19.71■□□□□ 0.75
AP000550.1-201ENST00000420508 PEG3Q9GZU2 1588 aa19.7■□□□□ 0.74
AP000550.1-201ENST00000420508 KANK1Q14678 1352 aa19.69■□□□□ 0.74
AP000550.1-201ENST00000420508 KCNH8Q96L42 1107 aa19.69■□□□□ 0.74
AP000550.1-201ENST00000420508 HIRIP3Q9BW71 556 aaPredicted RBP19.68■□□□□ 0.74
AP000550.1-201ENST00000420508 UPF2Q9HAU5 1272 aaKnown RBP19.68■□□□□ 0.74
AP000550.1-201ENST00000420508 GAPVD1Q14C86 1478 aa19.66■□□□□ 0.74
AP000550.1-201ENST00000420508 PPP1R15AO75807 674 aaPredicted RBP19.66■□□□□ 0.74
AP000550.1-201ENST00000420508 EFCAB5A4FU69 1503 aa19.66■□□□□ 0.74
AP000550.1-201ENST00000420508 ERICH6BQ5W0A0 696 aa19.65■□□□□ 0.74
AP000550.1-201ENST00000420508 PRXQ9BXM0 1461 aa19.64■□□□□ 0.74
AP000550.1-201ENST00000420508 KNSTRNQ9Y448 316 aa19.63■□□□□ 0.73
AP000550.1-201ENST00000420508 MPHOSPH9Q99550 1183 aa19.62■□□□□ 0.73
AP000550.1-201ENST00000420508 CASKIN1Q8WXD9 1431 aa19.61■□□□□ 0.73
AP000550.1-201ENST00000420508 CFAP53Q96M91 514 aa19.59■□□□□ 0.73
AP000550.1-201ENST00000420508 FYCO1Q9BQS8 1478 aa19.59■□□□□ 0.73
AP000550.1-201ENST00000420508 BICRAQ9NZM4 1560 aa19.58■□□□□ 0.72
AP000550.1-201ENST00000420508 LRRC9Q6ZRR7 1453 aa19.57■□□□□ 0.72
AP000550.1-201ENST00000420508 TMF1P82094 1093 aa19.57■□□□□ 0.72
AP000550.1-201ENST00000420508 PPP4R2Q9NY27 417 aa19.57■□□□□ 0.72
AP000550.1-201ENST00000420508 ROCK2O75116 1388 aaKnown RBP19.56■□□□□ 0.72
AP000550.1-201ENST00000420508 RRBP1Q9P2E9 1410 aaKnown RBP19.56■□□□□ 0.72
AP000550.1-201ENST00000420508 HSPA5P11021 654 aaKnown RBP19.56■□□□□ 0.72
AP000550.1-201ENST00000420508 RGL3Q3MIN7 710 aa19.56■□□□□ 0.72
AP000550.1-201ENST00000420508 PKD2Q13563 968 aa19.53■□□□□ 0.72
AP000550.1-201ENST00000420508 EFCAB2Q5VUJ9 269 aa19.53■□□□□ 0.72
AP000550.1-201ENST00000420508 MYOM3Q5VTT5 1437 aa19.52■□□□□ 0.72
AP000550.1-201ENST00000420508 FGD6Q6ZV73 1430 aa19.52■□□□□ 0.71
AP000550.1-201ENST00000420508 DDRGK1Q96HY6 314 aa19.51■□□□□ 0.71
AP000550.1-201ENST00000420508 NUP155O75694 1391 aa19.49■□□□□ 0.71
AP000550.1-201ENST00000420508 EIF5BO60841 1220 aaKnown RBP19.49■□□□□ 0.71
AP000550.1-201ENST00000420508 DCAF11Q8TEB1 546 aa19.49■□□□□ 0.71
AP000550.1-201ENST00000420508 SUPT16HQ9Y5B9 1047 aaKnown RBP19.49■□□□□ 0.71
AP000550.1-201ENST00000420508 NPM2Q86SE8 214 aaKnown RBP19.48■□□□□ 0.71
AP000550.1-201ENST00000420508 DNMBPQ6XZF7 1577 aa19.48■□□□□ 0.71
AP000550.1-201ENST00000420508 RALBP1Q15311 655 aa19.48■□□□□ 0.71
AP000550.1-201ENST00000420508 RAD54L2Q9Y4B4 1467 aa19.48■□□□□ 0.71
AP000550.1-201ENST00000420508 SALL2Q9Y467 1007 aaPredicted RBP19.47■□□□□ 0.71
AP000550.1-201ENST00000420508 ARAP1Q96P48 1450 aa19.47■□□□□ 0.71
AP000550.1-201ENST00000420508 JPH4Q96JJ6 628 aa19.46■□□□□ 0.71
AP000550.1-201ENST00000420508 GRIN2BQ13224 1484 aa19.45■□□□□ 0.7
AP000550.1-201ENST00000420508 UACAQ9BZF9 1416 aa19.45■□□□□ 0.7
AP000550.1-201ENST00000420508 KTN1Q86UP2 1357 aaKnown RBP19.44■□□□□ 0.7
AP000550.1-201ENST00000420508 ARID4BQ4LE39 1312 aaPredicted RBP19.43■□□□□ 0.7
AP000550.1-201ENST00000420508 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.43■□□□□ 0.7
AP000550.1-201ENST00000420508 EIF3AQ14152 1382 aaKnown RBP19.42■□□□□ 0.7
AP000550.1-201ENST00000420508 MAP3K1Q13233 1512 aa19.42■□□□□ 0.7
AP000550.1-201ENST00000420508 TOPBP1Q92547 1522 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms