RNA–Protein interactions for RNA: ENST00000417996.2

KRT3-201, Transcript of keratin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT3, Length 2,319 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3-201ENST00000417996 DNMBPQ6XZF7 1577 aa29.78■■■□□ 2.36
KRT3-201ENST00000417996 RAB3GAP2Q9H2M9 1393 aa29.75■■■□□ 2.35
KRT3-201ENST00000417996 FHAD1B1AJZ9 1412 aa29.74■■■□□ 2.35
KRT3-201ENST00000417996 NESP48681 1621 aa29.74■■■□□ 2.35
KRT3-201ENST00000417996 ATP1B4Q9UN42 357 aaPredicted RBP29.74■■■□□ 2.35
KRT3-201ENST00000417996 TOPBP1Q92547 1522 aa29.73■■■□□ 2.35
KRT3-201ENST00000417996 POLA1P09884 1462 aaPredicted RBP29.73■■■□□ 2.35
KRT3-201ENST00000417996 PHLDB1Q86UU1 1377 aa29.72■■■□□ 2.35
KRT3-201ENST00000417996 PCF11O94913 1555 aaKnown RBP29.72■■■□□ 2.35
KRT3-201ENST00000417996 ABCA10Q8WWZ4 1543 aa29.71■■■□□ 2.35
KRT3-201ENST00000417996 FHOD3Q2V2M9 1422 aa29.68■■■□□ 2.34
KRT3-201ENST00000417996 CFAP43Q8NDM7 1665 aa29.66■■■□□ 2.34
KRT3-201ENST00000417996 FAM50AQ14320 339 aaKnown RBP29.66■■■□□ 2.34
KRT3-201ENST00000417996 SETD5Q9C0A6 1442 aa29.62■■■□□ 2.33
KRT3-201ENST00000417996 MAPKBP1O60336 1514 aa29.61■■■□□ 2.33
KRT3-201ENST00000417996 CUL7Q14999 1698 aa29.57■■■□□ 2.32
KRT3-201ENST00000417996 EFCAB5A4FU69 1503 aa29.55■■■□□ 2.32
KRT3-201ENST00000417996 FYCO1Q9BQS8 1478 aa29.54■■■□□ 2.32
KRT3-201ENST00000417996 CTTNBP2Q8WZ74 1663 aa29.52■■■□□ 2.32
KRT3-201ENST00000417996 DNAJC5BQ9UF47 199 aa29.51■■■□□ 2.31
KRT3-201ENST00000417996 CASKIN1Q8WXD9 1431 aa29.51■■■□□ 2.31
KRT3-201ENST00000417996 URB2Q14146 1524 aaKnown RBP29.49■■■□□ 2.31
KRT3-201ENST00000417996 AQRO60306 1485 aaKnown RBP eCLIP29.45■■■□□ 2.31
KRT3-201ENST00000417996 LAMC3Q9Y6N6 1575 aa29.45■■■□□ 2.3
KRT3-201ENST00000417996 WDR97A6NE52 1622 aa29.44■■■□□ 2.3
KRT3-201ENST00000417996 TDRD9Q8NDG6 1382 aaKnown RBP29.43■■■□□ 2.3
KRT3-201ENST00000417996 SIN3AQ96ST3 1273 aa29.43■■■□□ 2.3
KRT3-201ENST00000417996 FMN1Q68DA7 1419 aa29.4■■■□□ 2.3
KRT3-201ENST00000417996 SNAPC4Q5SXM2 1469 aa29.35■■■□□ 2.29
KRT3-201ENST00000417996 ABCA5Q8WWZ7 1642 aa29.35■■■□□ 2.29
KRT3-201ENST00000417996 GAPVD1Q14C86 1478 aa29.33■■■□□ 2.29
KRT3-201ENST00000417996 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.32■■■□□ 2.28
KRT3-201ENST00000417996 MTUS2Q5JR59 1369 aa29.31■■■□□ 2.28
KRT3-201ENST00000417996 FGD6Q6ZV73 1430 aa29.3■■■□□ 2.28
KRT3-201ENST00000417996 PDS5BQ9NTI5 1447 aa29.28■■■□□ 2.28
KRT3-201ENST00000417996 SAMD9Q5K651 1589 aa29.28■■■□□ 2.28
KRT3-201ENST00000417996 LRRIQ1Q96JM4 1722 aa29.23■■■□□ 2.27
KRT3-201ENST00000417996 KIF21AQ7Z4S6 1674 aa29.21■■■□□ 2.27
KRT3-201ENST00000417996 GRIN2BQ13224 1484 aa29.18■■■□□ 2.26
KRT3-201ENST00000417996 TIMELESSQ9UNS1 1208 aa29.18■■■□□ 2.26
KRT3-201ENST00000417996 KCNH8Q96L42 1107 aa29.17■■■□□ 2.26
KRT3-201ENST00000417996 PTPRKQ15262 1439 aa29.17■■■□□ 2.26
KRT3-201ENST00000417996 DDX10Q13206 875 aaKnown RBP29.16■■■□□ 2.26
KRT3-201ENST00000417996 NCOA2Q15596 1464 aa29.16■■■□□ 2.26
KRT3-201ENST00000417996 CCDC18Q5T9S5 1454 aa29.15■■■□□ 2.26
KRT3-201ENST00000417996 PPP1R15AO75807 674 aaPredicted RBP29.12■■■□□ 2.25
KRT3-201ENST00000417996 MYOM3Q5VTT5 1437 aa29.12■■■□□ 2.25
KRT3-201ENST00000417996 HIRIP3Q9BW71 556 aaPredicted RBP29.11■■■□□ 2.25
KRT3-201ENST00000417996 TARBP1Q13395 1621 aaKnown RBP29.1■■■□□ 2.25
KRT3-201ENST00000417996 HFM1A2PYH4 1435 aa29.1■■■□□ 2.25
KRT3-201ENST00000417996 SUPT6HQ7KZ85 1726 aaKnown RBP29.09■■■□□ 2.25
KRT3-201ENST00000417996 THOC2Q8NI27 1593 aaKnown RBP29.09■■■□□ 2.25
KRT3-201ENST00000417996 PTPN23Q9H3S7 1636 aa29.08■■■□□ 2.25
KRT3-201ENST00000417996 EHBP1L1Q8N3D4 1523 aa29.07■■■□□ 2.24
KRT3-201ENST00000417996 SUPT16HQ9Y5B9 1047 aaKnown RBP29.05■■■□□ 2.24
KRT3-201ENST00000417996 UACAQ9BZF9 1416 aa29.04■■■□□ 2.24
KRT3-201ENST00000417996 TONSLQ96HA7 1378 aa29.04■■■□□ 2.24
KRT3-201ENST00000417996 NAIPQ13075 1403 aa29.02■■■□□ 2.24
KRT3-201ENST00000417996 MAGI3Q5TCQ9 1506 aa29.01■■■□□ 2.24
KRT3-201ENST00000417996 PBRM1Q86U86 1689 aa29■■■□□ 2.23
KRT3-201ENST00000417996 UGGT2Q9NYU1 1516 aa28.99■■■□□ 2.23
KRT3-201ENST00000417996 ARHGEF11O15085 1522 aa28.94■■■□□ 2.22
KRT3-201ENST00000417996 IQGAP2Q13576 1575 aa28.93■■■□□ 2.22
KRT3-201ENST00000417996 RRP7BPQ9NSQ0 103 aa28.92■■■□□ 2.22
KRT3-201ENST00000417996 CHIC2Q9UKJ5 165 aa28.92■■■□□ 2.22
KRT3-201ENST00000417996 HECW1Q76N89 1606 aa28.92■■■□□ 2.22
KRT3-201ENST00000417996 ADAMTS12P58397 1594 aa28.9■■■□□ 2.22
KRT3-201ENST00000417996 ARID3CA6NKF2 412 aa28.89■■■□□ 2.22
KRT3-201ENST00000417996 EPRSP07814 1512 aaKnown RBP28.87■■■□□ 2.21
KRT3-201ENST00000417996 CDK13Q14004 1512 aaKnown RBP28.85■■■□□ 2.21
KRT3-201ENST00000417996 TCOF1Q13428 1488 aaKnown RBP28.84■■■□□ 2.21
KRT3-201ENST00000417996 MRC2Q9UBG0 1479 aa28.84■■■□□ 2.21
KRT3-201ENST00000417996 ANP32CO43423 234 aa28.83■■■□□ 2.21
KRT3-201ENST00000417996 TRIM52Q96A61 297 aa28.8■■■□□ 2.2
KRT3-201ENST00000417996 WDR62O43379 1518 aa28.78■■■□□ 2.2
KRT3-201ENST00000417996 GCC2Q8IWJ2 1684 aa28.77■■■□□ 2.2
KRT3-201ENST00000417996 KDM5BQ9UGL1 1544 aa28.76■■■□□ 2.19
KRT3-201ENST00000417996 CCER2I3L3R5 266 aa28.76■■■□□ 2.19
KRT3-201ENST00000417996 KDM6BO15054 1643 aa28.75■■■□□ 2.19
KRT3-201ENST00000417996 ZNF608Q9ULD9 1512 aaPredicted RBP28.74■■■□□ 2.19
KRT3-201ENST00000417996 MIA2Q96PC5 1412 aa28.72■■■□□ 2.19
KRT3-201ENST00000417996 DENND4BO75064 1496 aaPredicted RBP28.71■■■□□ 2.19
KRT3-201ENST00000417996 AKNAQ7Z591 1439 aa28.69■■■□□ 2.18
KRT3-201ENST00000417996 IFT140Q96RY7 1462 aa28.66■■■□□ 2.18
KRT3-201ENST00000417996 MPHOSPH9Q99550 1183 aa28.65■■■□□ 2.18
KRT3-201ENST00000417996 BCANQ96GW7 911 aa28.63■■■□□ 2.17
KRT3-201ENST00000417996 KIAA0556O60303 1618 aa28.62■■■□□ 2.17
KRT3-201ENST00000417996 FOXD1Q16676 465 aa28.61■■■□□ 2.17
KRT3-201ENST00000417996 DISP1Q96F81 1524 aa28.61■■■□□ 2.17
KRT3-201ENST00000417996 KIAA0586Q9BVV6 1533 aa28.61■■■□□ 2.17
KRT3-201ENST00000417996 FKBP8Q14318 412 aa28.61■■■□□ 2.17
KRT3-201ENST00000417996 HSPA5P11021 654 aaKnown RBP28.59■■■□□ 2.17
KRT3-201ENST00000417996 DAPK1P53355 1430 aa28.57■■■□□ 2.16
KRT3-201ENST00000417996 NUP153P49790 1475 aaKnown RBP28.57■■■□□ 2.16
KRT3-201ENST00000417996 ZNF644Q9H582 1327 aaPredicted RBP28.56■■■□□ 2.16
KRT3-201ENST00000417996 L3MBTL2Q969R5 705 aa28.53■■■□□ 2.16
KRT3-201ENST00000417996 GRIN2AQ12879 1464 aa28.53■■■□□ 2.16
KRT3-201ENST00000417996 WASHC2AQ641Q2 1341 aa28.53■■■□□ 2.16
KRT3-201ENST00000417996 RAPGEF6Q8TEU7 1601 aa28.53■■■□□ 2.16
KRT3-201ENST00000417996 TSHZ2Q9NRE2 1034 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms