RNA–Protein interactions for RNA: ENST00000419241.1

ITSN1-214, Transcript of intersectin 1, humanhuman

TSL 5

Gene ITSN1, Length 779 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-214ENST00000419241 NUP160Q12769 1436 aa13.76□□□□□ -0.21
ITSN1-214ENST00000419241 SHROOM2Q13796 1616 aa13.75□□□□□ -0.21
ITSN1-214ENST00000419241 GRIN2AQ12879 1464 aa13.75□□□□□ -0.21
ITSN1-214ENST00000419241 TSPOAP1O95153 1857 aa13.74□□□□□ -0.21
ITSN1-214ENST00000419241 PBRM1Q86U86 1689 aa13.73□□□□□ -0.21
ITSN1-214ENST00000419241 PRG4Q92954 1404 aaPredicted RBP13.71□□□□□ -0.22
ITSN1-214ENST00000419241 CHIC1Q5VXU3 224 aa13.66□□□□□ -0.22
ITSN1-214ENST00000419241 ADCY10Q96PN6 1610 aa13.65□□□□□ -0.22
ITSN1-214ENST00000419241 COL17A1Q9UMD9 1497 aaPredicted RBP13.64□□□□□ -0.23
ITSN1-214ENST00000419241 CUX1P39880 1505 aa13.64□□□□□ -0.23
ITSN1-214ENST00000419241 ABCA5Q8WWZ7 1642 aa13.63□□□□□ -0.23
ITSN1-214ENST00000419241 TOP2BQ02880 1626 aa13.62□□□□□ -0.23
ITSN1-214ENST00000419241 JPH4Q96JJ6 628 aa13.62□□□□□ -0.23
ITSN1-214ENST00000419241 ADAMTS12P58397 1594 aa13.61□□□□□ -0.23
ITSN1-214ENST00000419241 ABCA10Q8WWZ4 1543 aa13.59□□□□□ -0.23
ITSN1-214ENST00000419241 PPRC1Q5VV67 1664 aaKnown RBP13.58□□□□□ -0.24
ITSN1-214ENST00000419241 SPATA31D1Q6ZQQ2 1576 aa13.57□□□□□ -0.24
ITSN1-214ENST00000419241 FHAD1B1AJZ9 1412 aa13.56□□□□□ -0.24
ITSN1-214ENST00000419241 CERKQ8TCT0 537 aa13.55□□□□□ -0.24
ITSN1-214ENST00000419241 GLI2P10070 1586 aa13.51□□□□□ -0.25
ITSN1-214ENST00000419241 ASXL2Q76L83 1435 aa13.47□□□□□ -0.25
ITSN1-214ENST00000419241 PLB1Q6P1J6 1458 aa13.47□□□□□ -0.25
ITSN1-214ENST00000419241 PCF11O94913 1555 aaKnown RBP13.46□□□□□ -0.25
ITSN1-214ENST00000419241 TEX14Q8IWB6 1497 aa13.46□□□□□ -0.25
ITSN1-214ENST00000419241 PTPRMP28827 1452 aa13.45□□□□□ -0.26
ITSN1-214ENST00000419241 RUSC2Q8N2Y8 1516 aa13.44□□□□□ -0.26
ITSN1-214ENST00000419241 ABCC2Q92887 1545 aa13.42□□□□□ -0.26
ITSN1-214ENST00000419241 MAP3K4Q9Y6R4 1608 aa13.39□□□□□ -0.27
ITSN1-214ENST00000419241 EPRSP07814 1512 aaKnown RBP13.39□□□□□ -0.27
ITSN1-214ENST00000419241 ERICH3Q5RHP9 1530 aa13.39□□□□□ -0.27
ITSN1-214ENST00000419241 HSPA2P54652 639 aa13.37□□□□□ -0.27
ITSN1-214ENST00000419241 KIF21BO75037 1637 aa13.37□□□□□ -0.27
ITSN1-214ENST00000419241 PTPRGP23470 1445 aa13.37□□□□□ -0.27
ITSN1-214ENST00000419241 WRNQ14191 1432 aaPredicted RBP eCLIP13.36□□□□□ -0.27
ITSN1-214ENST00000419241 TTBK1Q5TCY1 1321 aaPredicted RBP13.35□□□□□ -0.27
ITSN1-214ENST00000419241 ADAMTSL3P82987 1691 aa13.32□□□□□ -0.28
ITSN1-214ENST00000419241 KIAA0586Q9BVV6 1533 aa13.32□□□□□ -0.28
ITSN1-214ENST00000419241 CUL7Q14999 1698 aa13.28□□□□□ -0.28
ITSN1-214ENST00000419241 UHRF1BP1LA0JNW5 1464 aa13.27□□□□□ -0.29
ITSN1-214ENST00000419241 TNIKQ9UKE5 1360 aa13.26□□□□□ -0.29
ITSN1-214ENST00000419241 BIVM-ERCC5R4GMW8 1640 aa13.24□□□□□ -0.29
ITSN1-214ENST00000419241 UACAQ9BZF9 1416 aa13.23□□□□□ -0.29
ITSN1-214ENST00000419241 MADDQ8WXG6 1647 aa13.23□□□□□ -0.29
ITSN1-214ENST00000419241 MAGI3Q5TCQ9 1506 aa13.23□□□□□ -0.29
ITSN1-214ENST00000419241 KDM5BQ9UGL1 1544 aa13.22□□□□□ -0.29
ITSN1-214ENST00000419241 CD109Q6YHK3 1445 aa13.22□□□□□ -0.29
ITSN1-214ENST00000419241 CARMIL2Q6F5E8 1435 aa13.19□□□□□ -0.3
ITSN1-214ENST00000419241 BCORL1Q5H9F3 1711 aa13.19□□□□□ -0.3
ITSN1-214ENST00000419241 WDR7Q9Y4E6 1490 aa13.17□□□□□ -0.3
ITSN1-214ENST00000419241 ARID4BQ4LE39 1312 aaPredicted RBP13.17□□□□□ -0.3
ITSN1-214ENST00000419241 PLPPR3Q6T4P5 718 aa13.17□□□□□ -0.3
ITSN1-214ENST00000419241 ZCCHC11Q5TAX3 1644 aaKnown RBP13.15□□□□□ -0.3
ITSN1-214ENST00000419241 ARAP3Q8WWN8 1544 aa13.14□□□□□ -0.31
ITSN1-214ENST00000419241 RIMS1Q86UR5 1692 aaKnown RBP13.13□□□□□ -0.31
ITSN1-214ENST00000419241 DMRT2Q9Y5R5 561 aa13.12□□□□□ -0.31
ITSN1-214ENST00000419241 YEATS2Q9ULM3 1422 aa13.11□□□□□ -0.31
ITSN1-214ENST00000419241 CFAP43Q8NDM7 1665 aa13.11□□□□□ -0.31
ITSN1-214ENST00000419241 KCNH8Q96L42 1107 aa13.1□□□□□ -0.31
ITSN1-214ENST00000419241 RAPGEF3O95398 923 aa13.08□□□□□ -0.32
ITSN1-214ENST00000419241 IQSEC2Q5JU85 1478 aa13.06□□□□□ -0.32
ITSN1-214ENST00000419241 MED1Q15648 1581 aaPredicted RBP13.04□□□□□ -0.32
ITSN1-214ENST00000419241 DISP1Q96F81 1524 aa13.03□□□□□ -0.32
ITSN1-214ENST00000419241 LTBP4Q8N2S1 1624 aa13.02□□□□□ -0.32
ITSN1-214ENST00000419241 IGF1RP08069 1367 aa13.02□□□□□ -0.33
ITSN1-214ENST00000419241 PHLDB1Q86UU1 1377 aa13.02□□□□□ -0.33
ITSN1-214ENST00000419241 STRCQ7RTU9 1775 aa13.01□□□□□ -0.33
ITSN1-214ENST00000419241 PTPRTO14522 1441 aa13□□□□□ -0.33
ITSN1-214ENST00000419241 IQGAP2Q13576 1575 aa12.99□□□□□ -0.33
ITSN1-214ENST00000419241 UBAP1LF5GYI3 381 aa12.99□□□□□ -0.33
ITSN1-214ENST00000419241 POGZQ7Z3K3 1410 aa12.98□□□□□ -0.33
ITSN1-214ENST00000419241 FRMPD1Q5SYB0 1578 aa12.98□□□□□ -0.33
ITSN1-214ENST00000419241 ARHGEF40Q8TER5 1519 aa12.98□□□□□ -0.33
ITSN1-214ENST00000419241 PHF23Q9BUL5 403 aaPredicted RBP12.96□□□□□ -0.33
ITSN1-214ENST00000419241 PREX1Q8TCU6 1659 aa12.95□□□□□ -0.34
ITSN1-214ENST00000419241 FANCAO15360 1455 aa12.94□□□□□ -0.34
ITSN1-214ENST00000419241 KIF27Q86VH2 1401 aa12.94□□□□□ -0.34
ITSN1-214ENST00000419241 TTC37Q6PGP7 1564 aa12.94□□□□□ -0.34
ITSN1-214ENST00000419241 MLECQ14165 292 aa12.93□□□□□ -0.34
ITSN1-214ENST00000419241 NEO1Q92859 1461 aa12.92□□□□□ -0.34
ITSN1-214ENST00000419241 HSPA1LP34931 641 aa12.92□□□□□ -0.34
ITSN1-214ENST00000419241 UHRF1BP1Q6BDS2 1440 aa12.92□□□□□ -0.34
ITSN1-214ENST00000419241 CARMIL1Q5VZK9 1371 aa12.91□□□□□ -0.34
ITSN1-214ENST00000419241 AKNAQ7Z591 1439 aa12.9□□□□□ -0.34
ITSN1-214ENST00000419241 CEBPAP49715 358 aaPredicted RBP12.9□□□□□ -0.34
ITSN1-214ENST00000419241 FAM9AQ8IZU1 332 aaPredicted RBP12.9□□□□□ -0.34
ITSN1-214ENST00000419241 UGGT2Q9NYU1 1516 aa12.89□□□□□ -0.35
ITSN1-214ENST00000419241 KIAA0556O60303 1618 aa12.89□□□□□ -0.35
ITSN1-214ENST00000419241 FER1L4A9Z1Z3 1794 aa12.87□□□□□ -0.35
ITSN1-214ENST00000419241 SIGLEC1Q9BZZ2 1709 aa12.85□□□□□ -0.35
ITSN1-214ENST00000419241 ABCA9Q8IUA7 1624 aa12.85□□□□□ -0.35
ITSN1-214ENST00000419241 ABCA8O94911 1581 aa12.85□□□□□ -0.35
ITSN1-214ENST00000419241 SCAF1Q9H7N4 1312 aaKnown RBP12.85□□□□□ -0.35
ITSN1-214ENST00000419241 DENND4BO75064 1496 aaPredicted RBP12.85□□□□□ -0.35
ITSN1-214ENST00000419241 EEA1Q15075 1411 aa12.84□□□□□ -0.35
ITSN1-214ENST00000419241 ZNF335Q9H4Z2 1342 aaPredicted RBP12.84□□□□□ -0.35
ITSN1-214ENST00000419241 ARHGEF12Q9NZN5 1544 aa12.83□□□□□ -0.35
ITSN1-214ENST00000419241 FHOD3Q2V2M9 1422 aa12.83□□□□□ -0.36
ITSN1-214ENST00000419241 NCOA1Q15788 1441 aa12.82□□□□□ -0.36
ITSN1-214ENST00000419241 ZFYVE16Q7Z3T8 1539 aa12.82□□□□□ -0.36
ITSN1-214ENST00000419241 ARID3CA6NKF2 412 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 403.4 ms