RNA–Protein interactions for RNA: ENST00000417641.6

VRK2-203, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK2, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-203ENST00000417641 SETD5Q9C0A6 1442 aa11.17□□□□□ -0.62
VRK2-203ENST00000417641 PABPN1Q86U42 306 aaKnown RBP eCLIP11.17□□□□□ -0.62
VRK2-203ENST00000417641 MSH5O43196 834 aa11.16□□□□□ -0.62
VRK2-203ENST00000417641 TIMELESSQ9UNS1 1208 aa11.16□□□□□ -0.62
VRK2-203ENST00000417641 CUX1P39880 1505 aa11.14□□□□□ -0.63
VRK2-203ENST00000417641 TIAM1Q13009 1591 aa11.13□□□□□ -0.63
VRK2-203ENST00000417641 KIF27Q86VH2 1401 aa11.13□□□□□ -0.63
VRK2-203ENST00000417641 SIN3AQ96ST3 1273 aa11.12□□□□□ -0.63
VRK2-203ENST00000417641 NEFLP07196 543 aa11.11□□□□□ -0.63
VRK2-203ENST00000417641 ITGAEP38570 1179 aa11.11□□□□□ -0.63
VRK2-203ENST00000417641 FANCIQ9NVI1 1328 aa11.11□□□□□ -0.63
VRK2-203ENST00000417641 LRRC9Q6ZRR7 1453 aa11.1□□□□□ -0.63
VRK2-203ENST00000417641 PHLDB1Q86UU1 1377 aa11.09□□□□□ -0.63
VRK2-203ENST00000417641 TRIM52Q96A61 297 aa11.08□□□□□ -0.64
VRK2-203ENST00000417641 ANP32CO43423 234 aa11.06□□□□□ -0.64
VRK2-203ENST00000417641 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.04□□□□□ -0.64
VRK2-203ENST00000417641 IGF1RP08069 1367 aa11.03□□□□□ -0.64
VRK2-203ENST00000417641 HIRIP3Q9BW71 556 aaPredicted RBP11.02□□□□□ -0.65
VRK2-203ENST00000417641 CFAP43Q8NDM7 1665 aa11.02□□□□□ -0.65
VRK2-203ENST00000417641 CFTRP13569 1480 aa11□□□□□ -0.65
VRK2-203ENST00000417641 ERICH6BQ5W0A0 696 aa10.99□□□□□ -0.65
VRK2-203ENST00000417641 HMGXB3Q12766 1538 aa10.99□□□□□ -0.65
VRK2-203ENST00000417641 KDM5BQ9UGL1 1544 aa10.99□□□□□ -0.65
VRK2-203ENST00000417641 NCAPD3P42695 1498 aa10.99□□□□□ -0.65
VRK2-203ENST00000417641 FHAD1B1AJZ9 1412 aa10.98□□□□□ -0.65
VRK2-203ENST00000417641 CDK11AQ9UQ88 783 aaPredicted RBP10.97□□□□□ -0.65
VRK2-203ENST00000417641 FAM50AQ14320 339 aaKnown RBP10.97□□□□□ -0.65
VRK2-203ENST00000417641 PCF11O94913 1555 aaKnown RBP10.96□□□□□ -0.65
VRK2-203ENST00000417641 CARMIL1Q5VZK9 1371 aa10.95□□□□□ -0.66
VRK2-203ENST00000417641 MYT1LQ9UL68 1186 aa10.94□□□□□ -0.66
VRK2-203ENST00000417641 UACAQ9BZF9 1416 aa10.93□□□□□ -0.66
VRK2-203ENST00000417641 TONSLQ96HA7 1378 aa10.93□□□□□ -0.66
VRK2-203ENST00000417641 HNRNPUQ00839 825 aaKnown RBP eCLIP10.93□□□□□ -0.66
VRK2-203ENST00000417641 PPP4R2Q9NY27 417 aa10.93□□□□□ -0.66
VRK2-203ENST00000417641 AQRO60306 1485 aaKnown RBP eCLIP10.92□□□□□ -0.667e-6■□□□□ 9.9
VRK2-203ENST00000417641 HFM1A2PYH4 1435 aa10.92□□□□□ -0.66
VRK2-203ENST00000417641 PTPRKQ15262 1439 aa10.92□□□□□ -0.66
VRK2-203ENST00000417641 CCDC18Q5T9S5 1454 aa10.91□□□□□ -0.66
VRK2-203ENST00000417641 FGD5Q6ZNL6 1462 aa10.91□□□□□ -0.66
VRK2-203ENST00000417641 FYCO1Q9BQS8 1478 aa10.91□□□□□ -0.66
VRK2-203ENST00000417641 IRX6P78412 446 aaPredicted RBP10.91□□□□□ -0.66
VRK2-203ENST00000417641 CASKIN1Q8WXD9 1431 aa10.91□□□□□ -0.66
VRK2-203ENST00000417641 NCOA2Q15596 1464 aa10.91□□□□□ -0.66
VRK2-203ENST00000417641 FGD6Q6ZV73 1430 aa10.9□□□□□ -0.66
VRK2-203ENST00000417641 WASHC2AQ641Q2 1341 aa10.89□□□□□ -0.67
VRK2-203ENST00000417641 PTPN23Q9H3S7 1636 aa10.89□□□□□ -0.67
VRK2-203ENST00000417641 ERICH6Q7L0X2 663 aa10.88□□□□□ -0.67
VRK2-203ENST00000417641 NAIPQ13075 1403 aa10.87□□□□□ -0.67
VRK2-203ENST00000417641 CCDC184Q52MB2 194 aa10.87□□□□□ -0.67
VRK2-203ENST00000417641 EFCAB5A4FU69 1503 aa10.86□□□□□ -0.67
VRK2-203ENST00000417641 DEKP35659 375 aaKnown RBP10.86□□□□□ -0.67
VRK2-203ENST00000417641 PRDM2Q13029 1718 aa10.86□□□□□ -0.67
VRK2-203ENST00000417641 FHOD3Q2V2M9 1422 aa10.86□□□□□ -0.67
VRK2-203ENST00000417641 PLPPR3Q6T4P5 718 aa10.85□□□□□ -0.67
VRK2-203ENST00000417641 CNTLNQ9NXG0 1405 aa10.85□□□□□ -0.67
VRK2-203ENST00000417641 HSPA5P11021 654 aaKnown RBP10.85□□□□□ -0.67
VRK2-203ENST00000417641 DENND4BO75064 1496 aaPredicted RBP10.84□□□□□ -0.67
VRK2-203ENST00000417641 SNAPC4Q5SXM2 1469 aa10.83□□□□□ -0.68
VRK2-203ENST00000417641 P3H3Q8IVL6 736 aa10.83□□□□□ -0.68
VRK2-203ENST00000417641 ZBED9Q6R2W3 1325 aa10.83□□□□□ -0.68
VRK2-203ENST00000417641 NCOA1Q15788 1441 aa10.81□□□□□ -0.68
VRK2-203ENST00000417641 B4GALNT3Q6L9W6 998 aa10.81□□□□□ -0.68
VRK2-203ENST00000417641 PRKRIP1Q9H875 184 aaPredicted RBP10.81□□□□□ -0.68
VRK2-203ENST00000417641 NOP58Q9Y2X3 529 aaKnown RBP10.81□□□□□ -0.68
VRK2-203ENST00000417641 FMN1Q68DA7 1419 aa10.8□□□□□ -0.68
VRK2-203ENST00000417641 C11orf95C9JLR9 678 aaPredicted RBP10.8□□□□□ -0.68
VRK2-203ENST00000417641 PAK3O75914 559 aaPredicted RBP10.79□□□□□ -0.68
VRK2-203ENST00000417641 MYOM3Q5VTT5 1437 aa10.79□□□□□ -0.68
VRK2-203ENST00000417641 CCDC7Q96M83 1385 aa10.79□□□□□ -0.68
VRK2-203ENST00000417641 RNF123Q5XPI4 1314 aa10.79□□□□□ -0.68
VRK2-203ENST00000417641 EIF4G2P78344 907 aaKnown RBP eCLIP10.79□□□□□ -0.68
VRK2-203ENST00000417641 CADPSQ9ULU8 1353 aa10.78□□□□□ -0.68
VRK2-203ENST00000417641 ARHGEF11O15085 1522 aa10.78□□□□□ -0.68
VRK2-203ENST00000417641 ATP1B4Q9UN42 357 aaPredicted RBP10.77□□□□□ -0.68
VRK2-203ENST00000417641 HECW1Q76N89 1606 aa10.77□□□□□ -0.69
VRK2-203ENST00000417641 SMG6Q86US8 1419 aaKnown RBP10.76□□□□□ -0.69
VRK2-203ENST00000417641 AKNAQ7Z591 1439 aa10.75□□□□□ -0.69
VRK2-203ENST00000417641 ABCA10Q8WWZ4 1543 aa10.75□□□□□ -0.69
VRK2-203ENST00000417641 LRRIQ1Q96JM4 1722 aa10.75□□□□□ -0.69
VRK2-203ENST00000417641 MTUS2Q5JR59 1369 aa10.75□□□□□ -0.69
VRK2-203ENST00000417641 GRIN2BQ13224 1484 aa10.75□□□□□ -0.69
VRK2-203ENST00000417641 TCOF1Q13428 1488 aaKnown RBP10.75□□□□□ -0.69
VRK2-203ENST00000417641 ABCA5Q8WWZ7 1642 aa10.75□□□□□ -0.69
VRK2-203ENST00000417641 SPATA31E1Q6ZUB1 1445 aa10.75□□□□□ -0.69
VRK2-203ENST00000417641 CC2D2AQ9P2K1 1620 aa10.74□□□□□ -0.69
VRK2-203ENST00000417641 UGGT2Q9NYU1 1516 aa10.74□□□□□ -0.69
VRK2-203ENST00000417641 GCC2Q8IWJ2 1684 aa10.74□□□□□ -0.69
VRK2-203ENST00000417641 PRKCSHP14314 528 aaPredicted RBP10.74□□□□□ -0.69
VRK2-203ENST00000417641 FAM9BQ8IZU0 186 aa10.74□□□□□ -0.69
VRK2-203ENST00000417641 MRS2Q9HD23 443 aa10.74□□□□□ -0.69
VRK2-203ENST00000417641 CTTNBP2Q8WZ74 1663 aa10.74□□□□□ -0.69
VRK2-203ENST00000417641 SAMD9Q5K651 1589 aa10.73□□□□□ -0.69
VRK2-203ENST00000417641 THOC2Q8NI27 1593 aaKnown RBP10.73□□□□□ -0.69
VRK2-203ENST00000417641 CUL7Q14999 1698 aa10.73□□□□□ -0.69
VRK2-203ENST00000417641 EHBP1L1Q8N3D4 1523 aa10.72□□□□□ -0.69
VRK2-203ENST00000417641 L3MBTL2Q969R5 705 aa10.72□□□□□ -0.69
VRK2-203ENST00000417641 KDM6BO15054 1643 aa10.72□□□□□ -0.69
VRK2-203ENST00000417641 IPO9Q96P70 1041 aaKnown RBP10.72□□□□□ -0.69
VRK2-203ENST00000417641 SUPT6HQ7KZ85 1726 aaKnown RBP10.71□□□□□ -0.69
VRK2-203ENST00000417641 RAD54L2Q9Y4B4 1467 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms