RNA–Protein interactions for RNA: ENST00000420115.6

CDV3-202, Transcript of CDV3 homolog, humanhuman

TSL 2 BASIC

Gene CDV3, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDV3-202ENST00000420115 TOP2BQ02880 1626 aa14.3□□□□□ -0.12
CDV3-202ENST00000420115 FKBP8Q14318 412 aa14.29□□□□□ -0.12
CDV3-202ENST00000420115 PRXQ9BXM0 1461 aa14.28□□□□□ -0.12
CDV3-202ENST00000420115 CCNB3Q8WWL7 1395 aa14.28□□□□□ -0.12
CDV3-202ENST00000420115 MAPKBP1O60336 1514 aa14.24□□□□□ -0.13
CDV3-202ENST00000420115 BIVM-ERCC5R4GMW8 1640 aa14.23□□□□□ -0.13
CDV3-202ENST00000420115 BICRAQ9NZM4 1560 aa14.22□□□□□ -0.13
CDV3-202ENST00000420115 RAB3GAP2Q9H2M9 1393 aa14.22□□□□□ -0.13
CDV3-202ENST00000420115 ATAD2BQ9ULI0 1458 aa14.22□□□□□ -0.13
CDV3-202ENST00000420115 NEFLP07196 543 aa14.21□□□□□ -0.13
CDV3-202ENST00000420115 DDX10Q13206 875 aaKnown RBP14.2□□□□□ -0.14
CDV3-202ENST00000420115 PABPN1Q86U42 306 aaKnown RBP eCLIP14.2□□□□□ -0.14
CDV3-202ENST00000420115 WDR97A6NE52 1622 aa14.17□□□□□ -0.14
CDV3-202ENST00000420115 PPP1R15AO75807 674 aaPredicted RBP14.16□□□□□ -0.14
CDV3-202ENST00000420115 TIMELESSQ9UNS1 1208 aa14.15□□□□□ -0.14
CDV3-202ENST00000420115 ARHGAP35Q9NRY4 1499 aa14.15□□□□□ -0.14
CDV3-202ENST00000420115 CCER2I3L3R5 266 aa14.15□□□□□ -0.14
CDV3-202ENST00000420115 SETD5Q9C0A6 1442 aa14.14□□□□□ -0.15
CDV3-202ENST00000420115 TRIM52Q96A61 297 aa14.11□□□□□ -0.15
CDV3-202ENST00000420115 KIF27Q86VH2 1401 aa14.11□□□□□ -0.15
CDV3-202ENST00000420115 DAXXQ9UER7 740 aaPredicted RBP14.11□□□□□ -0.15
CDV3-202ENST00000420115 SIN3AQ96ST3 1273 aa14.1□□□□□ -0.15
CDV3-202ENST00000420115 ERICH6BQ5W0A0 696 aa14.09□□□□□ -0.15
CDV3-202ENST00000420115 ANP32CO43423 234 aa14.09□□□□□ -0.15
CDV3-202ENST00000420115 MAP3K1Q13233 1512 aa14.09□□□□□ -0.15
CDV3-202ENST00000420115 TIAM1Q13009 1591 aa14.08□□□□□ -0.16
CDV3-202ENST00000420115 CUX1P39880 1505 aa14.06□□□□□ -0.16
CDV3-202ENST00000420115 A0A0U1RQG5 324 aaPredicted RBP14.05□□□□□ -0.16
CDV3-202ENST00000420115 FANCIQ9NVI1 1328 aa14.04□□□□□ -0.16
CDV3-202ENST00000420115 HIRIP3Q9BW71 556 aaPredicted RBP14.03□□□□□ -0.16
CDV3-202ENST00000420115 LRRC9Q6ZRR7 1453 aa14.03□□□□□ -0.16
CDV3-202ENST00000420115 PHLDB1Q86UU1 1377 aa14.02□□□□□ -0.16
CDV3-202ENST00000420115 AEBP2Q6ZN18 517 aaPredicted RBP14.02□□□□□ -0.17
CDV3-202ENST00000420115 FAM50AQ14320 339 aaKnown RBP14□□□□□ -0.17
CDV3-202ENST00000420115 MYT1LQ9UL68 1186 aa13.99□□□□□ -0.17
CDV3-202ENST00000420115 IRX6P78412 446 aaPredicted RBP13.98□□□□□ -0.17
CDV3-202ENST00000420115 CDK11AQ9UQ88 783 aaPredicted RBP13.98□□□□□ -0.17
CDV3-202ENST00000420115 VSIG10Q8N0Z9 540 aa13.97□□□□□ -0.17
CDV3-202ENST00000420115 PAK3O75914 559 aaPredicted RBP13.96□□□□□ -0.17
CDV3-202ENST00000420115 CFAP43Q8NDM7 1665 aa13.94□□□□□ -0.18
CDV3-202ENST00000420115 ZMYND15Q9H091 742 aa13.94□□□□□ -0.18
CDV3-202ENST00000420115 RTL5Q5HYW3 569 aaPredicted RBP13.93□□□□□ -0.18
CDV3-202ENST00000420115 FHAD1B1AJZ9 1412 aa13.92□□□□□ -0.18
CDV3-202ENST00000420115 TONSLQ96HA7 1378 aa13.92□□□□□ -0.18
CDV3-202ENST00000420115 HNRNPUQ00839 825 aaKnown RBP eCLIP13.92□□□□□ -0.18
CDV3-202ENST00000420115 IGF1RP08069 1367 aa13.92□□□□□ -0.18
CDV3-202ENST00000420115 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.9□□□□□ -0.18
CDV3-202ENST00000420115 PCF11O94913 1555 aaKnown RBP13.88□□□□□ -0.19
CDV3-202ENST00000420115 HMGXB3Q12766 1538 aa13.88□□□□□ -0.19
CDV3-202ENST00000420115 CFTRP13569 1480 aa13.88□□□□□ -0.19
CDV3-202ENST00000420115 CARMIL1Q5VZK9 1371 aa13.86□□□□□ -0.19
CDV3-202ENST00000420115 BRPF3Q9ULD4 1205 aa13.86□□□□□ -0.19
CDV3-202ENST00000420115 NOP58Q9Y2X3 529 aaKnown RBP13.86□□□□□ -0.19
CDV3-202ENST00000420115 PPP4R2Q9NY27 417 aa13.85□□□□□ -0.19
CDV3-202ENST00000420115 NCAPD3P42695 1498 aa13.85□□□□□ -0.19
CDV3-202ENST00000420115 CCDC18Q5T9S5 1454 aa13.84□□□□□ -0.19
CDV3-202ENST00000420115 UACAQ9BZF9 1416 aa13.83□□□□□ -0.2
CDV3-202ENST00000420115 FYCO1Q9BQS8 1478 aa13.82□□□□□ -0.2
CDV3-202ENST00000420115 ATP1B4Q9UN42 357 aaPredicted RBP13.81□□□□□ -0.2
CDV3-202ENST00000420115 HFM1A2PYH4 1435 aa13.8□□□□□ -0.2
CDV3-202ENST00000420115 KDM5BQ9UGL1 1544 aa13.8□□□□□ -0.2
CDV3-202ENST00000420115 FGD6Q6ZV73 1430 aa13.8□□□□□ -0.2
CDV3-202ENST00000420115 P3H3Q8IVL6 736 aa13.79□□□□□ -0.2
CDV3-202ENST00000420115 FGD5Q6ZNL6 1462 aa13.78□□□□□ -0.2
CDV3-202ENST00000420115 WASHC2AQ641Q2 1341 aa13.78□□□□□ -0.2
CDV3-202ENST00000420115 CASKIN1Q8WXD9 1431 aa13.78□□□□□ -0.2
CDV3-202ENST00000420115 PTPN23Q9H3S7 1636 aa13.78□□□□□ -0.2
CDV3-202ENST00000420115 PRDM2Q13029 1718 aa13.78□□□□□ -0.2
CDV3-202ENST00000420115 AQRO60306 1485 aaKnown RBP eCLIP13.77□□□□□ -0.212e-11■■□□□ 14.3
CDV3-202ENST00000420115 FHOD3Q2V2M9 1422 aa13.77□□□□□ -0.21
CDV3-202ENST00000420115 PTPRKQ15262 1439 aa13.75□□□□□ -0.21
CDV3-202ENST00000420115 NCOA2Q15596 1464 aa13.75□□□□□ -0.21
CDV3-202ENST00000420115 HSPA5P11021 654 aaKnown RBP13.75□□□□□ -0.21
CDV3-202ENST00000420115 EFCAB5A4FU69 1503 aa13.74□□□□□ -0.21
CDV3-202ENST00000420115 B4GALNT3Q6L9W6 998 aa13.74□□□□□ -0.21
CDV3-202ENST00000420115 NAIPQ13075 1403 aa13.73□□□□□ -0.21
CDV3-202ENST00000420115 CNTLNQ9NXG0 1405 aa13.73□□□□□ -0.21
CDV3-202ENST00000420115 CCDC184Q52MB2 194 aa13.73□□□□□ -0.21
CDV3-202ENST00000420115 LAS1LQ9Y4W2 734 aaKnown RBP13.72□□□□□ -0.21
CDV3-202ENST00000420115 ZBED9Q6R2W3 1325 aa13.72□□□□□ -0.21
CDV3-202ENST00000420115 GLIPR1L2Q4G1C9 344 aa13.71□□□□□ -0.21
CDV3-202ENST00000420115 EIF4G2P78344 907 aaKnown RBP eCLIP13.7□□□□□ -0.22
CDV3-202ENST00000420115 PDE4CQ08493 712 aa13.7□□□□□ -0.22
CDV3-202ENST00000420115 FMN1Q68DA7 1419 aa13.7□□□□□ -0.22
CDV3-202ENST00000420115 PRKRIP1Q9H875 184 aaPredicted RBP13.69□□□□□ -0.22
CDV3-202ENST00000420115 FAM9BQ8IZU0 186 aa13.69□□□□□ -0.22
CDV3-202ENST00000420115 MTUS2Q5JR59 1369 aa13.69□□□□□ -0.22
CDV3-202ENST00000420115 RBM10P98175 930 aaKnown RBP13.68□□□□□ -0.22
CDV3-202ENST00000420115 C11orf95C9JLR9 678 aaPredicted RBP13.68□□□□□ -0.22
CDV3-202ENST00000420115 MRS2Q9HD23 443 aa13.67□□□□□ -0.22
CDV3-202ENST00000420115 BCL11BQ9C0K0 894 aaPredicted RBP13.67□□□□□ -0.22
CDV3-202ENST00000420115 SNAPC4Q5SXM2 1469 aa13.66□□□□□ -0.22
CDV3-202ENST00000420115 MYOM3Q5VTT5 1437 aa13.65□□□□□ -0.22
CDV3-202ENST00000420115 NCOA1Q15788 1441 aa13.65□□□□□ -0.22
CDV3-202ENST00000420115 CCDC7Q96M83 1385 aa13.65□□□□□ -0.22
CDV3-202ENST00000420115 NEFMP07197 916 aa13.64□□□□□ -0.23
CDV3-202ENST00000420115 CTTNBP2Q8WZ74 1663 aa13.63□□□□□ -0.23
CDV3-202ENST00000420115 HECW1Q76N89 1606 aa13.63□□□□□ -0.23
CDV3-202ENST00000420115 CADPSQ9ULU8 1353 aa13.63□□□□□ -0.23
CDV3-202ENST00000420115 DENND4BO75064 1496 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms